Lineus longissimus (bootlace worm): 135490413 Help Entry 135490413         CDS       T09977                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism llon  Lineus longissimus (bootlace worm) Pathway llon03030   DNA replication llon03410   Base excision repair llon03420   Nucleotide excision repair llon03430   Mismatch repair Brite KEGG Orthology (KO) [BR:llon00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     135490413    03410 Base excision repair     135490413    03420 Nucleotide excision repair     135490413    03430 Mismatch repair     135490413  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:llon03032]     135490413    03400 DNA repair and recombination proteins [BR:llon03400]     135490413 Enzymes [BR:llon01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      135490413     6.5.1.6  DNA ligase (ATP or NAD+)      135490413     6.5.1.7  DNA ligase (ATP, ADP or GTP)      135490413 DNA replication proteins [BR:llon03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     135490413  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      135490413 DNA repair and recombination proteins [BR:llon03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      135490413    NER (nucleotide excision repair)     Other NER factors      135490413    MMR (mismatch excision repair)     Other MMR factors      135490413 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  135490413 NCBI-ProteinID:  XP_064631815 LinkDB All DBs Position 1:19323456..19353667 Genome browser AA seq 1092 aa AA seqDB search MPQPSITSFFSPPKPKAKPASDPGDGDKKKPPKTPEKVNKSGAAGIDFPVDTVGEVDSPI KVSTKKRARRVIESDSEDDCEVVVKSPVKDDNQNEETVLPIKQKAQKVTPAKQPQTPNAK ASPMPTRPPDSPQLMSPTTGLPLRKTARKSFSYGTKRKAESSSQDSGIGEETPSKKTRVS TSPRKKCESNDVDMKDAMVEEKNGSSPAKEEIMEAEQSESTEVGREESKKEDESDGDKSE KKPTSSGKGAFMNFFGGKSQTQAKKSKETSVKNSETEKSDSGPNKDDSKTDHANKKDLAD NCATKDATKTNGACEDIGKKPAKSSKTPETEKKKRGRKKREDKKSEKNTKDVKTEDSERK TDSESDTKTGIEKVEVKKEMGASDKVKKETDKSDEKVEVGSQVKSAVESEKNKAAAMSFF GGPAKSTTIGDDGKSYNPSVSKYHPIDDAFWKKGEKVPYLACAKTFEYIEAQSSRLKNIE MLCNLFRSIIVLSPDDLLPCLYLCLNRLAPAYEGVELGLGETVLMKAIAQATGRSVDKVK SDAQNKGDLGLVAEASRGNQRTMFAPPKLTARAVFNKLKEIAVLTGNAVMNKKVDKIKSM FIACRYSEARYLIRCLGGKLRIGLAEQSVLVALGHAVVLTPPGQEYPPEVLNAGKGLSAD ALKKRLEEAVLTVKTTYSECPNYDAIVPVLLKDGWEKLPEKCKITPGIPLRPMLAHPSKG VTEIFKRFEDSDFTCEWKYDGERAQIHVLEDGTVNIYSRNSENNTSKYPDIIARMPSVLK EGTKSCIIDSEAVAWDREQKHILPFQVLSTRKRKDADAAEIKVQVCLYAFDLLFLNGESL VRESLRTRREKLKSCLNEIEGEFMFATAMDSTDTDQISEFLDESIKGNCEGLMVKTLDRD ATYEIAKRSHNWLKLKKDYLEGVGDTLDVVPIGGYHGTGKRTGKYGGFLLACYDEENEEY QSICKIGTGFKDDDLEQHSKFFKEHVLEKPRSYYRYDRGVEPDHWFDAVQVWEIKAADLS ISPVHFAAAGLVDPEKGISLRFPRFLRIRDDKKPEEATSSAQIAEMYNSQEQIKNTSKPA ADDKDVDEEDFY NT seq 3279 nt NT seq  +upstreamnt  +downstreamnt atgccgcagccttctataacatcgttcttttcgccgccaaaaccgaaggcgaagccagca agtgaccctggtgacggtgacaagaagaagccaccaaaaacccctgaaaaagtcaacaaa agtggtgctgctggcattgactttccagttgatacagtgggtgaagttgactccccaatc aaagtatcaaccaagaaacgtgccaggcgtgtcatcgaaagtgacagcgaggatgactgt gaagtcgtcgtcaagtcgccggtaaaagatgacaatcagaatgaagagacggttctcccc attaaacaaaaagcccaaaaggtcacccctgctaaacagccccaaacacccaatgccaag gcatctccaatgccaactcgacctcctgactctcctcaactcatgtcgccaacaactggt ttacctctcaggaaaacagctagaaaaagcttcagttatggcacgaagaggaaggcggaa tcaagtagccaggatagtggaatcggtgaggaaacgccttcaaagaaaaccagggtgtct acatctccaaggaagaaatgtgaaagtaatgatgtggacatgaaagatgcaatggtcgag gaaaagaatggttcgtctcctgcaaaagaagagataatggaagcggagcagagtgagtct actgaggttggacgggaagaatctaaaaaggaggatgagtctgatggtgacaagtcagag aagaaacccactagttctgggaaaggagcttttatgaatttcttcgggggtaaaagtcaa acgcaagctaagaagagtaaagaaactagtgtaaaaaactcggagactgagaaaagtgac tctggtcccaataaggatgattcaaaaactgaccatgctaacaaaaaggaccttgctgat aattgtgcaaccaaagatgctactaaaactaatggtgcgtgtgaagacattggtaaaaaa ccagcaaaaagttctaaaacacctgagacagaaaagaaaaagagaggtcgaaagaaaagg gaagacaagaaatcagaaaaaaatacgaaagatgtaaaaactgaagattctgagagaaag actgattcagagtcggacactaaaactggcattgagaaagttgaagtgaaaaaggagatg ggtgccagtgataaagtgaaaaaggagactgataaaagtgatgaaaaagttgaggttgga agtcaagtcaagtctgcagtggaatctgagaaaaataaggcggcggctatgagcttcttc ggtggtccagcaaagtccacgacaattggtgacgatggcaagagctacaatccatcagta tccaagtaccatcccattgatgatgcgttctggaagaaaggagaaaaagtgccatatttg gcttgtgccaagacatttgaatacatcgaagctcagagctctagactcaaaaacattgaa atgctctgtaacctgttccggtcgatcattgtcctttcgccagatgatcttcttccctgc ctctacctctgcctcaaccgactggcgcccgcttacgagggcgtcgagctgggtcttggg gagaccgtcctcatgaaggccatcgctcaggcaacgggcaggagcgtggataaggtcaag agtgatgctcagaataagggagatttaggcctggtggctgaggcaagtcgaggtaaccaa agaacaatgtttgcacccccaaaactgacagcacgagctgtctttaacaagttgaaagaa attgctgtcttaactggaaatgctgtgatgaacaaaaaagttgacaagatcaagtccatg tttatagcctgtcgctactctgaagcacgatatctgattaggtgtttaggtgggaagctg aggataggtctggctgaacagtccgtgctggtggctcttggtcatgcagttgtcctcaca ccccctgggcaagaataccctccagaagtcctgaatgcaggaaagggcctctctgcagat gcactgaagaaaagattagaggaggctgtcctcacagtaaaaacaacatacagtgaatgt ccaaactatgatgccatcgtcccggtgctactaaaagatggatgggagaagctgcctgaa aaatgtaagattacgcctggtatccctctccggccgatgctggcgcacccgtccaagggt gtgacggaaatcttcaaaagatttgaggattcagacttcacatgtgaatggaaatatgat ggagaaagagctcagattcatgtacttgaggatggcactgtcaatatctacagccggaac tcggagaacaacacatccaaataccccgacatcattgccaggatgcccagtgtgctgaag gaggggaccaagtcttgcattatcgactctgaggcggtcgcctgggacagggaacagaaa cacatccttccattccaagttctgagcacacggaaacgaaaggacgccgatgccgccgaa atcaaggtccaagtctgcctgtatgcgtttgatctcctcttcctgaacggagaatccctg gtccgggaatcgttacgaacgagacgcgagaaactcaaatcctgcctgaatgagatcgag ggcgagttcatgttcgcaacggcgatggattctactgacacggaccagattagtgagttc ctggatgagtcaatcaagggcaactgtgaaggcctgatggtgaagacgcttgatagggat gcaacgtacgagattgcaaaacgctcacacaactggctcaagcttaagaaagactatttg gagggtgttggcgataccctggacgtggttccgatcggtggttaccatggcactggcaag aggacgggcaaatatggtggattcttactggcctgttacgatgaggagaatgaagagtac cagtctatatgtaagattggtacaggcttcaaagacgacgacctagaacagcattccaag tttttcaaggagcacgttctggagaaacctcgctcctactatcggtacgaccgtggggtc gaaccagaccactggttcgatgccgtccaggtgtgggagataaaggcagctgatttgtcc atctctcctgttcactttgctgccgcgggactggttgaccccgagaagggtatatcactc cgatttccacgtttcctccgaatacgggatgataagaaaccagaagaagctacttcaagt gctcaaatcgctgaaatgtacaacagccaggagcagataaagaacacatcgaaaccagca gcagacgacaaggatgttgatgaggaggatttctactga

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