Lineus longissimus (bootlace worm): 135491612
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Entry
135491612 CDS
T09977
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135491612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llon03041
]
135491612
Spliceosome [BR:
llon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
135491612
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
135491612
NCBI-ProteinID:
XP_064633656
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Position
1:20890520..20895659
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AA seq
515 aa
AA seq
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MAANATKRKLDENDLDDEESPVTKFATLASNSKEDKRSRHCPYLDTINRSILDFDFEKLC
SVSLSHLNVYACLVCGKYFQGRGFKSHAYTHSVLDGHHVFLNLETHRFYCLPDNYEVIDS
SLADITYVLNPTFTQDDIKVLDFSSKMSRAYDSTTYLPGIVGLNNIKANDYCNVILQALS
HVTPLRDYFLREENYKSIKRPPGDQAVILVQRFGELIRKLWNPRNFKAHVSPHEMLQAIV
LCSKKRFQITNQGDPIDVMSWFLNALHLAMNGTKKRTSSIISKCFRGSMRIYSRKMPGID
VSEEEKQKLMATADYQEQVQDCPFMYLTCDLPPPPLYPDDTQENIIPQVPLHQVLSKFNG
ISEKEYKTYKDSTMKRFEITRLPPFLILFMKRFTKNRFTLEKNPTIVNFPVKNVDLSEIL
SPAVRARFPNASYDLISNIVHDGEPGSGKGTYRVHALHKGSGKWYELQDLHVVDILPQMI
TLSECYIQIYELQQNAGAAGNPSEGNGAAKDNGVS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaatgcgacgaaacggaaattagatgaaaatgatttggatgatgaggagtcc
ccagtcacaaaatttgcgacacttgcttcaaattctaaagaggacaaacggagtagacac
tgtccctaccttgacacaataaacagatcgattttggacttcgattttgagaagctatgt
tccgtttctctgtcacacttgaacgtctatgcctgccttgtttgtggtaaatatttccaa
ggacgaggattcaagtctcacgcttacactcacagtgttctagacggccaccatgtattc
ttgaacctggagacgcatcggttttactgcctgcctgacaactatgaagtcatagattca
tccttggctgatatcacttatgtgctgaaccccacatttactcaggatgacattaaagtg
ttggacttcagttccaagatgtccagggcttatgatagtaccacatacttaccgggtatt
gtggggctgaacaacatcaaggctaatgactactgcaatgtcattttacaagctttatcg
catgtaacaccactacgtgactacttcttgcgggaggagaactacaagtccatcaaacgg
ccaccaggtgaccaagcagtcatattagtgcagcgatttggtgaactgatccgtaaactg
tggaatccgcgtaacttcaaggctcacgttagtccccatgagatgttgcaggccatcgta
ctgtgcagcaagaagaggtttcagattaccaatcagggtgaccccatcgatgtcatgtcc
tggttcctaaatgcactgcacttagccatgaacggtacgaagaagagaaccagcagcatt
atcagtaaatgtttccgaggttccatgcgcatttattcaagaaaaatgccagggattgat
gtgagtgaagaagaaaaacaaaagttgatggcaacggctgattaccaagaacaagtgcaa
gattgccctttcatgtatctgacgtgcgacctccctccacctccgctgtatccagacgac
acgcaagagaacataattccccaagtcccacttcatcaagtcttgtccaagttcaacgga
atctcagagaaggagtataaaacgtacaaggattcgacgatgaagaggttcgagattacc
agactgccgccttttctcatattgttcatgaaaagattcaccaaaaaccggttcacacta
gagaagaatccgaccattgtcaacttccctgtcaaaaacgttgacctgagtgagatactg
tctccagcagtcagggcgcgcttccctaatgcctcatatgatctgatatcgaacatcgtc
cacgatggagaaccaggatcggggaaagggacatacagggtccatgcattgcacaagggc
agtggtaaatggtatgaactccaggatctacacgttgttgacattctccctcagatgatc
acattgtctgaatgctacatacagatctatgagttgcagcagaacgcaggagcagctggg
aatccctcagaagggaatggagcagcgaaggataacggagtaagctga
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