Lineus longissimus (bootlace worm): 135495133
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Entry
135495133 CDS
T09977
Name
(RefSeq) collagen alpha-2(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04382
Cornified envelope formation
llon04512
ECM-receptor interaction
llon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135495133
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135495133
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135495133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
llon04147
]
135495133
00536 Glycosaminoglycan binding proteins [BR:
llon00536
]
135495133
Exosome [BR:
llon04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135495133
Glycosaminoglycan binding proteins [BR:
llon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135495133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
135495133
NCBI-ProteinID:
XP_064639635
LinkDB
All DBs
Position
10:17591910..17629180
Genome browser
AA seq
1820 aa
AA seq
DB search
MPCFSERLFPAPSPKLDSIKIPLTTISSGFGRWNLQQWILLVLVAFATINAAASQTETSS
GSRLNPKFPPPSPTEADTQRDIIGKSRCGGCAGGLCKCLAEKGSRGSPGLTGPSGIQGNP
GFPGPEGLAGPMGLKGEPGPSGPIGPKGDRGKVGVPGFPGVNGIPGLPGPPGPRGIAGLD
GCNGTAGTPGIPGFPGEEGKIGPGGSDGEKGEKGEPARIQDGVKGTKGEPGRDGQPGISG
RPGKDGQLGMKGGRGIDGPVGPPGPVGKSGPKGNMGIGYHGMKGDPGIRGPPGPPGRPNG
GSPFTEGKGFITGPPGPEGPQGMKGEPGDRGDRGYDGPSGLSGLRGDLGMKGEKGVPGIA
GPRGKMGVSGQDGLPGFKGDRGMDGQPGVPGMIGPRGDRGVNGKDGGKGDMGPVGPPGGG
DGRNGPEGPPGPPGLPGLPGDSGVDGLPGESGPKGGKGEAGGPGIPGLPGRQGDDGAKGD
KGDEGLSGIPGRDGERGFDGRAGSKGEPGPKGAPGLSIPGPRGQDGRSGLDGLPGSKGEK
GFSGPRGPPGSVKGGTPGAQGPPGPKGDTGLNGLPGREGRPGRDGDKGDRGGSCSDCRPG
SKGEKGNIGLPGRTGEKGVAGIPGLDGEPGFPGDPGTPGLPGITGPSGPSGASGAGGTKG
DKGDPARVPDVTQPGPKGDRGLPGNSGEPGLPGAEGVAGVPGLSGLPGDKGDKGGAGLPG
LDGLRGLIGPRGPEGRKGEPGIGLDGPRGDKGNGGLPGLRGRDGLDGAKGEPGFVPLNLL
TKGTQGETGLPGKDGTPGLNGEQGEKGDPGREGRPGLDGLIGPKGAPGEIGREGREGLPG
RDGLPGDKGLPGINGLPGQLGMKGDPGRDGLPGFAGLKGDAGLPGPGLTGEKGRVGPIGP
KGEPGLPGREGREGLPCVSGPQGTKGDLGRDGLPGREGAKGDKGGPGPGGLPGLPGPKGD
SGLDGSPGLNGVKGEPGVPGQPGLQGEKGTPGLPGPDGPRGFAGREGLPGRKGEGGVPGL
PGPEGPKGDMGVMGFPGQDGRPGKPGLPGLDGMKGGPGPEGGPGLPGQSGRDGLKGERGL
DGLPGQKGELGEPSAAGTKGEPGKDGPTGLPGTPGRSGLPGPDGPKGDKGDPGRGLPGIR
GTTGLPGLSGLPGEPGLPGPKGEDGLPGFNGLKGQKGGDGLPGRPGLTGRDGLPGMKGAQ
GLPGLGGPEGTKGDRGDDGPRGLPGDASEEGKPGPEGPPGPKGDKGERGTSGLPGLRGIV
GMKGIRGPEGQKGLPGLPGPKGNAGFQGLPGVPGAKGDTGLPGEFGRPGLDGLPGLRGDK
GIEGPACDEVPGVKGNEGLKGDEGLPGRDGLSGRPGLKGDSGLPGLLGQKGEPGRSLEKG
EPGLPGEKGLPGLQGVPGREGPRGLPGEFGPEGPKGERGTDGRPGLSGIPGKDGPNGPKG
SPGTPGLPGEKGEKGLRGLPGPEGRPGEKGGNGLPGLDGPSGPVGPIGPKGDKGERGLPA
DIGNIVGVKGDKGDRGQTGRPGQPGESGIDGLPGRPGQKGEIGPLGNPGLPGLVGSDGLP
GDPGRSGETGLDGLPGPRGLKGEPGLPGSAGRVDPAGYLVVRHSQTTEVPVCPNGQIKLW
DGYSLLYIEGNERAHNQDLGFAGSCLQRFSTMPFVFCNFNNVCNYASRNDKSYWLSTTAP
IPMMPVLEQEIIPYISRCTVCDAPANVIAIHSQTIKIPECPQGWNSLWIGYSFAMHTAAG
SEGGGQSLSSPGSCLEAFRATPFIECNGARGTCHYFANKYSFWLTTVDNNQQFSRPQSQT
LKAGNLRSRVSRCNVCIKNI
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtttcagcgagcgccttttcccggcgccatcgcctaaactggatagtataaaa
atcccgctaactactatttcctctggattcggccgctggaatttacagcaatggattttg
ttagttttggtagcgtttgcgacgattaatgcagcagcatctcagactgaaacatcttct
ggatcgcgacttaacccaaaattcccaccaccaagcccgactgaagcggatacacagagg
gatattattgggaagagtagatgtggtggatgtgctggaggattgtgtaaatgtttagca
gaaaaaggatcaaggggttcgcctggtttaactggacccagtggcatacaaggtaaccca
gggtttcctggacccgagggtcttgctggacccatgggactcaaaggtgaacctggacca
tcaggacctataggaccaaaaggagatcggggtaaagttggcgtccccgggttcccagga
gttaatggtattcctggtttgcctggtccacccggtccccgaggaatcgctggtttagat
ggctgtaatggaacagcgggcacacctggaataccaggttttcctggcgaggagggcaaa
attggtcccggtggttcagacggtgagaagggagagaagggtgagccggcgaggatccaa
gatggagtcaagggaaccaaaggagaacctggacgcgatggacaacccggcatatcgggt
cggcccggaaaagatggtcaactgggaatgaagggtggaagaggcatagacggcccagtg
ggtccacccggtccggtcggtaaatctggtccaaaaggcaacatgggcattggttaccat
ggaatgaagggagatcctggtatccgtggtccccctggaccacctggacgacccaatggt
ggctcaccattcactgaaggcaaaggattcatcacaggtccgccaggacccgaggggccc
caagggatgaaaggagagcccggcgatcgtggagatcgaggttacgatggcccgtcggga
ttgtcaggtttgcgcggagatttgggcatgaagggggagaagggtgtccctggcatcgct
ggaccaagaggtaaaatgggtgtgtctggtcaagatggtttaccaggcttcaagggagac
agaggcatggacggccagcccggtgtccctggaatgatcggaccaaggggagatcgtggt
gtcaatggaaaagatggcgggaagggagacatgggtccagtcggtccccccggtggtgga
gatggaagaaatggcccagaaggcccacctggccccccaggtctgccaggccttcctggt
gacagtggtgtggatggtctcccaggcgaatctggccccaaaggtggcaaaggagaagct
ggcggtcctgggatccctgggttgccagggcgacaaggagatgacggagcgaagggagac
aagggcgatgaaggtctttctggtatcccaggacgagatggagagcgcggttttgatgga
cgagctggaagcaagggagagccaggaccaaaaggtgccccaggtctgtcgatacccggc
ccacgaggacaggacggtcgctcaggtcttgatgggttacctggcagtaagggagagaaa
ggtttctctggacctcggggtccccctggtagtgtgaaaggtggcactcccggtgcccag
ggtccccctgggcccaagggagatacaggtctgaatggtctgcctggacgcgaaggacgc
cccggacgtgatggagataagggtgacagaggtggctcttgctctgactgccgcccagga
agcaaaggagagaagggtaacattggattgcccggccgcaccggtgagaagggtgtggca
ggcatccctggcctggatggtgagccgggcttccctggtgatccaggtacacctggtctg
cctggtatcactggtccttctggtccttcaggagcttctggcgcaggaggtaccaagggt
gacaaaggagaccccgccagagtcccagatgttactcaacctggtcccaagggtgatcgc
ggacttcctggtaactctggggagccaggtttgcccggagcagagggagttgctggagtg
cctggtctgtctggactaccaggggacaaaggtgataagggtggtgccggacttcctggt
ttggatggactgcgtggtttaattggaccaagaggtcccgagggtcgcaagggtgagcct
ggtataggcctcgatggtcctagaggagacaaaggaaatggaggattacccggtttgcgt
ggaagagatggattggatggtgctaagggagagccaggattcgtcccgcttaatctgttg
accaagggaactcagggagagactggactaccagggaaggatggcactccaggattaaat
ggagagcagggagagaaaggtgacccaggacgtgagggtcgaccaggtcttgacggactc
atcggtcccaaaggtgcacctggtgagattggacgcgaaggacgagagggtctccccggt
agggatggactgcctggagacaaaggtctcccaggtatcaacggcttgccaggacaactt
ggaatgaagggtgacccaggccgtgacggtttgcccggtttcgcaggattgaagggagac
gctggcctgcctgggccaggtcttactggtgaaaagggcagagtaggccccattgggcct
aaaggtgaacctggtctacctggaagagaaggaagagagggtcttccctgcgtttctgga
ccacagggaacaaagggagatcttgggcgtgatggtttgccgggccgtgagggagccaag
ggagacaaaggcggcccaggtccaggaggcctcccaggcctcccaggccccaagggcgat
tctggcctcgacggatctccaggactgaacggtgttaagggagagccaggcgtccccggc
caacctggtctccagggagagaagggaacgccaggtcttcccggcccagatggaccgcgt
ggattcgcgggacgtgaaggactacctggaaggaagggtgaaggcggcgtgccaggtttg
cctggaccagagggaccaaagggagatatgggcgttatgggattcccaggacaagatggc
cgtcccggtaaaccaggactaccaggtttggacggcatgaagggcggcccgggaccagag
ggtggccctggtctgcctggtcaatcaggccgtgatggactcaaaggagagcgtggattg
gacggactccctggccagaagggagaactcggtgaaccatcagctgccggaaccaaggga
gaaccagggaaagatggaccaaccggactaccaggaacaccaggtcgaagcggtctgcca
ggcccagacggaccaaagggtgacaagggtgacccaggacgtggtctgcctggaattcga
ggcacgacaggactacctggcctcagtggtctaccaggagagccaggactgcctggacca
aagggtgaagatggacttccaggatttaatggacttaaaggacagaagggtggagatggc
cttccaggacgcccaggtctcacaggtagagatggcctacctggaatgaagggagctcag
ggtctaccaggccttggaggaccagagggaaccaagggagaccgcggtgatgatggaccg
aggggtcttccaggagatgcgtctgaggagggtaaaccaggacccgagggaccacctgga
cctaagggtgacaagggtgagaggggtacctcaggtcttcctggactcagaggtatagtt
ggtatgaaaggtataagagggcctgaaggtcaaaagggtctgcctggtttacctggtccc
aagggtaatgctggcttccaagggctgcccggtgtaccaggggctaagggtgacaccggc
ctgcctggagaatttgggcgccccggcctcgacggcttgcccggtctaagaggagacaag
ggtatagagggcccagcttgtgatgaggtgcctggagtcaagggcaacgaaggtctaaag
ggtgacgaaggactgcctggtcgtgatggcttgagtggtcggccaggactgaagggtgac
tcaggtcttcctggattattgggtcagaagggcgaaccaggtcgctccttggagaagggt
gaacctggcctgccaggtgagaagggactgccaggattacaaggtgtcccaggtagagaa
ggtccacgaggcctcccaggcgaattcgggcccgaaggcccaaaaggtgaacgcggcact
gacgggcgtccaggcctctctggcattcccggcaaggatggccccaatggaccaaagggt
tcacccggcacacctggtctgcctggcgagaagggtgaaaagggtcttcgaggcctccca
gggcctgaaggacgaccaggtgaaaagggaggaaatggactccctggacttgatggaccc
tccggtcctgtcggtccaattggaccaaagggagacaaaggagagcgaggtctgccagca
gacattggcaacatcgtcggagttaagggagacaagggagacagaggtcaaacagggcgt
ccaggtcagcccggtgagagtggcatagatggtctgccaggcaggccaggacagaaggga
gagattggcccgctgggtaaccctggcctgcccggacttgttggatctgatggtctgcct
ggtgacccgggtaggtccggtgagactggtctcgatggactgccaggtccacgaggtctc
aagggagagcctggtctgccaggatcggccggcagggtcgacccggctggatatctcgta
gtccgccacagtcaaaccaccgaggtgcccgtctgtccaaatggccaaatcaagctctgg
gatggttactccctgctttacatcgaggggaatgagagggcacataaccaggatctaggt
ttcgctggctcttgtctccagcgtttcagcacgatgccgttcgtcttctgcaatttcaac
aacgtctgcaactacgccagcagaaacgacaaatcctattggctgtcgacgacggcgcca
attcccatgatgccagttctggagcaggagatcatcccgtatatctcccgatgcactgtc
tgtgatgccccagctaatgtgatcgcaatccacagtcagacgattaagattcccgagtgc
ccacaaggttggaactcattgtggattggatacagttttgccatgcacactgctgccggg
tctgagggtggtggccaatctctgtcgagtcccggatcctgcctagaggccttccgggcc
acgccgtttattgaatgcaatggtgctagaggaacatgtcattacttcgcaaacaaatac
agtttctggctgacgacagtcgacaataaccagcagttctcacgaccgcaatcacaaaca
ttgaaagccggaaacttaagatctagagtcagtcgttgtaatgtttgtataaagaatatt
tag
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