Lineus longissimus (bootlace worm): 135493860
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Entry
135493860 CDS
T09977
Name
(RefSeq) nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135493860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135493860
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135493860
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
135493860
NCBI-ProteinID:
XP_064637552
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Position
9:complement(19482957..19487123)
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AA seq
555 aa
AA seq
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MAFSFGQTSTATPAFSFGATTNTTVATTSAAPAFGFGAAVASTATPAASTGFNFSGFGAK
TTASTLGFGSTGFGTTTTAATNPFGFGASTAKGFGTTGTATTGFGFGSTAGTSTGTGFSF
GTATTNPATGFGFGTGSTLGATTGFGTTTGLAGATGLGQTQQPTVDSNLANMVTAVSMPT
VYGDERDSLLAKWNQLQAFWGTGKGYFSQTGAVVFCPENSFCRFKAVGYSCLPASRNEDG
LVGIFFKKKYSEVSSNQQQIVDSLHKILGSKPTLSVCVDGLKPLPDDKAELIIYVLERHP
IGTTRRIPATELNSFLIQSNIASQLQSQLAVETVIPKMGFSEEQLKQYLDTPPAGIDPLL
WDQAKLDNPNPTKLIPVPMIGFSELHKRLQHQEQQTKLHQNRLDIISSDIAELQRKHSNT
IARTEQYKRKYLELGHRVLKVMVRQETQRKLGYAIQADEEQLRVGLETIQAELNAPTQFK
GRLNELMSQIRMQNQTLSARADIPCQMDPAFQQEVKQHLKQQQEGLQHLINIIKEDLGDL
QLVEQGLADTTLYRR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctttctcttttggacaaaccagcactgcaacgccagctttcagttttggggcgacc
accaacaccactgtagccaccacgagtgctgccccagcctttggattcggagctgcagtg
gcatctactgctactccagctgcaagtactggctttaattttagtggatttggagccaag
acaacagcatccactttaggttttggctcaactggctttgggacgacaactacagcagca
accaatccatttggttttggcgcttcaacagcaaaaggatttggaacaacaggaactgcc
accacaggatttggctttggcagtacagctggaacgagtactgggacagggttcagcttt
ggaacagccaccaccaatcctgctactggatttgggtttggaactggctcaactcttggt
gctaccactgggtttgggacaaccactggccttgcaggtgcaactggtttaggccaaacc
caacaaccaactgtagacagtaacttggctaacatggtgacagcagtttccatgccaaca
gtctatggggacgagagagactcgctgcttgccaaatggaatcaactgcaagcattctgg
ggaacaggcaaaggctacttcagtcagactggtgctgtagtcttctgtccagagaattct
ttttgtagattcaaagctgtgggttacagttgcctcccagcttcccgaaatgaggacggt
ttagttggtatctttttcaagaagaaatattccgaggtcagcagtaaccagcagcagatc
gtggacagtcttcataagatccttgggagcaagccgacattatctgtttgtgtggatggc
ttgaagcctttacctgatgataaggctgagctgatcatctatgttctagagcgacacccg
ataggcacgaccagacgtatcccagcaaccgaactgaacagcttccttatccagtctaac
atcgcctcccagctccagagtcaattggccgttgagacggtcatccccaaaatggggttt
tcagaggagcaacttaaacagtacttagatactcctcctgcaggcatcgatccattacta
tgggaccaggccaagctggataacccaaaccctacaaaactcataccggtcccaatgatt
ggtttctccgagttacataaacgacttcagcatcaagaacaacagaccaagttacaccag
aacagattagatattatctcaagtgatatagcagagttacagcgtaaacattcaaacacg
atagcaaggacagaacagtacaaacggaaatacctcgagctaggtcaccgagtcctgaag
gtgatggtacggcaggagacacaacggaagctaggctatgccatccaggcagacgaggag
caactacgtgttgggctagagacgatacaggcagagctcaatgccccaacacagtttaaa
ggtcggctgaatgaactgatgtcacagattcggatgcagaatcagacattgtcggctcgt
gcggacattccttgtcagatggatccagcattccaacaagaagttaaacagcacctcaaa
caacaacaagaaggattacagcatttaatcaacatcatcaaagaagacttgggtgatcta
cagttggtcgagcaaggtctggcagatacgacactctacaggagatga
DBGET
integrated database retrieval system