Lineus longissimus (bootlace worm): 135494711
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Entry
135494711 CDS
T09977
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135494711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135494711
03012 Translation factors [BR:
llon03012
]
135494711
Enzymes [BR:
llon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135494711
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135494711
Translation factors [BR:
llon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135494711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_7
OB_NTP_bind
DnaJ
Helicase_C
HA2_C
UBA
DEAD
HA2_N
nSTAND3
AAA_19
ATPase
NPHP3_N
ABC_tran
ResIII
Motif
Other DBs
NCBI-GeneID:
135494711
NCBI-ProteinID:
XP_064639021
LinkDB
All DBs
Position
10:complement(1415043..1428132)
Genome browser
AA seq
1380 aa
AA seq
DB search
MSEDYFKTLGLQWGATDEEVNKAFKKHARTWHPDKNDSIRAQIKYEELTKAKDVLTNPLK
RRKWEHEFLRRHGARPETTLTGHGLEVALRPDETVSCVDDDSSFDDSFSWSSWAKTEDFE
KKPEQSTSSGRAAKFEAKPSYDSFLGSLSTPRDSSGATSSQSGIGSLSTPRASSSGATSS
QSGIGAFGAQRGAGMSYADPKTSSYIPSAASDLSRSKSSNSHSNKAKLKEMDTLSSALSN
LTVKPKSSGSQFPKAESNSSSSSTAGLASAFKSSGAQVSDTKVKSNGTLPAASPRVSSRP
TSGHVQSKTKPSNSSVEPSFKSQESWSKFVENIFSRSTDPKISSTGEAPTNFFTPCKAAT
VETSCRAKSSSSNILVPSRPAFMNTDDEELGLDRRQKKSTQVSKKGPAAHHEVLKLVEMG
FPLEACKKAVHVTEHTGPETAVQWLLEHAEDADFGSPFEEPVMKPSPPGNASDDEDVTML
MALGFTRAMVMHALKATDSDTDSDQEQTLECDFIDDKEPKDVGRATNDARRKPKDVRRGQ
MAVERVRIARPQIEARNTNDKPWQGEGLVREPDLDAKFLQELERKRDKDFYRQMQDIRRK
LPIYKEARNICQTIEDNQVTVIKGETGCGKTTQVPQFILDDFISRGQGSLCRIVCTQPKR
ISAITVGRRVAHERNERCGGVTHSVGYQIRLESERPRPKASILFCTTGIVLKWLENDRDL
SSFSHLILDEVHERDLRTDFLLIIMKEVLRRRRNLKLVLMSATLNAQQFADYYRTRAGGC
CPMLNIPGRTFPVEEFFLEDVVELTTYRPKKSYQGRGINHDRTRFEKWLSNLDTFQYSNQ
TKDVVKSVYNDRYIDMDLVATLVRHISTNKPAGAILVFMPGMEEINALSDKLSQQELFRS
EKAFRILQLHGSLMSTEEQQRVFDPAPDGVRKIVISTNIAETSITMDDVVYVIDCGKLKL
KNFDARKNISTLQAEWNSKANSQQRKGRAGRVKPGLCYHLYTRHQHERLVDQHKPEMLRL
RLEEICLQIKLLNISQGRITEFFQQAMDTVPQKSVERSVELLKKLNALDANEELTPLGYH
LARLPVDPHIGKMILLGALLGCLDPILTIAASLDYKSPFFAPRKKQEEANEKMRKIADNT
CSDHLMFVNAFNGWQEARRRGDEREYCWDNFLSKETLQTINKNKQHLADYVYDLGFISEK
SPSDEAANINSENKMLLRAVLCAGLYPNVGMIVTNQLVLGVVAHYFKIETAQGEVNLHPK
SVNNGQHLDYKFLVYYQKMYTSKVFIHDCTAISHVPLLLFALDFEVKEKANGKCSMVIDS
FINIGASRETARQFKALHQEFFEVLDEKFENPQPTDWSPNCREGRVMLAILRQISGRQEK
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagattactttaagacgctgggacttcaatggggggcaactgatgaagaggtg
aataaggctttcaagaaacatgccaggacttggcacccagacaaaaacgactcaatcaga
gcacaaataaagtatgaagaactcacaaaggcgaaggatgtcttgaccaatcccctgaaa
cgccgcaagtgggagcatgagtttttacgtcgacacggggccaggccagagacaacattg
actggtcatggtttagaagttgccctaagacctgatgagacagtctcttgcgttgatgat
gacagttcatttgacgattctttctcttggagttcatgggcaaaaactgaggactttgag
aaaaagcctgaacaaagtacatcgagtggaagagcggcgaagtttgaggcaaaaccaagc
tatgattcatttctcggttccctgagtaccccacgtgactctagtggtgctacatcaagc
caatcaggtattggttccttgagtaccccacgtgcctcaagtagtggtgctacatctagc
caatcaggtattggtgcctttggtgcccaacgcggtgcagggatgtcctacgcagacccc
aaaacaagtagttatataccttctgctgcatcagacttgagccgttccaaatctagcaat
tctcactccaacaaagcaaaacttaaagaaatggataccttgtcgtctgcattgtcaaat
ctcactgtcaaaccgaaatctagcggttcccagtttcccaaagcagagtcgaattccagc
agttcctcaactgctggcttagcaagtgctttcaaatccagtggtgcgcaggtttctgat
acaaaagttaaatcgaatggaaccttgcctgctgcttccccaagagtctcgagtcgacca
acatctggtcatgttcagtctaaaaccaaaccgagcaattcctctgttgaacccagtttt
aagtcacaggaatcgtggtcgaaatttgtggaaaacatcttcagtcgttcgacagaccca
aagataagttccactggtgaagcgccgaccaactttttcacaccctgcaaggccgctact
gttgaaacatcatgtcgtgccaaatctagcagttcgaacatcttggttccttcccggcca
gccttcatgaacactgatgatgaagaacttggccttgatcgccgacagaagaagagtacc
caggtgtctaaaaagggacctgctgcacaccacgaggtgctaaaactggttgaaatgggc
ttccctttagaggcttgtaagaaggccgttcatgtcacggaacatactgggccagagaca
gcagtgcagtggttactggaacatgccgaagatgctgattttggctctccatttgaagag
cctgttatgaaaccgtctcctccaggaaatgcttcagatgacgaagatgtcaccatgcta
atggcactgggattcacccgggccatggtcatgcatgccctcaaggcaacggacagtgac
actgactctgatcaggaacagacgttggaatgtgacttcatcgatgacaaagaaccaaag
gacgttggtagagcgacgaacgatgctcgacgaaaaccaaaggatgttagaagagggcag
atggctgttgaacgggtgagaatagctcgtccccaaatagaggccagaaatactaatgac
aagccatggcaaggggaaggtttggttcgtgagccagatcttgatgccaaatttcttcaa
gaactggagagaaagagagataaggatttttacagacagatgcaggacatcaggcgaaag
ttgccaatttataaggaagcacggaatatttgccaaacgatcgaagacaatcaggtgaca
gtcataaaaggcgagacaggttgcggcaagacaactcaagttcctcagttcatcttggac
gacttcatcagcagaggtcaaggatctctctgtcgtatcgtttgcactcaaccaaagaga
atcagcgctatcactgtggggcgtcgagtagcccatgaaagaaatgaaaggtgtggcggt
gttactcattccgttggataccagattcggttggaatcggaaaggccaaggccgaaagcc
tcgatccttttctgtacaacaggaatagtcctaaagtggctggaaaatgatcgagacctt
tccagtttttcccaccttatcctggacgaggttcatgagcgggatctccgcaccgatttc
cttctcatcattatgaaggaagtcttgcgcagaagacgcaatctgaaactggttctcatg
agcgctacgctaaatgctcagcagtttgctgattactatcgaacccgggcaggtggttgc
tgcccaatgctgaatattcctgggcggacatttcctgttgaggaattctttctcgaagac
gttgtggaactaaccacgtacagaccaaagaagtcctatcaagggcgagggataaaccat
gacagaacacggtttgagaaatggctttcgaacctcgacacatttcaatattctaatcaa
acaaaagatgttgtgaaatcagtctacaatgaccgctacattgacatggacctagtcgcc
actcttgtccgccacatctccacaaataaaccagctggggccatccttgtctttatgcct
gggatggaggaaataaacgccctcagtgacaagttatcccagcaagaactcttcagatca
gagaaagcgttccggattctacagttacatggctcgctgatgtcgaccgaagagcagcag
agggtctttgatcccgcaccagatggtgtgaggaaaatcgtcatatcgaccaacattgct
gagacgagcataaccatggatgatgtagtctacgtcatcgactgtgggaagctgaagctg
aagaacttcgatgccaggaagaacatttccaccttacaagcggagtggaatagcaaggct
aattctcagcagaggaagggaagggcagggagagtcaaacctggcctctgttatcacctc
tatacgcggcatcaacacgaaaggctcgtcgatcagcacaagccagagatgcttcgccta
agattagaggagatttgtcttcagataaaattgctgaacatatcacaggggaggatcaca
gagttttttcagcaggccatggacacagtccctcaaaagtctgttgagagatccgttgaa
ctcctaaaaaagctgaatgccctcgacgccaacgaagagcttacccctcttggctaccac
ctcgcccggctgccagtcgacccacacatcggaaagatgatccttttgggagcattgctt
ggatgtttggacccgatcctcacgattgcagctagcctcgattacaagtcgccattcttt
gctccgaggaagaagcaagaagaagcaaatgagaagatgagaaagattgcagacaataca
tgcagtgaccacctcatgttcgtcaatgccttcaacggttggcaagaggcgaggaggcga
ggggatgaacgcgaatattgctgggataacttcctctccaaggaaactctgcagaccata
aataaaaataaacaacacttggccgactacgtctatgaccttggattcatctctgagaag
tcgccatcggatgaggcagcaaacatcaactcagagaacaagatgcttcttcgggctgta
ctgtgtgctgggctttacccaaacgttgggatgatagtcacaaaccaacttgtactaggc
gtagtcgcccactatttcaagatcgaaacggcacagggtgaagttaacctgcaccccaag
tctgtgaataatggtcaacatctggactacaaattcctggtctactaccagaagatgtac
acgtcaaaggtgttcatccacgattgcacagccatcagccatgtccctttgttgctgttc
gcattggacttcgaagtgaaagaaaaggctaatggaaagtgcagcatggtaatagactcg
ttcatcaacattggtgcttcgcgtgaaacagcacggcaatttaaggctcttcaccaggaa
ttctttgaagttctagacgagaaattcgaaaatccacagccaacagactggtccccgaac
tgtagagagggccgagtgatgcttgccatcttacgccagatatcgggtcgacaggaaaag
tag
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integrated database retrieval system
