Lineus longissimus (bootlace worm): 135494588
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Entry
135494588 CDS
T09977
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135494588
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
llon01002
]
135494588
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llon04121
]
135494588
03036 Chromosome and associated proteins [BR:
llon03036
]
135494588
03400 DNA repair and recombination proteins [BR:
llon03400
]
135494588
Peptidases and inhibitors [BR:
llon01002
]
Metallo peptidases
Family M67
135494588
Ubiquitin system [BR:
llon04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
135494588
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
135494588
BRISC complex
135494588
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
135494588
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
135494588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
135494588
NCBI-ProteinID:
XP_064638767
LinkDB
All DBs
Position
10:5052503..5055928
Genome browser
AA seq
289 aa
AA seq
DB search
MAVNCVHIDSDAYMVCLTHALSTEKEEVMGLLIGEIDETRVLHISAVIMLRRSDKQPDRV
EISPEQLSAASTTAENLAHELQRPMRVLGWYHSHPHITVWPSHVDVRTQAMYQMMDEGFI
GLIFSVFNQDKTTKQCRFQVTCFQSINQSPEGEAPQYMRLEIPLQIIRRDSMGKASLESL
TELPKILSQEEEDEYVRSSQGHHLDLISRIYNGSVYTRAICHIMEVMSGPLMQTLESRLE
QNHHKVSELLQEKERLTRSLSGFDDEDKLLQRPARAGTSLAMEDDQFGA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaattgtgttcatattgattctgacgcctatatggtgtgtttgacgcacgct
ttgtcgacagaaaaagaggaagtaatggggcttttgattggagagattgatgagacacga
gtcttgcacatatcggctgtgatcatgttgagacgatctgataaacaacctgatcgagtt
gagatatcgccagaacagttatcggcagcttcaacaacagcagagaatcttgcacatgag
ttgcagcggccgatgagagtccttggatggtatcattcccaccctcacatcacggtctgg
ccatcacatgttgatgtgagaacccaggccatgtaccagatgatggacgaaggtttcatc
ggactgatattctctgtcttcaaccaagataaaacaaccaagcagtgtcgatttcaagtc
acatgcttccagtcgataaaccagagtcctgagggggaagcaccacagtatatgagattg
gaaatcccgctccagatcatccggcgagattcgatggggaaggcttcattagaatcgctg
acggagttaccgaagatcttaagccaggaggaggaggacgaatatgttcggtctagtcag
ggtcatcatctcgatcttatatcaaggatttacaatggttcagtttatacacgggcaatc
tgccacatcatggaggtgatgtcagggccgttgatgcagacgttagaatctcgattggaa
cagaatcatcacaaagtttcagaacttttacaagaaaaagaacgattaactcgcagtttg
tcgggatttgacgacgaggacaagttactacagcgacccgctagagcaggtacttcttta
gctatggaagacgaccagttcggggcttga
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