Lineus longissimus (bootlace worm): 135492208
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Entry
135492208 CDS
T09977
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04140
Autophagy - animal
llon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135492208
04148 Efferocytosis
135492208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llon04131
]
135492208
Membrane trafficking [BR:
llon04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135492208
Hops complex
135492208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
DUF1848
zf-RING_11
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_16
zf-C3HC4_2
DUF1664
zf-RING_5
zf-rbx1
zf-C3HC4
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
135492208
NCBI-ProteinID:
XP_064634570
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All DBs
Position
8:512002..525769
Genome browser
AA seq
979 aa
AA seq
DB search
MASMLEQYEQSRTRTANVGQQRSAMPEPVTSGFINARMEDETPIFNKQRINFRPPEPISH
LVVCNSYLVMAMTSNTLLRIDLEHPEAPDEVEVLKGSEDKIHRIFLDPTGRHLLISMESG
ENYFLHRNTRKAKQLTKLKGHVIDSVGWNRHNQSDSTTSEILLGTSRGLIFETEIQAGDD
SRFFQGSLDQYWKQLYNLGTKDKPTPVTGLEFDKMTLKSMNEKKYFIMATTPRRMYQFIG
TISASTEPPIFQKIFQPYEDQLERFLDLPDSLERSELYFYHTKFRESPSSFAWMAGPGVY
YGGIDVSGNAGQDTVTTNCKLIAYQRDEGEKQAVPLSIVLTEFHLLVLFPDRLKAMCVLN
EQVIFDDAMTDRFGCLRGMCKDPLRGSIWAFTDQAVFKYKLTRESRDVWQIYLDKGDFAL
ARQYCKDNPAHVDKVTVKEAEHLFKTKKFEESANLYAQTHNSFEEVALKFIQVEEKNALK
TFLMKKLSSLSVQDKTQITMIVTWLIEIWLNQLGELREQGQEMSDTYDGVQDEFRMFLAR
NRVKECLMYNRNTVYDLIASHGDIDDMVYFAVLMQDYERVIEHHLQHDNYTEALKILTEQ
CKENQRLIYRYAPLLMQNVPKETVTACIQLGRKLDPKQLIPALVQYDHKKYRTQGNETIR
YLEFCVETLKNSDVAIHNYLLSQYAKLQPERLMTYLHIQGEDPESVFYDLKYALRLCSEH
DLKRACVKIYTTMGLYEEAVDLALKVDVDLAKENANKPSDDEELRKKLWLRIARHVVEEE
EDIRRAMEFLNECDLLKIEDILPFFPDFVTIDHFKDAICTSLEQYNKHIERLKEEMDEAT
ESAREIRSEIQTFRNKYAFIKAQDKCAACSFPLLTRNFYVFPCMHRFHTDCLVSEVLPHL
LPTSRRRVEELQRKIASRDDGQASARDNTTDMRRDLAPKEELDEIVAAECILCGDYMIRC
IDKPFIESEELESVMQSWL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatgttggagcagtatgagcagtcaagaactaggactgccaatgttggccag
cagagatcggccatgcctgaaccagtcacctctggcttcatcaatgccagaatggaggat
gagacaccaatattcaacaagcagagaatcaacttcaggccacctgagcctatcagccat
ctcgtagtctgtaacagttatcttgtgatggctatgacaagcaacacactgctacgcatt
gatctcgaacacccggaagcacccgatgaggtggaagtcctgaaggggagcgaggataag
atccatcggatattcttggatcctactggacgccatctcttgatcagtatggaaagtggg
gagaactatttccttcacaggaataccaggaaagccaaacagctcaccaagctaaagggc
catgtgattgattctgttgggtggaacagacataaccagagtgactcgacaaccagtgaa
atcttacttgggacaagcagaggcctgatctttgagacggagatccaagctggcgacgac
agtcggttcttccaaggtagtttggaccagtattggaaacagctttacaaccttgggaca
aaggacaaacccacccctgtcactggccttgagtttgacaagatgacactgaaatccatg
aatgagaagaagtatttcatcatggccaccacaccaaggaggatgtatcagttcatagga
accatatctgcatcaactgaaccaccaatatttcaaaagatattccaaccatatgaagat
caactagagaggttccttgatctaccagacagcctcgagagaagtgagttgtatttctac
cacacaaagttcagagaatccccgtcaagttttgcgtggatggcaggccctggtgtgtac
tatggaggaattgatgtctccgggaatgctggacaagacacagtcacaaccaactgtaag
ctcatcgcgtaccagagagatgagggagagaagcaagcagtgcctctgtcgattgtcctc
actgagttccatctccttgtgctcttccctgatcgcctgaaagccatgtgcgtcctgaat
gagcaggtcatctttgatgacgccatgactgataggtttggttgtcttcgtggtatgtgc
aaagacccactccgtggaagcatctgggcattcacagaccaggccgtcttcaaatacaaa
ttgacgagggagtcgagagatgtgtggcagatctacctggataaaggtgactttgctctc
gccagacaatactgcaaagacaatcccgctcatgttgacaaagtgactgtgaaggaagcc
gagcatctcttcaagacgaagaagtttgaagagagtgccaacctgtacgcacagacacac
aactcctttgaagaagtggcgctgaagttcatacaagtcgaggagaaaaatgcactgaaa
acattcctcatgaagaagctgtcatcattgagtgtccaggataagactcagatcaccatg
atcgtgacgtggctgattgagatctggttgaaccaactgggagaactacgtgagcagggt
caggagatgagtgatacttacgatggagtccaggatgaatttaggatgtttttggccagg
aaccgagtcaaggagtgcttgatgtacaaccggaacacagtctatgatttgatagcgagc
catggtgatattgatgacatggtctactttgcagttctaatgcaagactatgagcgtgtg
attgaacatcatctgcagcatgataattacacagaagctctcaagattcttacagaacaa
tgcaaggaaaaccaacgtctcatctaccggtacgctcccctgttgatgcagaatgtccct
aaagaaacagtgactgcctgtatccagttgggccggaaactggaccctaaacaactcatt
ccagctctagtccagtatgaccacaagaaatataggactcagggcaatgagacaattcgt
tacttggagttctgcgtggagactctgaaaaactctgatgtggctatccacaactatctg
ctctcacaatatgccaagctccagccagagaggttgatgacctatcttcacatacaagga
gaggatcctgagagtgtcttctatgacttgaagtatgcgctgcgactctgttcagaacac
gacctgaagcgagcgtgtgtgaaaatctatacaaccatggggctctatgaggaagccgtc
gacctggccttgaaggttgatgttgatcttgccaaagagaacgcgaacaaaccgtcagat
gatgaagaattgaggaagaagctttggttgagaatagcacgacatgttgttgaagaagaa
gaggacatcaggcgtgccatggagttcttgaacgagtgtgacttgctcaagattgaagac
atccttcccttcttcccagacttcgtcaccatagaccactttaaggatgccatctgtact
tcactagaacagtataacaaacatattgagagactgaaggaggaaatggatgaagccaca
gagagtgctagagagattcgatcagagattcagacattcagaaacaaatatgcatttatc
aaagcccaggacaagtgtgcagcatgcagcttccccctgctcacgaggaacttctatgta
ttcccatgtatgcatcgcttccatacagactgtcttgtgtcagaggtcttaccccacctt
ttgccaacatcaagaaggcgtgtcgaggagctccagagaaagatcgcctcgcgggatgat
gggcaggcgtccgcccgtgacaataccactgatatgaggagggacttggctcctaaagag
gaactcgatgagatcgtggctgccgagtgtatactctgtggggactatatgattcggtgt
attgacaaaccattcattgagtcggaggaattggaatcagtgatgcagagctggttatag
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