Lineus longissimus (bootlace worm): 135492252
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Entry
135492252 CDS
T09977
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03022
Basal transcription factors
llon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135492252
09124 Replication and repair
03420 Nucleotide excision repair
135492252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llon03021
]
135492252
03400 DNA repair and recombination proteins [BR:
llon03400
]
135492252
Transcription machinery [BR:
llon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135492252
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135492252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DUF3334
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
135492252
NCBI-ProteinID:
XP_064634667
LinkDB
All DBs
Position
8:8836691..8845345
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AA seq
545 aa
AA seq
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MSSEDVLLIVNHVKHKKVEGNMYMMDTRMAWMPASSDTFKISHSYADIRVQKISPDTKDK
VQLQVVMHDNSANTFHFNNPKGRAVQQEDRAKIKELLQNLLPKFRRKINSELEEKNKLLQ
SNPEMLQLYKDLVVSGVITADEFWANRANKQGSGNTGGQDVGVSAAFLADIKPQTDGCNG
LRYNLTADIIESIFRTYPAVKDLHANSVPDKLSESEFWTKFFQSHYFHRDRINMSSKDIF
TECAKTDEKDIQKEIHTSINDPFIDLTEFKDDTLDEGYGAKGMEARQQMNATNLSMIRRF
NHHSTMVLKSLEQKEAASSAAGSSSATTQNGTKTAESSKEEESEPEAKKRKIREKIEMED
LEDEDKAATSTLKLTKLERYLHGPTPVVATSVETTESLMEASESALREMETWRPNLVQVL
DSKMALSVLGELSPGGALMYGTSQQQLSQMVPQDLQQEIKQSYSALCELLRHFWMCFPTN
TKFLEEKVIRMQSNLERFQQAKLNPLKDKLRHISYNVNLTGHIEELLNAAYIKFETWQAR
RQNKR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgaagacgttctgctgattgtgaaccatgttaagcacaagaaggttgagggc
aatatgtatatgatggacacaaggatggcctggatgccagcgagttcagacacgttcaag
attagtcatagctatgcagacattagagtccaaaagatctcgcccgacacaaaagacaaa
gtgcagcttcaagttgtgatgcatgacaatagtgcgaacacattccacttcaacaacccc
aagggtcgtgccgtccaacaggaggatcgcgccaaaatcaaagagctgctacaaaatctc
ctgccgaaattccgacggaaaataaacagtgaattggaagagaaaaataaacttttgcag
agtaatccggagatgctgcaactatataaagacttggtcgtgagtggtgtgatcacggca
gacgagttttgggcaaatagagcaaataagcaaggttcaggcaatacggggggtcaagac
gttggggtttctgctgctttcctggcggacattaaaccccaaacagacggctgcaacggc
ctcaggtacaatttgactgctgacataatagaatctatatttagaacatatccagctgtg
aaagatcttcatgccaattcggtgccagacaagttatccgagagtgaattttggaccaag
ttttttcagtcgcattactttcatcgagaccgtatcaacatgagttcaaaagacatattc
actgaatgtgcaaagacagatgaaaaagatatacaaaaagaaatccacacaagtatcaac
gatccgtttattgatctcaccgagtttaaagatgacactttggatgagggttatggtgcg
aagggaatggaggcccgtcagcaaatgaacgccacaaatctctcgatgattcgccgcttc
aatcatcactcgactatggtgctaaagtctctggagcagaaagaggctgcgtcgtctgct
gctgggtcgtcgtctgctacgacgcagaatggaacgaaaacggccgagagtagcaaggag
gaggagtcggaaccagaggctaaaaagagaaagataagagagaaaatagaaatggaagat
cttgaggatgaagataaggcagctacatcgacattaaaattgaccaaattagaacgctat
ctccacggtccgacaccggtggtcgccactagtgtcgagacgacagaatctctaatggaa
gcatcagagtcagcgctccgcgaaatggaaacttggagaccgaatctggtgcaggttctc
gacagcaagatggctcttagtgttttaggcgagctgtcaccagggggtgctcttatgtat
gggacaagtcaacaacaactttcacaaatggtcccgcaagatcttcagcaagaaatcaaa
cagagttactcagcgctgtgtgagcttttacgccatttctggatgtgttttccaacgaat
acaaaatttttagaagaaaaggtaatacgaatgcaatcgaatcttgagcgatttcaacaa
gcaaagttaaatccattgaaggacaaattacgtcatatcagttacaatgtaaatctgact
ggacacatagaggaactcttaaacgcagcctacatcaagttcgaaacgtggcaggcccgc
cgacaaaacaagcggtga
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