Lineus longissimus (bootlace worm): 135493159
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Entry
135493159 CDS
T09977
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135493159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135493159
03036 Chromosome and associated proteins [BR:
llon03036
]
135493159
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135493159
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135493159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
TPR_Sec16
Nucleoporin_FG
DUF5617
Motif
Other DBs
NCBI-GeneID:
135493159
NCBI-ProteinID:
XP_064636232
LinkDB
All DBs
Position
9:complement(13647363..13665735)
Genome browser
AA seq
1859 aa
AA seq
DB search
MFGQQNKTLFGGTSFGGSTSKLGGTFGAATPFGQSASTFGTPAASAFGTPAASTSIFGGT
TTGAAGTGSIFGGGTSTFGQQPASSSTGFSFGSTATQPSLFGQTTTASQSTGLFGTPASS
AFGAKTPGFGTTGTASTFGAQPASTGLFGASTSTGGTSLFGTQTTSAATTGTSLFGGFSG
ATAQAGTVVKFNPTNGTDTMLKNGVSHNISTRHQCITAMKEYEAKSLEELRVEDYLANRK
TAQPGATQTSGLFGATTSQPSTGFSAFGQTAAAKTTPFGTSSFGGTTGTSLFGATQPAAS
GGMFTQTKPAFGTATTSAPSFSFGGTASTGSSLFGQSTQQKSLFGTATTQAGSLFGAAAA
ATSTGSTGFGFGAATPQTSGIFGAKPTGFGAATTTAATGFQFGQQAAGTSMFGKPAASSS
GFSFGGTGSTFGQATTGTSLFGAKPTGLGTTTGFGTTGFGAGLGTTGLGTGSSLLGQQAK
PSFGFGTTGSTLGGTTGFTGFGGAGTGLGAGTTATLGQTAAGAGAGQHQLQQQLVNLVQS
PYGDSPLFRNLKHDINKEEILKPTNPAAQKAALSAATQFKISSRPVAKIKPKSLQSVNGK
AQLFDGLDDEESTYGADTFIPRKSIKKLVIKNHSPNRDMTLPLATNGLDDFPTGPPEGVN
DFFKPTSDRVGSFDNGSDDGPPDTVIRGQKNMQSVHEPSPARNQLDDTIELLNTRNKALR
MMNSLQTSSADVTDASIIDADDDDEDESRSSTPPPHPAGIVLRRPGYYTIPSMDELAVTT
DQNGDCIVEDFTVGREGYGSVFYAGITNVAGLNLDEIIHFRRKEVTVYPEDDRKPSVGEG
LNKKAEVTLDCVWPTDKTTHSPIKDLTRLQTMNYQSKIEHSTHKLGAKFIDYRPDTGSWV
FEVKHFSKYGLIDDSDDEGDNAQIEKDPKKLKQILDETQKQLAVQRQQIQVQEEQKRLQD
QQQQATLNGVLKNGQQQVPMQQDDEDDDMDMADITRERMPEVEDSEEDKEVETVPSSHRL
AHSFGVSAQSMQVMKASFFGDEDIDEEIAFKPQHEVQKDIRGPRPVSPIFKHLQIDRSSL
FGPKTTSHIQSPRPASPKPMSSTKVKVPSMTSGLFSHLRSSSPPRIIATPTPSDHALLPS
GMPQVEKIQTIVATNIRQKVIPLKKSLLHNKQHMIMDAASFMSRSFRVGWGPNWTLVHAG
QPIGAVEKATPSFPSILPSSKPQDVSRVGETPYKVTLEKINFTPYADNKDLVLRANYVKS
LSIHLKHSRLDVDGELPVFAPEEGVEALHEYAKQLEEEKENIGSHPDAACVHHTSLVWDL
CVALWGDLPLYTFDDDTDRDSYDYRMARRKAVSQWLSKAASETIEQEVKDANFKGDSHLS
AIFSCLSGGQIPEACEIAVKAGDHRLALMISQTTGNHVFRSMLKKQLTNWHETKADQFMD
LERLKIYALLASCMVWDTSALTVNVCEDMDWKRALAIHLWYHCVPTSTISDAVHEYDCAF
KGKRQTSYCGPPHPPYLEKFKDNVNSVESRADRRTVIRDCCYHILKLYGQRSHRLERILA
PTTSTPSHLDHRLSWHLANVLQSLRYVHLSEQHHAMLNSEFIAQLEAEGLWEWAVFVALH
DENNERREHAVHTLLSRHITLRQDSRQNTIENFLVEELHVPKHWLHEAKALRAHYEKRHH
DEAWHLLKAGHWNKSHVIVIRHIATDCIINEDFTELKRYLVELAAPEHAAIIKDWNVAGG
IFYDFIRITEKLDALKKGEPRLHELERLHPEVISLCNRIGSLECRSARDRLCQSEMSKRT
ANLLQVLLMLQDTNGYQARQNHVPARLLAPHVGRLPMPEDYSLQELRNLTRSYLIEMTM
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacagcagaataagacgctatttggcggaacgagttttggtggcagcacaagt
aagttaggaggtacatttggggcagcgactccctttggtcagagtgcgagtacattcggc
actccagcagcatcggcctttggtactccagctgcctcaacgagtatatttggaggcacc
accacaggagctgctggtacgggcagtattttcggaggtggaacctcaacatttgggcaa
cagcctgcgagttcaagtacaggatttagctttggaagcaccgccacccagccctccctg
ttcggtcagacaaccactgctagtcaatcaactggactatttggcaccccagcttctagt
gcctttggggcaaagacaccaggatttggaacaactggcactgccagcacatttggagcc
cagcctgcatctacaggtctatttggtgccagtacatcgacagggggaacgtccctgttc
ggaactcagaccacgagcgctgcaactacggggacaagtcttttcggaggcttctccggt
gcgactgcccaggcaggcacagtagtcaaattcaacccaaccaatggcacggataccatg
ttaaaaaatggcgtatcccataatatcagcacgcggcaccaatgcatcactgctatgaaa
gaatatgaagccaagtcactggaagaattacgagtagaagattatctagcaaatcgtaaa
actgcacagccgggtgcaacccagacgtcgggtctgtttggtgccactacttctcagcca
agcacaggattctcggcgtttggacaaactgcagccgcaaagacaacaccctttggcact
tcatcttttggtggcaccactgggactagtttatttggtgcaacgcaaccagcggccagc
ggaggtatgttcacccaaacgaagcctgcatttggtactgcaacaacgtcggcgccatct
ttcagctttgggggcacagcatctactggttcgtccttgtttggtcagagcacgcaacag
aagagcttgtttggcactgcgacgacccaagctgggagtttatttggtgcagcagccgca
gcaacatcgactgggagtactgggtttggatttggtgcagccacacctcaaacaagtggg
atatttggtgcaaagcctacgggcttcggtgccgctacaactacggcagctactggcttc
caatttggccaacaggctgctggcacgtcgatgtttggtaaaccagcggcaagcagttca
ggattcagttttggtggaactggaagtactttcggtcaagcaaccactgggaccagcctg
tttggtgccaagccaactggcttgggaacaacaacaggatttggcacgactggatttgga
gccggtctagggaccactggtcttggcacaggatcatccctcttaggacaacaggccaag
ccatcattcgggtttggtaccactggtagtacccttggtgggacgacggggtttactggt
tttggtggagcgggaacaggcttgggtgctggaactacagcaacactgggacaaactgct
gcaggtgcaggggcagggcagcatcaacttcagcaacagttagtcaacttggtccagtca
ccctatggagattcgcctttgttcagaaacctcaaacatgatatcaataaagaagagatt
ttgaagccgaccaatccagccgcccagaaggccgccctgtctgccgctacacaatttaag
atcagcagtcgacccgttgcgaagataaagcccaagtcactccagtctgttaatggcaag
gcccagctatttgacggtttagatgatgaagaatctacgtatggagctgacaccttcatc
ccaagaaaaagcatcaagaaacttgtgattaagaaccactcgccaaacagagacatgacg
ctgccgctggcgaccaatggccttgatgattttccaaccggcccaccagagggggttaat
gacttcttcaagccgacgagtgatcgcgttggtagtttcgataatggcagtgacgatggt
cctccggacacagtcatccgaggacagaagaatatgcagtcagtgcatgaaccctcgccg
gccaggaatcagttggacgacacaatagaactgcttaacacacgcaacaaggctttacgc
atgatgaattctctgcagacgagtagtgccgatgtgacagacgccagtatcattgatgca
gatgatgatgacgaggacgagagcaggagttctactcctcccccacatccagctggcatc
gtcctacggcgtcctggttattacacaatcccatccatggatgaacttgctgttacgaca
gatcaaaatggtgattgtattgtagaggatttcacggttgggagagaaggatatggctct
gtgttttacgcaggaatcacaaatgttgctggcctaaatttagatgagataattcatttc
cgtcgaaaagaagtgaccgtttacccagaagacgacaggaagccatctgttggtgaggga
ctcaacaaaaaagccgaagtaaccctggattgcgtctggccaactgataagacaacacac
agcccaatcaaggatttaacgcggttgcagaccatgaactatcagtcgaaaatagaacat
tctactcacaaacttggagcaaaattcatagattatcgtccagacactgggtcttgggtg
tttgaggtgaaacatttctcaaagtacggtttgatcgatgactcggacgacgaaggcgac
aacgcacagattgagaaggacccaaagaaactcaaacagatcctggacgagacgcaaaaa
caactggctgtccagcgtcaacaaatccaggtgcaggaggagcagaagaggctgcaggac
cagcagcagcaggctaccctcaatggcgtcctgaagaacgggcagcagcaggtccccatg
caacaagatgatgaggatgatgacatggacatggccgacatcacccgagaacgcatgcca
gaggtggaggatagcgaagaagacaaggaggttgagactgttccttcgtcacataggttg
gcccacagctttggtgtgagtgcccagagcatgcaggtcatgaaggcgtcattctttggg
gacgaggatattgatgaagagatcgccttcaaacctcaacatgaagttcaaaaggatatc
cgaggaccacgacctgtgtcgcctattttcaagcaccttcagattgaccgctcaagttta
tttgggccgaagacaacatctcacatccagtcacctcgtcctgccagcccaaaacctatg
tccagtacgaaggtcaaggtaccaagtatgacttcaggtctattctcacacttgcggtca
tcatctcccccaagaattattgccacgccaaccccgtcggaccatgccctcctcccgagc
ggcatgccccaagtcgagaagatacagacgatagtagccacgaatattcggcagaaagtc
attccattgaaaaaatccctccttcacaataagcaacatatgatcatggatgctgcatca
tttatgagtcggtcgttccgagttggctggggaccgaactggaccctagttcatgcagga
cagccaattggtgccgtagagaaagccacgcctagttttccctccatcctaccatcctcg
aagccacaagatgtcagccgcgtcggggagacaccatacaaagtcacattagaaaaaatc
aacttcactccatatgctgataacaaagatctagttttaagagctaactatgtgaagtcg
ttgtcaattcatttgaaacacagtcgcttggatgtcgacggcgagttaccggtgtttgcc
cctgaagagggcgtggaagcacttcatgaatatgctaaacaactggaggaagaaaaagaa
aatataggttcacatccagatgctgcgtgtgtccatcatacaagtcttgtatgggatctg
tgtgttgctctctggggcgatctacctctttatacttttgatgacgataccgaccgagac
agttatgactatcgcatggcaagaagaaaagcagtgtcacaatggttatcaaaagctgcc
agtgaaacaatagaacaagaagtcaaagatgctaattttaagggtgacagtcatttaagt
gcaatattcagttgtctgagtggaggtcagatcccagaagcatgtgagattgcagttaaa
gcaggcgatcaccgcttagccttgatgatttcacagactacaggcaatcatgtattcagg
tccatgctgaagaaacagttgacgaattggcatgaaactaaggctgatcagtttatggat
ctggagcgtttgaaaatctatgccctcttggctagctgcatggtctgggatacctcggcc
ctgaccgtcaatgtctgtgaggatatggactggaagcgcgccctagcaattcatctctgg
tatcattgtgttccaacctcgactatctccgatgctgtgcacgaatatgactgtgccttc
aaaggaaagcgtcaaacaagttactgcggccctccacaccctccgtatttagaaaaattc
aaagacaatgtgaattcagtggaatctagggcagacagacgtaccgttattagagactgt
tgctaccatatactgaaactttacggtcaacgctcacatcgtttagagcgtattcttgcc
ccgacgacttcgaccccgagtcacttagatcatcgactgagttggcatcttgccaatgtg
ctacagtcgctgagatacgttcatttgtcggaacagcaccatgcgatgttgaattcggag
tttattgcacagttggaggcagagggtttgtgggaatgggcggtgtttgttgcacttcat
gacgagaataatgagagacgagaacatgcagtccacactttattatcgcgtcacatcact
ttgcggcaagactcccgacagaacacaatagagaacttcttggtcgaggaattacatgta
ccgaaacactggctacatgaagctaaggctctccgtgcccactatgaaaagcgtcatcat
gatgaagcctggcacttactaaaggctggacactggaacaaaagtcatgttatagtcatc
aggcatattgccactgactgtattatcaatgaggactttacggagttgaaaagatacctt
gtagaattagctgctcctgaacatgctgctatcatcaaagactggaacgtggccggtgga
atattctacgatttcatcagaatcacggaaaaactggacgctctaaaaaagggagagcca
agattgcacgaattagagcgtctgcatcctgaggtgatttccttgtgcaacaggatcggt
agcctcgagtgccgctccgccagggacaggctgtgccagtcggagatgtccaagaggacg
gccaatctcctccaggtgttgctcatgttgcaggacacaaatggataccaggcccgccag
aatcatgtacctgcaagattgctcgccccacatgttgggaggttgccaatgcctgaggac
tattctctccaggaactgcgtaatctcacaaggagttacttgattgagatgactatgtga
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integrated database retrieval system
