Lineus longissimus (bootlace worm): 135490928
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Entry
135490928 CDS
T09977
Name
(RefSeq) uncharacterized protein LOC135490928 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135490928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135490928
Enzymes [BR:
llon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
135490928
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135490928
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135490928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
135490928
NCBI-ProteinID:
XP_064632581
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All DBs
Position
1:19892018..19938763
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AA seq
934 aa
AA seq
DB search
MSKTGRSRKQHTAEISIASIGNLEVISEENFLKRLEGMSSCEDCKHERSKSTQSKHRRPV
KNKKKFRQQKQARTNSPIVIKLSDTLKPQKSRRRGSKGAKMEEETVTVNTTSSGNNSSNS
LEMAGSKSEKNFSAMISILEKCHQKHFSSEFSLNLNMDSSLCSQSNVLLNNTRSPLPHTR
NTPTTPKQFFVLSNNVDVICNDLSGKPGSVVGGDSSSLVLTHSQAENGGPNTILVDKDLS
RDEMSQLVEYTTGFAVTRFDCMQLDCADCISWPSTVAKCRSVGDHLDPDDDDTDISSESS
DATDTDTTTIISTSFSSSLRPSVSESTSSSSPVSSSDELSSTPAETSSDSDEDEKQDVVI
CSPITKPKTAKAECALITKPKVIKTAAVTKPKTVKATCSTKTVRKESVTVSTKGNSATQE
KRNKKSAKDKSKSATPQIFTIQSKTGAVQGDSVYIDLTDCDVDISVFYHPKPTEYDWCYP
SSSAAPCYDGYWYYPPMSYTYFPSYYMQPPVVSIPRPLCVPRDQDILASSKTCMIPAHEI
ENFTATQPAQRPWIPLAHPERNRPTAIFTVMCYNVLCDKYCTRQQYGYCPTWALSWEYRK
KGIIEEIRHYSADIISLQEVETDQFYHFFLPELKSDGYEGVFAPKSRARTMSENERKHVD
GCAIFYRTSKFSLLKEHLMEFNQIAMASAEGSHDMLNRVMTKDNIGLAALLETKEGVFEN
GVPPDNQIRQPILVATAHVHWDPEYSDVKLIQTMMLMSDLKNFIEETTTSLRPGAPLADC
NSLPLILCADLNSLPESGVIEYLVEGKIAAKHVDFKDLGYEDCLQKLTTIDNPDFLGHDF
RLSRSYSDDVMPYTNYTFDFKGVIDYIIFSRDYMTTLGILGRIDPDWFKDNKVIGCPHPH
IPSDHFALLAEFELHVPYPTNTRGNTNNFHGSRR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaactggccggagccgtaagcagcacacagctgaaatatccattgccagtatt
ggcaatttggaggttatcagcgaagagaatttcttgaagcggctggaggggatgtcgtca
tgtgaggactgtaaacatgaacgttcaaaatcaacgcagtcaaaacaccgaagaccggtg
aaaaacaagaaaaagtttcgccagcagaaacaagcgcggaccaactcgccgattgttatt
aagctgtccgatacgttgaaaccgcagaagagtcggaggagaggttcgaagggtgcaaag
atggaggaggaaactgttactgttaacactactagctcagggaataatagtagcaacagc
ctggagatggctggcagcaaatccgagaagaatttctcggctatgatctcaattttagag
aaatgtcaccagaagcatttctcatctgaattttctttgaacttgaacatggatagttca
ctgtgctcacaaagcaatgtcctgctgaataatactcgctcacctttaccgcacacgagg
aatactccaactaccccaaaacagtttttcgttctttcaaataacgtggatgttatttgc
aatgatttgtcgggaaaaccaggctccgtggtcgggggtgattcttcatcattagtacta
acacattctcaggcagaaaatggaggacccaacacaatattagtggacaaggacttaagc
agggatgagatgagtcagctggtcgaatacaccactggctttgctgtgactcgttttgac
tgtatgcagcttgattgtgccgattgcatctcatggccaagtactgttgcaaagtgtcgt
agcgtgggggatcacttggatcctgatgacgatgacacagacattagcagtgagagttct
gatgcaacggatacagacactaccaccattatttctacgtctttttcttcgtcattgcgg
ccatctgtttcagaatctacatcctcttcatcacctgtgtcttcatcggatgagcttagc
tcaacccccgctgagacgtcctctgatagtgatgaggacgaaaaacaagatgtggtcatt
tgttctccaataaccaaacctaaaactgccaaagcagaatgtgctttgattacaaaaccg
aaagtcatcaaaacggcagcagttacaaaaccaaagacggtgaaagctacttgcagtaca
aaaacagttaggaaagaatcagtaacagtttctactaaaggtaattcagctactcaagaa
aagcgcaataaaaaatcggccaaggacaaatctaaatctgctacaccacaaatctttact
attcaatctaaaactggtgctgtacaaggagacagtgtctacatagaccttactgattgt
gatgtggacattagtgttttctatcatccaaaaccaacagaatatgattggtgctatcca
tcctcatctgcagcgccgtgttacgacggctactggtactacccgccgatgtcgtacaca
tactttccttcctactacatgcaaccacctgtcgtgtcaataccgagaccactctgcgtc
cctcgagatcaggatatactcgcttcatcaaagacatgtatgatcccagctcatgagatc
gaaaacttcactgctacccaacctgcccaaagaccatggattcccttggcacaccctgaa
agaaatcgcccaacagcgatcttcacagtcatgtgctacaatgtcctctgtgataaatac
tgcacacgccaacagtacgggtattgtccaacgtgggccttatcatgggagtatcggaaa
aaaggcatcatcgaagagatcaggcattatagcgcggacattataagcctccaggaggtt
gaaacggaccaattttatcatttcttcctgccagaactgaagtccgacggttatgagggt
gttttcgcgccgaaatcccgggctcgcacaatgagtgaaaatgaaaggaagcatgtcgac
ggttgtgctattttctacaggacatccaagttttctctgttgaaagaacatttgatggag
ttcaaccagattgcgatggcgagtgccgaagggtcccatgacatgttgaacagggtaatg
acaaaggacaacattggcctcgccgctcttttagagaccaaagagggtgtgtttgaaaat
ggtgtacccccagataatcaaataaggcagccgatcctggtggcgacagcccatgttcac
tgggacccagaatacagcgacgtcaagcttatacaaaccatgatgctcatgtccgatctg
aagaacttcatcgaagaaacaacaaccagtttgcgtccaggcgctccgctcgccgactgc
aatagcctgccgctgattctgtgtgctgatctcaactcattaccagaatctggtgtgatt
gaatatctggtggaaggaaagattgcggccaaacatgtcgacttcaaagatttgggttac
gaggattgcttacagaaactcactacgatcgacaacccagattttcttggtcatgatttt
cggttgtcgcgttcgtacagcgacgacgtgatgccgtacacaaattacacgtttgacttc
aagggcgtcattgattatatcatcttctcgcgggattacatgacgacactcggaattctc
ggccgaatcgaccccgactggttcaaggacaacaaagtcatcggctgtccgcacccacat
atcccgtcagatcatttcgcactactggccgagttcgaactccacgtaccatatcctaca
aacacacgagggaacacaaacaattttcatggttcacgcaggtag
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