Lineus longissimus (bootlace worm): 135490957
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Entry
135490957 CDS
T09977
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135490957
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
135490957
3'-5' decay
Other 3'-5' decay factors
135490957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
PhoH
ResIII
AAA_30
AAA_19
TPR_1
zf-CCCH
zf-C2H2_jaz
TPR_2
UvrD-helicase
PAM2
AAA_7
AAA_5
zf-C2H2_4
TPR_19
MOV-10_Ig-like
TPR_12
AAA_22
Helicase_RecD
Mov-10_helical
AAA_16
SRP54
zf-C2H2
zf_CCCH_4
MIT
Motif
Other DBs
NCBI-GeneID:
135490957
NCBI-ProteinID:
XP_064632616
LinkDB
All DBs
Position
1:complement(19955055..19978566)
Genome browser
AA seq
1850 aa
AA seq
DB search
MELTSAGHAAKLFQSGHYEEAAEMYSHCLDQLAVAPQDKRNNAHIALLFNRAACNSKLKK
FETAVEDYDKILSNDRKNSKALAKKAKSLAKCKKFVEALESAKLWLEGDPQNIPASEEVK
KLEIVVCALQDQDNDDDDDLANDLLSDERISPEGRDYLTSPNEEPPPLQAPNEATNIPKP
DDQPPSTNREEFNCSFCGIKFATQTELKTHCRSDLHKKKIVDDEGRTWKYRDPPRGLTSE
EYTKCPRYFGDGTCRFGSKCSQAHSDDELTEWKERFEYKRQQLQKAKESELHGNGFADTL
MEKWMNAEAPESVMSDSIPGVKVYANSDLTITMSSKKSAHAWIFTLTSRLHLHRVVLLDE
STHRHFHCASITIGPKKNQRAQKLEDHCQEWINSNPPNTNTKNETVYRIKVAFRTDIYGT
FRQTIVFDFGSEPVLCQNLCVDSNSVADFEKLAEDLVFSEIGRWDLKSKAVVKFEPAPQF
PDAADQDLMSKYPIPSASQISQSKSLQSSDANTENYKQRMHDLLAIEEMAQFSSVAKYNV
KTVLHLTTRFMLMPSLITTAKYAVNGELFAQLDLTMEVSEDTSHGRLILQNVHTVLIAPY
DHRSKVDKEPTKVFEAMVEDRGKSFIFLRLSGKCVEELGLKTDQDMHAHVQFWLNRAPMC
EMHLAVDRLPDASTVFPDVTTIPNIPWTPQSGNTDSSKSESDDPTAEADSVDLEDAAKRQ
WSENLDSRLNLKQKEAVVAITTVLSFKLPPVLLIGPYGTGKTFTLAQAALQILKQQNTRI
LICTHSNSAADLYIKDYFHPYVEDDHEEARPLRVMYKYRWMNTVSTLIQTYCLIEQEGHS
FRFRSPAKEDIEKHRIVVTTLSSSRSMYDIGLEKDFFTHILIDEAAQAVECETIMPLTLA
GDNTRIVLAGDHMQMSPEVHSDFARQHGFHVSLIERLFDIYPSDNPCKILLCENYRSHKA
IIDFTSDLFYEKKLVASGTQPEHDTYYPLTFFTARGEDVQHQNSTGFYNNSEVFEIAERV
TELQKSWPKAWGQLDENSIGVVSPYVDQVARIRSELRKRKMHMVSVERVFNVQGKQFRVI
ILSTVRTRNTCSMDSNIEDVDYGFLSNVKLLNTAITRAQSLVAVVGDPVSLCTIGKCRKV
WETFLEICHQNSSLYGMTWSQIRNQLDGVELKKTYVLNPLAPEFIPNRLRHGSDPQAPLG
YGPYGYIYTPAVPRFQRQNVFHTNVQPNPYLNLPTGYLQQLQMYAPLPYNAIPLLPRYLP
CVPPPPQPLPPQPPAAPPPHHLHNKFMPRPAGMSPEMAVNPTSSAITTNTNYTVVSVNQL
TNTSDAEPLQASGTQGKLQHSNKMTSNMKTVSTANNHIVASSSNLVHPSRPGMAPVYQNH
SMQANFQGLPMMPVQANSWQDIPGHLRQHFVQPQQTMRQNVPRNTTKNVKHDHRHGHDLH
KFGQEQPVNHRNNKKPEDAVIQNNPHLQREMYSYLLQKEGPEAAHRFIESLQQCVPKAPQ
SYEGEPLFKHHAQMTNALKEVSMKEGMPIVQSGVRHDPMKPKNNSPVRSLYRKDGSVIVS
VSQNDQMQRVRHSSSKSTGEGENSKVITWQTGRPKDPPLYPPEVMPQKHFSRFPNASVQF
DTCADFRPEQNCISSNRAHAQQKGEPCKTTAATVNVASFLDPEQTVSSVHDDLLYLDSDA
PSGVDHVVRFIQDSIDMDDSDSDSEQSRYFPRKKKTNSSGNLTMVGAIPTYAGILRGDTS
KTPGRMRHMSAPQTLYSGESSVFGPSGMTTSNGARLHERLPHQHSSGNLYDISLGLDVNS
DCFNRIPSYNSSQTSLHQEPVNEENVSDPLDHHKNLNFNKSYESTYKYFK
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggagctaacgtcagcgggtcatgctgccaagttgtttcagtcgggtcattatgaagag
gctgcggaaatgtacagccattgcttggaccagctggcagtagcaccccaggacaaacgc
aacaatgctcacattgcattgctattcaacagagcagcatgtaattctaaattgaaaaaa
ttcgaaacagctgtagaagattatgataaaatcctcagcaatgacaggaaaaacagcaaa
gccctggcgaagaaagccaagtccttagcaaaatgtaagaagtttgttgaagccttggaa
agtgccaaactgtggctggaaggtgacccacagaatatcccagcaagtgaagaagtcaag
aaactggaaatagtagtctgtgccttacaggatcaagacaatgacgatgatgacgacctt
gccaatgatttactctcagatgaacgtatttcaccagagggacgtgattacctgacatca
ccaaatgaggagccccctcccctacaagcgcccaatgaagccacaaacatcccaaagcct
gatgatcaaccacccagtactaatagagaagagttcaactgcagcttttgtggtataaag
ttcgccacccagactgaactgaagacacactgccgcagtgacctgcacaagaagaagatc
gttgatgatgaagggagaacttggaagtaccgagatccacctcgaggactcactagtgag
gagtataccaaatgtccaagatactttggcgatggcacgtgtcgatttggcagcaaatgt
tctcaggctcattctgatgatgaactcacagaatggaaggaaaggtttgagtacaagagg
cagcagctccaaaaggctaaggaaagcgaacttcatgggaatggctttgctgacactctc
atggagaaatggatgaatgctgaagccccagagagtgtgatgagtgatagcattcctggt
gtgaaagtatatgccaactcggatcttaccattaccatgtcatcaaagaaaagtgcccat
gcttggattttcaccttgaccagtcgacttcatcttcaccgcgtcgtccttctggatgaa
tccacccaccgccattttcattgcgcatccatcaccattggcccaaagaagaaccagcgc
gcacaaaagctcgaagaccactgccaagagtggattaactcaaatccaccaaacaccaat
accaagaatgagacagtttatagaataaaggttgcgttcagaacagacatttatggaaca
tttcgacagacgatagtatttgactttggaagtgaaccggtgctgtgccagaatctgtgt
gttgactcaaactctgtggcggattttgaaaagctagccgaagatcttgtgtttagtgag
atcggtcgctgggatctcaagtcaaaggctgtagtcaagtttgaacctgcgcctcagttt
cctgatgcagctgaccaagacctcatgtccaagtacccgattccgtctgcaagccagata
agccagtccaagtctctacaatccagtgatgccaacacagaaaactacaaacaacgtatg
cacgatctgcttgctattgaagagatggcacaattttctagtgttgcaaagtataatgta
aagactgtgctccacctgacgacccggttcatgctcatgccctccctcatcaccactgcc
aagtatgctgtcaacggggagttgttcgctcagttagacttgacaatggaagtctcagaa
gacacatcccatggtcgacttatcctgcagaacgtccacactgtacttattgcgccttat
gaccataggtcaaaggtggacaaggagcccaccaaagtttttgaagccatggtagaagat
cgaggaaagtctttcatatttctgcgactgtctggaaagtgtgtcgaagaacttggtttg
aagacagatcaagatatgcatgcccacgttcagttctggttgaacagggctcctatgtgc
gagatgcaccttgctgttgaccgcctgccagatgcttccacggtgttcccagatgtcacg
acaataccaaacattccttggactccacaaagtggtaacactgactcctccaaatcagag
tcagacgatcctactgctgaggcagacagcgttgacttggaagatgctgcgaagcggcag
tggagcgagaacctagactccagattaaaccttaagcagaaggaggccgtagttgccata
acgactgtgctaagtttcaagcttccccctgtgctgctgattgggccgtatggcacgggg
aaaacattcacgctcgcccaggcagcactgcagattctgaaacaacaaaatacgaggatt
ctaatctgtacacattctaatagtgctgctgatttatatatcaaagattacttccatccg
tacgtcgaggatgatcacgaggaagcccgcccacttcgggtcatgtataaatatcgctgg
atgaacaccgtcagcaccctcatacagacgtactgtctcattgaacaggagggccattcg
ttcagattccgatcaccagccaaagaggatattgagaagcaccgtattgttgtaacgacg
ttgagctcatcaagatccatgtacgacatcggactggaaaaggatttctttacgcacatc
ctgatcgatgaagccgcccaagctgtagagtgtgagaccatcatgccactgactctggca
ggggacaacacaagaatagtcctggctggagatcacatgcagatgagtcccgaagtacac
tcagatttcgccagacagcacggcttccatgtgtcactcatagagcgccttttcgacatc
taccccagtgataatccgtgtaaaattctcctgtgtgagaattacagatcgcacaaggcc
attattgactttacgtctgatctcttctacgagaaaaagctggtcgctagtggcacccag
ccagaacacgatacttactaccccctgacattcttcactgccagaggagaagacgtacag
caccagaatagtacaggtttctacaacaattctgaggtgtttgaaattgctgagcgtgtg
acagagcttcagaagtcctggccaaaagcctggggtcagctagatgagaacagtatcgga
gtggtgtcaccatatgtggatcaggtagcaaggattaggagtgagcttaggaaacgcaag
atgcacatggtctccgtcgagagagtcttcaatgtgcagggcaaacagttccgagtgata
atccttagcaccgttcgcacccgcaatacttgcagcatggatagcaacatagaagatgta
gactatggcttcctctccaatgttaaactcctcaacacggccattacgcgtgcacagtct
cttgtggcagtagttggtgatccagtctcattgtgtaccattggcaaatgcaggaaagtt
tgggaaacatttcttgagatttgccaccagaacagcagcttgtatggcatgacttggagt
cagatcaggaaccagctagatggtgtggaactaaagaagacatacgtcctgaacccattg
gcacccgagttcataccgaaccgcctgcgccacggaagtgaccctcaggctccgctcggt
tatggaccatatggctacatctataccccagccgtacctcggttccaacgccagaacgtt
tttcacaccaatgtgcaaccgaatccttatctgaatctacccacgggatacttgcaacag
ctccagatgtatgcaccactgccttacaacgctattccgttgctgcctcggtacttgccg
tgcgtacccccacccccacaacccctgccgcctcaaccgccagcagcaccaccacctcat
catctgcacaacaagttcatgccacgaccggctggaatgtcaccagaaatggccgtaaac
cctacgtcgtctgcaatcacaacaaatacgaactataccgtggtctcagtgaaccagttg
accaacacttcggatgcagagccgttgcaggcatcagggactcagggcaaattacaacac
agcaataaaatgacgagtaacatgaagacggtgtccacagcaaataaccacattgtagcc
tcgagttcaaatttagttcatccttctaggccaggcatggctcctgtttaccaaaaccac
agcatgcaggcaaatttccaaggattacctatgatgcctgtgcaggcgaactcttggcaa
gatataccaggacatttacggcagcattttgtacagccacagcagacaatgcggcaaaat
gtgccacggaatacgactaaaaatgtgaaacacgatcatcgccatggacatgatttgcat
aagtttgggcaagaacaacctgtgaatcatcggaacaataagaaaccagaagatgcagtg
attcagaataaccctcatcttcagcgtgagatgtacagttatctccttcagaaggaaggg
cctgaagctgcacataggttcatcgaaagcctacagcagtgtgtaccgaaagcaccgcag
tcatatgaaggtgagccgctgttcaaacaccacgcacaaatgacaaatgcattaaaggag
gtatcaatgaaggagggaatgccaatcgtgcaatcaggagttcgacatgacccaatgaaa
ccaaagaacaacagtccggtgcgctcgttgtatcgtaaagatgggtctgtgattgtttct
gtcagtcagaatgaccagatgcaacgggtgcggcattcttccagcaaatcgactggcgaa
ggggagaattccaaggtgattacctggcagacaggccgacctaaggacccaccactttat
ccacctgaagtcatgccacaaaaacacttctccaggtttccaaacgcctctgttcagttc
gatacctgtgccgatttcaggccagagcaaaactgcatcagcagcaacagggctcatgca
caacaaaagggcgaaccatgtaaaactactgctgctacggtaaacgttgccagttttctc
gatccggaacaaacggtgtcttcagttcatgatgaccttctctatttggattcagatgca
ccgagtggtgttgatcacgttgtacgttttatacaggatagcattgatatggatgattct
gattctgattcagagcagtcgcggtatttcccacgaaagaaaaagacaaactctagtggt
aacttaacaatggttggtgccatcccgacgtatgctggtatccttcgaggtgatacatcc
aagacacccggtaggatgcggcatatgtcggcaccacaaactctgtattctggtgaaagt
agcgtatttgggccatccgggatgacaacgtctaatggagcaagacttcatgaacgactt
cctcatcaacattccagtggaaatctctacgatatatcgttaggtctcgatgtcaactcc
gattgttttaacaggatcccctcatataactcttcacaaacctcgttacaccaagaacct
gtcaatgaagagaacgtcagtgacccattagaccaccacaagaatctcaacttcaacaaa
agctatgagagtacgtacaagtatttcaaatga
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integrated database retrieval system
