Lineus longissimus (bootlace worm): 135494918
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Entry
135494918 CDS
T09977
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135494918
03036 Chromosome and associated proteins [BR:
llon03036
]
135494918
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135494918
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135494918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ
UBA
RRM_1
UBA_7
UBA_NBR1_C
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
135494918
NCBI-ProteinID:
XP_064639322
LinkDB
All DBs
Position
1:complement(26577245..26621477)
Genome browser
AA seq
2147 aa
AA seq
DB search
MASHDQDDCYHRLKLESDCAVVDIQRAYRSLALQYHPDRPNNKDKCSVAKFEEVTKAYWK
LTSSCYEDRDVDSNKVFFKLFKDVLLSRKGDLSIYAFFTNTHVGVRGQVDDMCIENDEEN
DTGEQEFETFVEIVENRRKKGKLIPNEFTPEKLEILRETLLEEKEAAKEEISKKLNSQKV
KPSNQVPVSKPKPKSKKQKAAEQRRREREMEAIADEIADKIKLEEERAEKKKQSEIEKQK
RQEEEKARQAAEDKRRREKEEKERIEREKREREEEEARLRDEEKRREKEEKKKKAAAAKQ
LKQQAEQKAKEDEEKKKQKQTDQQQAVNNKPKSPQQNSSPLLQTQQQKSQQYPPREVPPR
FAQKQQQQKQQKMQQGGKKGSQWGGPGWGDDDEANNWSLGPQTTGSGWTEGYSASHQGDS
QEIGTWQNPESSWGGSANTNDIIVDTKDKEAWPSIGADQGSNASEAGDDNASVKSGSVIS
SSSNPGQQGQESSQGSSAIKSQSASNGWGGTPNDTKMDANSPWGFGAANPSGNMNSTGWG
GNPPTSAAVSNQGLHMQSFQNVAAGDNALNSGLGGWGMNNAAQGSNQRPQNAMQAQKPGA
QFIDNNGPQMAANKPPGAIGNPVLWQGISNLGTGVHKPQVNQDTAWNISDSGNASNMGKS
DGTAIRNGTDQWGGATQQQNWGAPGAKQNNSKGWGQPSPVPSPNPVNPATGWNPQQPDKT
SIPQQSGGWGNLPPPQNSTAQGPPPAQWGAQNTPMNTPMNANPAKTQPSTWAQAAGKGLV
SSANTVRNPSNTAANNAPNERHLGNMEISRAVNAKDGWGQRPVKQDLSWESEVSPRTKRR
EIESANSNVWNTQVNNGTAIWENQKQAMPNAVVQPPQPPPQQQNWNSESRVSTSSSGSGG
WGDNNDYASSNTWNGPPPQESSNNWGAPPPPQQQPQPDKNNWMNTSANPNPSANVAWGSA
NGSHSQGQNQWGGPKPPDTSGGTNWGAAPGPRGSTSSWDGAGSNRSSGSWGDNNGQKSNP
SGGWGDAASSGASGNAGAAGGGNSAGPPVGWGEPPPAMPPQRTSTSSWDGGNNRGNGGGG
GWAEPPPPPPQLQKKEIKPMGWEEPSPPTQRKNIDTGTSYWGDPSASQTKPVSNWNSVST
PTTPNTPTPRPKPDDVSAVWDKQPPSSQPERGWGDISQQQKVDSGGNALWTSAIGPPPQA
KGSGWENNPQNQANQWNSGAKPKTPSSSSWGTTTIDSWNKPNEPGQAWPDDVSVWGEDDS
VVQENASWSSAKDWTKKKAAMKDAVSFQGATMAGSYKNQPQMRIKLLQQLMDMGFKKEDA
QNALISNNMNLDSAIADLIAGANADRNKDIDMTDPQKAALLKVRSMQRLHDSANNGNDEH
ADIHSDSNQYVPPNSMQNTQPFSSAQSQVPNPQAIALKQGPSLTASSLGSLTNTSISPSL
QQKIIQHPLLGQQQQQQQPPPPQQQQPQQPPPQQQEVLQQGQNLAQGQRGGLIPGGQSVQ
QQLVQHQLVQQLRMAVQAGLISPQILYQQFNTQMLSILQQLLQQQNILQRLMTQQQMIQN
KTPVNNPMAQRQQLEQVNLMIQKIKQQIVILQGQLTQAQQGYNKQAGAGGMKDMQGGSPN
DLVSGLQSEFGNFSMKDAAPPQQTQSRLTQWKLPSPEKDGMSDDPASGGTPPISDSTLNK
APGSKPITQSHSSSNLQAQSSKFDFHRSLSIGGDSTWSALTSTSESDWPTTTATPTSSVS
SVLESSKENPDNASKESLGGTPSATPPNSAGSTFNLNDMIPEFIPGKPWQGVANKNIEDD
PHITPGSISRSLSVNTIKDEYLNNLTKQQAVSNTTGDSTSSSSTWAYSNFPKSTAIPQAK
TSNWPNSASITPTSLTSELWGVPVPSKAAATRPPPGLTNQKNLWGSSSGQQQQQQQQQPN
FNRSISWGGDKSAFTAGAKKGAPPQPDSSPQSSRNANVSNQSWDGRSSSSNWLVLKNLTP
QIDGSTLKTLCMQHGPLLMFHLNLNYGQALVQYQSRDEAMKAQKSLNACVLGNTTIMAEF
ANENDLAQLSDQNVNTSSSSLWSQQSQPQQTPSHSTPQPAIHQQQHMIRSQGHQMNMKYE
SNTSQWNGANLGGLQGGMWSTGTSNLWGSSGLSHGLLPGDLLGGESM
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccatgatcaagacgattgttatcatagattgaaacttgagagtgattgtgct
gttgttgatatccagagagcttatcgaagtcttgccttgcaatatcatcctgaccgacct
aataataaggacaaatgttcagttgccaaatttgaagaagtgaccaaagcatactggaaa
ctaacatcttcatgttatgaagatagagatgtagacagtaataaggttttcttcaaactt
tttaaagatgtcctcttgtccagaaaaggagatctcagtatatatgcatttttcacaaat
acccatgtaggtgttcgtggccaggtggatgacatgtgtatagagaatgacgaggagaac
gacacaggagagcaggaatttgaaacttttgtagaaatcgttgagaatcgacgaaagaaa
ggtaagctcattccaaatgagtttacacctgagaagttagaaattttgcgggagacttta
ctcgaagagaaagaagccgcgaaagaagaaatttccaagaaattgaatagtcaaaaggtt
aaaccatcgaatcaagtgcctgtgtcgaagccaaagcctaagtcgaagaaacaaaaggcc
gctgaacagagaaggcgggagcgggagatggaagctatcgctgacgagatagcagataag
attaaattagaagaagagcgcgctgaaaaaaagaaacaatctgaaattgaaaaacaaaaa
cgtcaagaagaggaaaaagctcgacaagcagctgaagataagcgaaggagagaaaaagaa
gagaaggagcgtattgagagagagaaacgtgagcgtgaagaggaggaggcacgtctaaga
gacgaagaaaaacgccgcgaaaaagaagaaaagaagaaaaaagctgctgctgctaaacag
ctgaagcaacaagctgaacaaaaagctaaagaagacgaagagaagaagaagcagaaacag
actgatcaacaacaggctgtgaataataaacccaagtctccacaacagaatagctctccg
ctgttacagactcagcaacagaagtcacaacaatacccacctcgtgaggtaccgcctcgc
tttgctcaaaagcaacagcaacagaagcagcaaaaaatgcagcaaggtggtaaaaagggc
tctcagtggggaggcccaggttggggtgatgacgatgaggctaataactggagcctgggg
cctcaaactacgggtagtgggtggacagaaggatattctgcttcccaccagggtgatagc
caggagatcgggacctggcagaaccctgagagtagctggggtggttcagcgaacacgaat
gacataatcgtcgacacaaaggataaggaggcatggccatcgattggtgccgaccagggc
tcgaatgcctccgaagccggtgatgacaacgcatcagtcaaatcaggatctgtgatatca
agctcaagcaatccagggcaacaaggtcaagagtcaagtcaggggtcaagtgccattaaa
agtcaaagtgcttccaatggctggggaggtactcctaatgacacaaaaatggacgctaat
tccccctggggcttcggagctgctaatccctcgggaaatatgaactccactggttggggt
ggtaatccgccgacctctgctgctgtgagcaaccaaggacttcatatgcaaagctttcaa
aatgttgcagctggtgataatgcacttaactctggccttggtggctgggggatgaacaat
gctgcccaaggtagcaatcagagaccacaaaatgccatgcaagcacaaaaacctggtgct
caatttattgacaataatggacctcaaatggctgccaataaaccaccaggggctattggt
aatcctgtgctatggcagggcattagtaatttgggtacaggggttcataaaccccaagtg
aatcaggacactgcttggaacatatcggattcaggaaatgccagtaatatgggtaagagt
gatggaactgcaataaggaatggaacagaccaatggggcggtgctacccaacagcagaat
tggggagcacctggtgccaagcaaaacaactcgaaggggtgggggcaacctagtccagtg
cctagtcccaacccagttaatccggcgacaggatggaacccacaacaaccagacaagacc
agtatccctcaacagtctggtggttggggaaatcttccacctccacaaaattccactgca
cagggcccacctccagctcagtggggcgcccaaaacactccaatgaacacgccaatgaat
gccaatccagccaaaactcaacctagcacctgggctcaggctgccgggaaaggactcgtt
tcttctgccaatactgttcgtaatccttctaacactgctgcaaacaatgcacctaatgag
aggcatttaggtaatatggagatatctcgtgctgtgaatgcaaaggatgggtggggtcag
cgaccagtcaaacaggatctgtcgtgggaatctgaagtgtcgcctcgcactaaacgccgt
gagatcgagagtgctaattccaatgtgtggaatacacaagtcaataacggaactgccata
tgggaaaaccagaaacaagcgatgccaaatgctgtagtccaacctcctcaaccgccacct
cagcaacagaattggaattccgaatcaagagtgtcaacttccagctccggatcaggagga
tggggtgataataatgattatgcgagtagtaatacgtggaacgggcctccacctcaggaa
tccagcaacaactggggtgctcctcctcctccacagcagcaaccacaaccggataagaac
aactggatgaatacaagtgctaatcccaatcctagtgctaatgttgcttggggtagtgct
aatggaagtcacagccaaggtcagaatcagtggggaggtcccaagcctccagataccagt
gggggtaccaactggggtgctgctcctggtccaagaggatcaacgtcgagttgggatggt
gctggatcgaatcgcagttcaggttcatggggtgataataatggtcagaaaagcaatcca
tccggtggatggggtgatgcagccagtagcggtgcttctggaaatgctggtgctgctggt
ggtggcaatagtgctggtcctcctgttggctggggggagccgccacctgcgatgccgcct
cagaggacttcaacatcaagttgggatggtggaaataatcgtgggaatggcggaggtggc
ggttgggccgaacctccaccacctccaccacagttgcagaaaaaggagattaagcccatg
ggatgggaagaaccttcgccgccaacgcagaggaaaaacatcgatactggcacgtcgtat
tggggtgatccttctgccagtcagacgaaaccagtctccaactggaacagcgtaagcact
ccaactacacctaatacgccaaccccacgtccaaagccagatgatgtttctgccgtctgg
gataaacaaccaccgtccagtcagcctgagaggggttggggtgacatcagtcagcagcag
aaagttgacagtggaggaaacgccctctggacaagtgctattggtccaccgccgcaggca
aaaggcagcggttgggaaaacaatcctcaaaatcaagctaatcagtggaactctggtgct
aagcccaaaacaccctcatcatccagctggggtactacaaccatcgactcgtggaataag
cctaacgaaccaggccaagcttggccggatgatgtgagtgtttggggagaagatgattcg
gtagttcaggagaatgcttcttggagtagtgctaaagattggactaaaaagaaagcggcc
atgaaggatgctgtgtcgtttcagggtgctaccatggctggttcttacaagaatcagcct
cagatgagaattaaactgctgcagcaactcatggacatgggctttaagaaagaggatgct
caaaatgcattgataagcaataacatgaacctcgatagtgccattgctgatctgattgcc
ggtgctaatgctgacaggaataaagacatagacatgaccgatccacagaaagcagccctc
ctcaaggtgcgaagcatgcagcgtcttcatgacagtgctaataatggcaacgatgaacat
gcagatattcattctgacagtaatcaatatgtgcctcctaattccatgcaaaatactcag
ccattttccagtgctcaaagccaagtaccaaatccacaagccattgccctcaaacagggg
cctagtctgacagcctctagtcttggaagtctcacaaataccagtattagtccgtcgctt
cagcagaagattattcagcatccattgttaggtcagcagcagcagcagcaacaaccgcca
cctccacaacagcaacagccacaacaacccccgccacaacagcaagaggtgctgcagcag
ggacagaaccttgcacagggacagcgtggtggcctcatccctggtgggcagtcagtccag
caacagcttgtccaacaccagctagttcaacagctgcgcatggccgttcaagcaggtttg
atcagtccacagatcctctaccagcagttcaacacacagatgctcagcatcctccaacag
ctgctgcaacaacagaacattctccagcgcctgatgacccagcaacagatgatccaaaac
aagacgcctgtcaacaatccaatggcacaacgacagcagctggaacaagtcaacctgatg
atacagaagatcaagcaacaaatcgtaatcctccaggggcaactgacccaggctcagcag
ggctacaacaagcaagctggtgctggtggcatgaaggatatgcaaggcggttctccaaac
gatctggtcagcggactccagtcagaatttggtaacttcagtatgaaagatgcggcacca
ccgcagcagactcagtccagattgacacagtggaagcttccatcaccagagaaagacggc
atgtcagatgatccagcttctggcggcactccccctatctccgactcaaccttgaacaag
gctccagggtccaaacctattactcaatcgcattccagtagcaatctgcaggctcagtcg
tccaagtttgacttccatcgttccttatctattggtggtgacagtacttggtctgctctt
acctcgacctcagaaagtgattggccgacaaccactgccacccccacgtccagtgtctcc
tcagtattggagagtagcaaggagaacccggataacgcttcaaaggaatctcttggtgga
acgccttccgccacaccaccaaactcagccggctcgaccttcaacctgaacgatatgatc
ccagaatttattccaggcaaaccttggcaaggggtggccaacaagaatatagaagatgac
cctcacattactccaggcagcatttccagatctctgagtgttaacacaatcaaggatgag
tacctgaacaacctgaccaagcaacaggctgtgagcaacactactggcgattccacttcg
agcagttccacttgggcatacagcaacttccctaagtccactgccatccctcaagccaaa
actagtaattggccaaatagtgcctcaatcacgccgacatccctgacctcagagctttgg
ggagttccagtgccatccaaagctgctgccacccgccctccaccaggcttgaccaatcaa
aagaacctgtggggctcgtcttctggacaacagcaacaacaacaacaacagcaaccgaac
tttaatcgcagtatctcttggggcggtgataagtctgcatttactgcaggagccaaaaaa
ggtgcaccacctcagccagactcatctcctcaaagcagcagaaatgctaatgtttccaat
caatcttgggatgggaggtcatcctcctccaactggctggtgcttaagaaccttactccg
cagatcgatgggtctactctgaagactctatgcatgcagcatggaccgcttttgatgttc
catctgaacctaaactatggccaggcactggtgcagtatcaaagtagagatgaagccatg
aaagctcagaagtcactcaatgcctgtgtcctgggcaacactaccatcatggccgaattc
gccaacgaaaacgatcttgctcagttgagtgatcagaacgtcaatacaagctcctccagt
ttgtggtcacagcagtctcagccgcagcaaacaccttcgcattcgactccccagcctgct
attcatcaacaacaacatatgatccgctcccagggtcaccagatgaatatgaaatacgag
agcaacaccagtcaatggaacggagcgaacttgggtggtctgcaaggaggcatgtggagt
acagggacgtctaacctgtggggatcatcagggctgtcacatggcttactccccggtgat
ctgcttggtggggaatccatgtaa
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integrated database retrieval system
