Lineus longissimus (bootlace worm): 135490695
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Entry
135490695 CDS
T09977
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
llon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135490695
03015 mRNA surveillance pathway
135490695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135490695
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
135490695
mRNA cycle factors
P-body specific factors
135490695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
135490695
NCBI-ProteinID:
XP_064632125
LinkDB
All DBs
Position
7:19185025..19203746
Genome browser
AA seq
1469 aa
AA seq
DB search
MESRKGASDAALDKGNRTTAEKSVPKRYSDARQQHHMKREERNLQRKDVTSQGDTEKVED
AKVTVEVPVVEKRPEVVKDAPGAKGDQEKSKKEDSGSSKQDSTKSGKSDGKSQGNSRSDE
RDSGKKDSSSRDRASPSKYDRDRDRDRTRKGSSSYDSPRSGKIETRPSEADKRGYSRDKR
KESAGEKPRDSDREKERKKEESPRESKARRDSEKDGKSEKVVAKEVKKKEEKSQEEKDAE
EAAKVEAEKQRERELEEEKRRLEEEERLRKEEEEKRLIEEEKRCITEFVDEARERIKTKM
IQRQQNMVAADNRPDDSFFSRLDSSLKKNTAFVRKLRNLTEAQKDSLSKDFSALNLSKYI
GECSAALTEAKLKMSDVACAVHLCSLLHQRYADVSSSLLEHWQKVLPSKKDDKIANPSKL
RVDLRFFADLVSAYVFTEKEGLPILSTQLSNLISGDKEEHNNLTIIISFCKHCGDDYAGL
LPRKFRILAEKYQMEIMRSQVLKADRQKACRKLFTDYYNSLSRHVVRDHKNLKAMEKNNM
RTLLTKGELSNERKEKFEAAQQNYQKLLSNAIQFADILDEEMPELPEDEPSEQDKLGMDL
FSPMKGEYQYDGDLTLFEDEETRQFYENLPDLKAIVPGILYKDSENTAPPATESLDEAAA
TLEEDMKNLKVEDVEKEIEEKEKELKTLDTDEKEKEKDGSAENSVEKEGEEKKEAKADDI
PAEHLELLQTEAEEDDTNMCMKLLLDSFMQSLPNCVNRELIDKAAVDFCMNLNTKANRKK
LVKTLFTVQRTRYDLLPFYSRLVAELHPCMPDVAHELGLLLTGDFKWHVRKKDQINIESK
LKTVRFIGELVKFNMFPKVDALHFLKMLLFDFSHHNIDMACSLLDSCGRYLYRSLESHHR
TKVYLEVMIRKKNFLHLDGRYTTMIENAYYYSNPPDIKQAERKIRPPMHEYIRQLLYKEL
SKLSVEKVLRQIRKLDWDDPQIQFYATKCLTAVWNVRYHNIHCLANLLAGLAPYHEDVAI
NVVDGVLEDIRSGMEINIPKFNQRRVSTITFLGELYNYRMVESSVIFKILYSLITFGVSF
DDSGTSVFDPPDHLFRIRLVCVLLDTCGQYFDRGSSKKKLDYFLIYFQRYFWSKKKHEFW
QDSERRFPIDVDNMFRDSLETVRPKIKIADSYEEACKGAEELDSEFRAKLAEIIPLTDFK
EDGGDMDGLHTIQESDETDENMSLSLSQLRMTDEDQSTAESDGEERRSRSGSQMRSLTQD
MDQDHDASGDEILESAGEDDTEDICVLTGGPKVVKCQEDDDFMAAFDKIMVESVQSRAVE
AAKASQVDIALPMHLKGQAKPKASLVTSAGGSAGFLLPPSEPEKPSSSINFTLMTKKGNK
TQYSTVNVPITSEFATKYIEREHAEREEKERMKRVVLDIHERQEEEDYQEMIAGMNKTPP
VNVNRERKVKYQHPKGAPDADAIFGSKRR
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccgcaaaggagctagcgatgctgctttagataaaggcaatcgtactacagcg
gaaaagagtgtacccaagagatacagcgatgcccgacagcagcatcacatgaagagagag
gagcgaaacctgcagcgtaaggatgtgacgtcacagggtgatacggaaaaagttgaagac
gccaaggtgacagttgaggtgcctgtagtagagaagcgacctgaagtcgtgaaagatgcg
cctggggcgaaaggtgaccaggaaaagagtaaaaaagaagattctggtagtagcaaacaa
gattcgaccaaaagtggtaaaagtgatggaaaatcccagggaaattcccgatcagatgaa
cgtgattcgggcaagaaggattcctcatcacgggacagagccagtcccagcaagtatgat
cgggatcgtgaccgggatagaaccaggaaaggatcgagctcatatgatagtcctcgcagt
ggaaagattgagactcgaccgtccgaggcagataagagaggttacagtcgtgacaaaagg
aaggagagcgctggagagaagcctcgagattctgatcgggagaaggagaggaagaaagag
gagagtcctagggagagtaaggcgaggagagacagcgagaaggacggcaagagtgagaag
gtcgtagctaaggaagtcaaaaaaaaggaagaaaaaagccaagaagagaaagatgctgag
gaggcagcgaaggttgaggcggagaagcagcgtgagagagaactggaagaggagaaacga
cgtctcgaggaggaagaaagattgaggaaagaagaagaggagaagcgacttattgaagag
gaaaagaggtgtataacggagtttgtcgatgaagcaagggagaggatcaaaaccaagatg
atacaacgacagcagaacatggtggcagcagataatcgtcccgatgactcgttcttcagt
cggctggattccagtctcaagaagaacacagcatttgtgcgcaaattgcgcaacttaact
gaagctcaaaaagattccttgtccaaagattttagcgcgttgaatttaagcaaatatatt
ggagaatgttctgcagccctgacagaggcaaaattgaaaatgtctgacgttgcgtgtgct
gtccatttgtgctctctccttcaccagaggtacgctgatgtcagcagcagtctgctagaa
cactggcaaaaggtgttgccttccaaaaaggatgacaagatcgccaatccaagcaagctc
cgtgttgatctacgcttctttgccgacctcgtgtcagcgtacgtgttcacggagaaagag
ggcctgcccatcctatccacgcagctctccaacttgattagtggagacaaggaggaacat
aacaacctcaccatcatcatcagcttctgtaaacattgcggggacgattatgcggggctt
ctgccgagaaaattccgaattctcgcggagaaatatcagatggagataatgaggagtcag
gtcttgaaggctgatcgtcagaaagcatgcagaaagcttttcacggattattacaactca
ctttctcgacacgtggttcgagatcataaaaacctgaaggccatggagaaaaataacatg
agaacgttactgaccaaaggtgaattgagcaatgagaggaaagagaaatttgaggctgct
cagcaaaactaccagaaattgttgagcaatgcgatccagtttgctgacatcctggacgaa
gaaatgcccgaattgccagaggacgaaccctcagagcaagataaactggggatggacttg
ttcagtcctatgaagggagagtatcagtatgacggagacctgaccctgtttgaggatgaa
gagacgcgtcagttttatgagaatcttcccgacctgaaggctatcgtccccggcatcctg
tataaagatagtgagaataccgcaccgcctgctacggagtcgttagacgaggctgcagcg
actctagaggaagatatgaaaaatcttaaggtcgaagatgtcgaaaaagaaatcgaagaa
aaagaaaaagagctgaagacgttggatactgatgagaaggaaaaagaaaaggatggcagt
gcagagaatagtgtggagaaggaaggggaggaaaagaaggaggccaaagcagacgacata
ccggcggagcatcttgagctgcttcagactgaggctgaggaggacgacaccaatatgtgc
atgaagttattgctggacagtttcatgcagagtttaccaaactgtgtcaacagggagttg
attgataaggcagcagtggatttttgtatgaacctgaacacaaaggccaacaggaagaaa
ttagtcaagactttgtttactgtgcagagaactaggtatgatctgttgccgttctactcg
cgtctggtggccgaacttcatccttgtatgccggatgtggcccatgagctcggcctcctg
ctcactggagacttcaaatggcatgtgagaaagaaagatcagattaacatcgaatcaaag
ctgaagactgtgagatttataggcgaacttgtgaagtttaatatgtttccaaaagtagat
gccctgcacttcctgaagatgctgctctttgacttcagtcatcacaacatcgacatggct
tgcagcctgttagactcctgtggaagatacctctaccgatctctagaatcacatcatcgc
acaaaagtatacttggaagtgatgattcgtaagaagaacttcctccatctggacggccgc
tatacgaccatgatcgagaatgcatactactacagcaaccctcccgacataaagcaggca
gagcgcaagatcaggccacccatgcacgaatacatccggcagctattgtacaaagaatta
tcgaaattaagtgtcgaaaaggtgctcagacaaatacggaagttggactgggatgaccct
cagatccagttctatgcaacgaagtgtttaactgctgtgtggaatgtgagataccataac
attcactgccttgccaatctcctggctggacttgctccctaccatgaggatgtagcaata
aacgtcgtcgacggagtcttggaggatatcagatcggggatggagatcaacatacccaag
tttaaccaacggcgggtcagcaccatcacgttcctcggcgaactctacaactacagaatg
gtggagtcctcggttatcttcaagatcttgtactcactcattacgtttggagtcagcttc
gatgactcaggtacgtctgtcttcgatccacccgatcacctgttcagaatccgtcttgtg
tgtgtcctacttgatacgtgtggacagtacttcgaccgcggctcaagcaagaagaaattg
gactacttcctcatatatttccaacgatacttctggtcgaaaaagaagcacgagttctgg
caggattcagagcggcgcttcccgatcgatgttgacaacatgttcagagatagtctcgag
acagtcaggcccaagatcaagatcgcagattcgtacgaagaggcttgcaaaggtgcagag
gagttggacagcgaattcagagcaaaattggctgagatcattcctctgactgacttcaag
gaagacggtggtgatatggacggactgcacaccatacaagaatctgatgaaactgatgag
aacatgagtttgagtttgtcgcagctgcgcatgacggatgaggaccagagtactgctgag
agtgatggggaggagaggaggagtcgcagtggcagccagatgagaagtctcactcaggac
atggaccaggaccatgacgctagcggtgacgagatcctcgaatcggccggggaagatgac
acggaggatatctgtgtgttgacgggaggccccaaggtggtcaagtgtcaagaggatgac
gatttcatggctgcatttgataagatcatggtggaaagcgtgcagtctcgtgccgtagag
gctgccaaggcatcccaggtggacatagccttacctatgcacctgaagggacaggcaaag
cccaaggcgagcctggtaacgagcgcgggaggatcagctgggttcttactcccgccgagt
gaacccgagaaaccatcgagcagcattaacttcactttgatgactaagaagggcaataaa
acacagtattcaacagtgaatgttccaatcacatcggaatttgccacaaagtatattgag
cgtgagcatgctgagagagaggagaaggagagaatgaagagggtcgtcctcgatatccac
gaacgccaggaggaggaagattaccaagaaatgatcgctgggatgaataagactccgccg
gtgaatgtgaatcgcgaacgcaaggtgaaatatcaacaccctaagggtgctccagatgcg
gatgccatctttggttcaaaacgccggtga
DBGET
integrated database retrieval system
