Lineus longissimus (bootlace worm): 135489729
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Entry
135489729 CDS
T09977
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135489729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135489729
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135489729
mRNA degradation factors
5'-3' decay
Lsm complex
135489729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
135489729
NCBI-ProteinID:
XP_064631295
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All DBs
Position
6:19992243..19995017
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AA seq
136 aa
AA seq
DB search
MTQNYLPGTASLIEEIDKKLLIVLRDGRTLIGWLRSVDQFANLVLQGTIERIHVGKKYGD
IPRGIFVVRGENVVLLGEIDLDKEKEKTQLDEVPIDEILELQRQELHTKQEAEERKKTAM
LDRGLVYHAEGLADDL
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaaactacttaccagggactgctagtctgatagaagaaatagacaaaaagcta
ctgattgtcttgcgagatgggagaactctcataggatggctgaggagtgttgaccaattt
gccaatcttgttctgcagggaaccatagagcgcatccatgttggaaaaaagtatggagat
atcccacggggtatatttgtggtgcgtggagaaaatgttgttcttcttggagagatagat
ctggataaagagaaagagaaaacacagcttgatgaggtgccaatagatgaaattctggaa
ctgcaacgacaagaactacacacaaaacaggaggctgaggaacggaaaaaaacagctatg
ttggaccgaggactggtctatcatgctgagggtttagcagacgatctttga
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