Lineus longissimus (bootlace worm): 135493609
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Entry
135493609 CDS
T09977
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03030
DNA replication
llon03410
Base excision repair
llon03420
Nucleotide excision repair
llon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135493609
03410 Base excision repair
135493609
03420 Nucleotide excision repair
135493609
03430 Mismatch repair
135493609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llon03032
]
135493609
03036 Chromosome and associated proteins [BR:
llon03036
]
135493609
03400 DNA repair and recombination proteins [BR:
llon03400
]
135493609
DNA replication proteins [BR:
llon03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135493609
DNA Replication Termination Factors
ELG1-RFC complex
135493609
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135493609
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135493609
Check point factors
HRAD17(Rad24)-RFC complex
135493609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_16
ATPgrasp_ST
AAA_11
DUF2247
AAA_30
AAA_24
Sp-DndD
AAA_5
Sigma54_activ_2
baeRF_family10
AAA_19
DUF815
Motif
Other DBs
NCBI-GeneID:
135493609
NCBI-ProteinID:
XP_064637150
LinkDB
All DBs
Position
9:17874287..17877056
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPNNLAKLDYHKDQAALLKKLVHGGDFPHLLVYGPSGTGKKTRIMCILRELY
GAGVEKLRIEHASFVNPSKKKLEISTIASNYHIEVNPSDVGHNDRVVIQEIIKQVAQTNQ
LDSSSQREFKVVVLTEVDHLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIPAIRSRCL
GIRVPAPKIEEICQILQNICKKESLNLPMDLAKKIATKSNRNIRRAILTCEACKVQQYPF
SPDQEVTEPDWEVFLRETAIQIVQEQSPKRLFEVRGRLYELLTHCIPPDVIMKGLLNELI
INCDGQLKADVTRIAAFYEHRLQLGQKAIFHLEAFVAKFMSIYKRFLEEELADFF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatgggttgacaaatatcgccctaataatctggcaaaactagattatcacaaa
gatcaagctgccctactaaagaaattggtccatggaggtgattttcctcatcttttggtg
tatggtccgtcgggcactggcaagaaaacgagaatcatgtgcatcctacgagagctctat
ggtgctggcgttgaaaaattgcgtatcgaacatgcaagctttgtcaatccgtctaaaaag
aagttagagatatcaaccatcgccagtaattatcacattgaggttaatccgagtgatgtt
ggtcacaatgatcgagtggttatccaagaaatcatcaaacaggtggctcagactaatcaa
ctcgattcatcttcacagagggagttcaaagttgtggtactaacagaagttgatcacctg
accaaggatgcgcagcacgcattgcgtcgaactatggaaaaatacatggctacttgtcgc
ttgatcttatgctgtaactcaaccagtaaagttattcctgctatccgtagtcgctgctta
ggcattcgtgtccctgctcccaaaatagaagagatttgccaaattcttcagaatatctgt
aagaaggaaagtctcaacctacctatggatttggcaaagaagattgccaccaagagcaat
cgaaacatccgtcgagctattctgacgtgcgaagcctgtaaagtccagcaatatccattc
agtcctgaccaagaggtgacggagccagattgggaggtcttcctccgcgagactgccatc
cagattgttcaagaacagagtccaaaacgcctgtttgaggttcgcgggagactgtacgag
ttactaactcattgtatacctccagatgttataatgaagggtctcctgaatgaattgata
ataaactgtgatggccagctaaaagcagatgtgacccggatagctgcattttatgaacac
agacttcagctgggacagaaagcgatctttcatttggaggcattcgtggccaaattcatg
tccatctacaaacgattcttagaggaggaattggccgactttttctga
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