Lineus longissimus (bootlace worm): 135495505
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Entry
135495505 CDS
T09977
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135495505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135495505
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135495505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Gasdermin_C
Spectrin
MmeI_C
RepB
Vps39_1
Motif
Other DBs
NCBI-GeneID:
135495505
NCBI-ProteinID:
XP_064640294
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Position
11:complement(1675399..1682985)
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AA seq
824 aa
AA seq
DB search
MEVDAEGFSDLLQQAEQLTAEMDTGTDLPRVERNLQQVLEAGQRLWSRTHAIQDSTDVKA
SVLLGSKGFDVPRISQKLETLGAVKTFEPLEPVRDTDIQGFLRNERENALLAVIEQTRKN
TFEQTSCHHWARQEDEWEREKQRILNALVGTGQETMDFPQETEGLLNDSVSMNGRSTLDS
TEMAYAKQVYIYNDQVIQKGLRRELSEMCAQVGEKVDDKNMVEIWSMVHHMTQVPMAAGN
IVTARNSKKMQMAFVTQARKYLEHLYKKYIQSCIYGNRQQAKLGGIPGTYPLVRSFLNVK
VPAGTQGLEDGTIDGHPVWALVYYCVRCGDLQAALNIVKTSAKQLGEFEGYLQEYAHGED
RRLSPENETKIKLQYRRSVRNSTDPYKRALYCLIGCCDPQDNHSEVADKTDDYLWIKLCQ
IGFTESDTSQDQLTLSQLQTTLLEEYGESHFNAYQVPVNYFTVLFLTAQFEAAIGFLAHI
DKLRCHAVHIAMVLYELNLLARPHTTQAQLLTQDVSDPKPMRRLNFARLIMMYTRKFEAT
DPREALQYFFFLRDLRTSQGDNLFMTCVSELVLETREFEMLLGKLVKDGTRRPGAIDKFN
ADTQKIIELVAKDTENKGHFEDAVKLYDLARNHEKVLELLNKLLTQVLSQAPTPQSARDR
LKALAVAIAERYRSLGQEGTRSTTCTFYLLLDLMTFFDEYHAQHLDQAMDTIVQLKLLPT
TTETVERLVNNFKHYTDEIRRSLPDVLLATMNILYLQSKKVRSSGFQSPLLSKSTFGRDD
GGQDSYLNQLRRQARALITFAGMIPYRMPGDTNSRLVQLEVLMN
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgatgcagagggattctctgacttgctgcagcaagcagagcagctgacagca
gagatggacacgggaactgatctgccaagagtggagaggaatctccagcaggttcttgag
gctggccagaggctctggtcccgcacccatgctatccaagacagtactgatgtcaaagca
tctgtcctgcttggatccaaagggtttgacgttccccgtatctcacagaaactggaaaca
cttggtgccgtcaaaacatttgaacctctggaaccggttagagacacagacattcaaggc
ttcctgaggaacgagagggagaatgcacttttggccgtcattgagcaaacaaggaaaaac
acatttgagcagacctcgtgccaccactgggcgcgtcaggaggatgagtgggagcgagag
aaacaaaggatcctgaacgcactggtcgggacgggacaggagaccatggacttcccacaa
gaaacagagggtttgctgaatgattctgtaagcatgaatggcaggagtactttagacagc
actgagatggcctacgccaaacaggtttacatctacaatgaccaggtgatccagaaaggc
ttgagacgagagctgtctgagatgtgtgcacaggtcggagagaaggttgatgacaagaac
atggttgagatttggagtatggttcaccacatgacccaggttcccatggcagcaggaaat
atcgtcacagcgagaaactccaaaaagatgcagatggcatttgtgactcaggcgaggaaa
tatctcgaacatctctataaaaagtatatccagagttgcatttatggtaaccggcagcag
gcaaagctgggaggtattcctggcacatatcccttggtacggagcttcctcaatgtgaaa
gtgcctgccggtacacaaggactagaggatggaacgatcgatggccaccctgtctgggca
ttagtctactactgcgttagatgtggggacctccaggcagcattaaacattgtcaagaca
tcagcgaagcagcttggagaatttgaaggatatttacaagaatacgcacacggtgaagac
agacgattaagtcctgagaatgaaacaaaaatcaaacttcaatacagacgctcggtgcgg
aacagtacagatccttataaaagggctttgtattgcttgattggttgttgtgacccccag
gacaaccactctgaagtggcagacaagacagacgactacctctggatcaaactctgccag
attggcttcaccgaatctgacacatcacaggatcaactcacacttagtcagttacaaaca
acgttattagaagaatatggtgagagccacttcaatgcctaccaagtccctgtcaactac
ttcacagtgcttttcctgactgcccaatttgaagctgccattggattcctcgcacacatc
gacaagttacgctgtcatgccgtccacattgctatggtcctctatgaattgaatttatta
gcccggccgcatacaacacaggcacagttgttaacacaagatgttagtgaccccaaaccc
atgcggagattgaattttgcacgattaatcatgatgtacactcgcaaatttgaggcgaca
gacccaagagaagctttacagtatttcttcttcctcagggatctgcggacttcccagggt
gataacctgttcatgacgtgtgtcagtgaattagtgctcgagacaagagagtttgaaatg
ctactggggaagttggtcaaagatggcaccagaagacctggtgctattgataaattcaat
gctgacacacagaaaattatagagctggtggcaaaagatacagaaaataaaggacatttt
gaagatgctgttaaattatatgatttagctcggaatcatgagaaagttcttgagctgttg
aacaagctcctaacccaggtgctgtcacaggctcctactcctcagtctgccagagaccgg
ctgaaggcactggctgtggccatagcagagagatatcgttccctcggacaggaaggtacc
aggtcgaccacatgcacgttttacttgttattggatttgatgacgttctttgatgaatat
catgcgcagcatttggaccaagccatggatacaattgtacagctgaaacttctgccaaca
acaacagaaacagtggagagattggtgaacaacttcaagcattatacggatgagatccgc
cgaagtcttccagatgtgctactggcgacgatgaatattctctatctccaatccaagaag
gttcgatcgtcaggcttccagagccctctgttgtccaagtccacattcggccgagacgac
ggtggtcaggactcgtatctcaatcagctgcgcagacaagcccgagccctgatcacattc
gctgggatgattccgtatcggatgccgggggacacgaactcaagactcgtacagttggaa
gtgctcatgaactga
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