Lineus longissimus (bootlace worm): 135495412
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Entry
135495412 CDS
T09977
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llon03041
]
135495412
03016 Transfer RNA biogenesis [BR:
llon03016
]
135495412
Enzymes [BR:
llon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135495412
Spliceosome [BR:
llon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135495412
Transfer RNA biogenesis [BR:
llon03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
135495412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Motif
Other DBs
NCBI-GeneID:
135495412
NCBI-ProteinID:
XP_064640087
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All DBs
Position
11:complement(15306994..15416708)
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AA seq
737 aa
AA seq
DB search
MTAFEEMGVMPEIGQAVEDMDWSLPTDVQAEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQIVYETMRDMKEGKGTQVTTKASSSKKWKMNVYDRGDAMAIDPEGRLCQSRDQQGWHGT
RSNKGVSAGGKYYYEATVTDEGLCRVGWSTAKARLDLGTDKEGFGFGGTGKKSFGKQFDT
YGEAYGINDTIGCYLDLDSFTIKWSKNGTDFGKAYDIPANLRNSTYFASVCLKNAEIKFN
FGDSPLKYPPQREYKALGKAATEFVTSSQYGGGGPAASKGPAPNAPYAIIIEPSRELAEQ
TLNQVRKFKKHLKDILIQELLLIGGIPAKDQIDRLMNGVEIVCGTPGRMDDLMSTGKLLL
NNVRFFVLDEADGLLSQGNGDLINRIHAQIPKVTNDGKRLQMVVCSATLHNFDVKKMAER
LMYFPTWIDLKGQDSVPETVHHCVCMIDPNKDMSWMSMQRHVTTDGVHEKDRIDARNLTP
ETLSEAVKLLKGEYLLRVIKEYNMDKALLFCRTKLDCDNVEAYFTSLGGGPRGRNRELSC
VCLHGDRRPQERKGNLEKFKNGEVRFLVCTDVAARGIDVMGLPYVVNVTLPDEKQNYVHR
IGRVGRAERMGLAVSFVSSVKEKVWYHSNCSNRGKGCYNTNLTDRGGCCIWYNEPQLLAD
VEDHLGVTIDQIEPDLKIPINEFDGKVSYGQKRSNAGSGYKGHVDFLAPTVAELAALEKK
AQTSRITLLHRKPFATR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttttgaagaaatgggtgttatgcccgagatcggtcaggcagtggaagatatg
gattggagcctgcccactgatgtccaggctgaagctatcccgatgatcctggggggtgga
gatgtactcatggcagcagagactgggagtggaaaaactggggccttctgtctgcctatc
ctgcagattgtttatgaaaccatgagggatatgaaagaagggaagggcactcaagttact
acgaaagcatcttcatctaagaaatggaaaatgaatgtgtatgatcgtggtgatgctatg
gccattgatcctgaagggagactgtgccagagtcgtgatcagcaaggatggcatggcaca
agatcaaacaagggcgtcagtgcaggaggcaaatactactatgaggcaactgtaactgat
gagggcttgtgtcgtgttggttggtcaactgcaaaggctcgtctagatcttggtactgac
aaggaaggatttggttttggtggcacaggaaaaaaatcattcggaaaacaatttgacact
tatggcgaggcatatggcatcaatgacacaattggatgctatctcgacctagacagcttc
accatcaagtggtccaaaaacggcactgactttggtaaagcctacgacatccctgcaaac
ctaagaaattccacttatttcgcctcagtctgcctcaagaatgctgagatcaagttcaac
tttggcgacagtccattgaagtatccccctcagagagaatacaaggctctgggcaaggct
gccacagaatttgtcacatcgtctcaatatggaggtggaggccctgctgcttcaaaaggc
ccggcaccaaatgccccatatgccatcatcattgagccatcgcgagagttggcggagcaa
actctgaaccaggtcaggaaattcaaaaagcatcttaaggacattctgattcaggagttg
ttgctaattgggggaattcccgctaaagaccagatcgatcggctgatgaatggcgtagag
attgtctgcggcaccccaggacgcatggatgatctcatgtcgacaggaaagttactcctc
aacaacgtgcgcttctttgtgctggatgaagcggatggcttgctctctcaaggcaatggt
gacctcattaaccgcatccatgcacagatacccaaggtgacaaatgatggcaagcgatta
cagatggttgtatgttctgcaacactgcacaactttgatgtcaagaaaatggcggaacgc
cttatgtattttcccacttggatagatctgaaaggccaggacagtgtccccgaaaccgtt
catcattgtgtgtgcatgattgacccaaataaggacatgtcttggatgagtatgcagcgc
cacgtcacgacagatggcgtccatgagaaggatcgtatcgatgcaaggaacttaacccca
gagacgctgtcggaggcagtgaagctcctaaagggagagtacctcctgagagtgatcaag
gaatacaacatggacaaggcgctcctcttctgccgcacgaagctcgattgtgacaatgtt
gaggcatacttcacatcccttggaggaggtccaagggggcgtaaccgtgaattgtcgtgt
gtgtgtctgcatggagatcgccgacctcaagaacggaaaggcaacttggagaagtttaaa
aatggcgaggtgcgtttcttggtctgcacagatgtggcggcccgtggtattgatgtcatg
ggtttaccctatgttgtcaatgtgactcttcccgatgagaaacagaactatgtgcatcgt
attggacgcgttggccgagctgagaggatgggtttggcagtctcgtttgtaagcagtgtg
aaggaaaaggtctggtatcattccaactgcagtaacagaggcaagggatgctacaatacc
aaccttactgaccgcggcggatgctgcatctggtacaacgaaccccagctgcttgcagat
gttgaggaccatcttggtgtaaccatagaccagattgagcctgacttgaagatccctatc
aatgagttcgatggcaaggtctcctatggacagaagaggtcaaatgctggaagtggatac
aagggccatgtggatttcctcgcacctactgttgctgagctagccgccctcgaaaagaag
gcacagacttcacggatcactctccttcataggaaaccatttgcaactcgctag
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