Lineus longissimus (bootlace worm): 135494837
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Entry
135494837 CDS
T09977
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135494837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llon03041
]
135494837
Spliceosome [BR:
llon03041
]
Complex B
Other components
Prp19-related factors
135494837
Complex C
135494837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
RRM_YTH1
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_PARP14_3
Nup35_RRM_2
O-antigen_lig
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
135494837
NCBI-ProteinID:
XP_064639235
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All DBs
Position
1:complement(19723658..19728208)
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AA seq
445 aa
AA seq
DB search
MATSKGANTYNRQNWEDSEFPTLCQTCLGDNPYIRMTKEKYGRECKICVRPFTVFRWCPG
ARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPIQVRDAALKIQDEMPKSDVNKEYYTQN
METAITNSDGVSPVGALAGKAQATSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLMKRYTSMPTLEPPEDKTITTLYVGNL
GDKLTEKDLRDHFYQFGEIRSVTMVTKQQCAFVQFTQRQAAEGACEKSFNRLIIGGRRLN
IKWGRSQAALPAPKQDGSDNEKPFEPVPGLPGALPPPPEEMGDMGSNFFGLAGPPHMMPL
HPGMGPPMMRGPPPMGFMHRPPHYGPPPGMRLPPPPPGMMPMRPPPMRPPVPLQRGLMPV
HYPSQDPSRMGAPGLTLVGGPVSTS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcaaaaggagcaaatacgtataatcgacaaaattgggaagattcggagttc
ccaactttgtgtcagacatgtttgggagataatccttacatcagaatgaccaaagagaaa
tatggacgagaatgtaagatctgcgtgcgacccttcacagtattcaggtggtgccctgga
gcacgcatgaggtttaagaagacagaagtctgccagacatgttcaaaaataaagaatgtt
tgccagacctgcctcttagatttagaatatggtttaccaattcaagttcgggatgcagca
cttaagattcaggacgagatgcctaagtctgatgtcaacaaagaatattacacacagaat
atggaaacagctataacaaattcagatggtgtcagcccagtcggtgcacttgctgggaaa
gcccaagctaccagtgatatgctccttaagcttgctaggaccacgccatattacaaacgt
aatcgaccacacatttgctctttctgggtgaagggagagtgtaaaagaggggaggagtgc
ccatacagacacgagaagcccacagatccagatgaccctcttgccgatcagaacatcaaa
gacagatactatggtataaacgatcctgtcgcagataaactgatgaaacgctacacaagt
atgccaacattagagcctccagaagacaagactataaccacactgtatgtgggaaacttg
ggggataaactgacagaaaaggaccttagggatcatttctatcagtttggtgaaatccgt
tcagtcaccatggtaacgaaacaacaatgtgcattcgtacagttcacacagcggcaggca
gcagaaggagcctgtgagaagtcattcaatcggttgatcattggtgggcgccggttgaat
atcaagtggggccgatcccaggctgctctaccggcaccgaaacaagacggtagtgacaat
gaaaagcctttcgaaccagtacctggattacctggggcattaccgccacctccagaagag
atgggtgatatgggaagtaacttctttggtttggcaggacccccacacatgatgccactt
catcctggtatgggtccgcctatgatgagaggtccaccgccaatgggtttcatgcatcgt
ccacctcactatggaccacctccaggtatgcgtcttcctcccccacccccgggcatgatg
cccatgaggccaccccccatgcggccaccggtaccacttcagaggggactgatgccggtc
cactacccatctcaggatccttcacgtatgggagcaccaggattaacgcttgtaggagga
ccagtgtcgacatcatga
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