Lineus longissimus (bootlace worm): 135495519
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Entry
135495519 CDS
T09977
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135495519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135495519
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135495519
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135495519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
135495519
NCBI-ProteinID:
XP_064640318
LinkDB
All DBs
Position
1:27832747..27846544
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AA seq
752 aa
AA seq
DB search
MADRRKLQVEIDRCLKKVGEGVETFDDIWQKVHNATNTNQKEKYEADLKKEIKKLQRLRD
QIKTWMASNDIKDKQILMDNRKLIETQMERFKVVERETKTKAYSKEGLGAAAKLDPIQKE
KDEVTSWLSHNIENLNIQIDQFECEIETLMVGSKKKKLDRDKTEKVDAFRLWLERHRFHV
RQLETLMRMVDNDALELDQLKKIKEDVEYYIEANQEPDFEENEFIYHDIDIEDIGTLVAT
SPTEEDGFTNMSGTPTSTNSSSPSPSPGLSNHSKDDDRKRHKSEEVRRSISAQERSKNNT
NIKMPSTPTKLSSSSGTSIIGSSNHNTIASPPPGPGYAHAAQQNSNAGPGSMHSQMTSIP
KYNRFPPTCRQELSNNSLFSYDSKPMMNSIDHSLANSLGPIITSPTVTTAVSESLITSQS
VIPPAPSPSLIMTAQPTVSSVITNATSSMPMPNNMSNSVMPEILMNGPASAGGNLPNDTS
SSPTDAMSSLKSIAQQALMKFHEGGLELPTSESEGEPPSVMENMNSGFFLNNTSEPATPS
PEISLQSQQPQPPQPPPPTQQQPTQQQTPPQQPPQAPPPPPPQQQQTTTIHLNPLLGVAP
LGPQPLTKEHCYQSAMLESGFHHQPHPSDSERLRQYLPHNPCPTPAYYPQVSPSHSDTVE
FFQRLSTESLFFIFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQ
GTYIYFDYEKWGQRKKEGMTFEYRYLEDRDLN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaaggaaattgcaagttgagattgataggtgcttgaagaaagtgggtgag
ggtgtggagactttcgatgacatttggcaaaaggttcataatgcaactaataccaatcaa
aaagaaaaatatgaagcagacttgaagaaagaaatcaagaagttacaacggttacgagac
cagataaaaacatggatggcttcaaacgacatcaaggacaagcagatccttatggataat
aggaaactcattgaaactcaaatggaacgctttaaagtagtcgaaagagaaacaaaaact
aaagcttactcaaaagaaggtttaggtgctgctgccaaattagatcccattcaaaaagag
aaagatgaggtcacatcatggttatctcataatatcgaaaatttgaacatccaaatcgat
caatttgaatgtgagattgaaacgttgatggtggggtctaaaaagaaaaagttagaccga
gataagactgagaaagtagatgcgttcaggctatggttagaaaggcatcgatttcatgtt
cggcagctagaaacattaatgcgaatggttgataatgatgcccttgaattagaccagctg
aagaaaattaaagaagatgttgagtattatattgaggcaaaccaagagcccgatttcgag
gagaacgaattcatttatcatgacattgacattgaggatattggtacgctagttgcgaca
tcacccacagaagaagatggttttacgaacatgtcaggaacgccaacgtcgacaaattca
agttcaccttctcctagtcccggcctctctaaccattccaaggacgatgataggaaaagg
cataagtcggaagaggtacggcgcagcatttcggcccaggaaaggtcaaaaaataataca
aacattaaaatgccatcaactccaacaaaattatcaagttcgtcagggacgtcaataata
ggaagcagtaaccataatacgatagcatcgcctccgccaggtcctgggtatgcacatgct
gcacagcaaaatagtaatgcaggtccaggttcaatgcactcccagatgacttcaattcca
aaatacaataggtttcctcctacatgtaggcaggagttgtctaacaactcattgttttcc
tatgattccaagccaatgatgaactccatagaccactcattagcaaacagtctaggaccg
attatcacatcaccgacggtgaccacagcagtatcagaatctttaataactagccaatca
gttatacctcctgccccatcacccagcttgataatgactgcgcagcccactgtatcaagt
gtgataacgaatgcaacaagtagtatgccgatgccaaataacatgagcaattcagtcatg
ccagagattttgatgaatggaccagcgagtgcaggggggaaccttccaaacgacacgtca
tcctcacccacagatgccatgtcttcactgaaatcaatagcacagcaagcgctcatgaaa
ttccatgaaggaggattagagttgcccacttcggagtcggaaggcgaacctcctagtgtc
atggaaaatatgaacagcggtttctttctgaataatacatctgagcctgccacgccatcc
cccgaaatttcactgcagtctcaacaaccgcagccaccccaacccccaccaccaacacaa
cagcaaccaacccagcaacagactccaccacagcagccacctcaggcaccaccacctcca
cccccacagcaacagcagacgacgacgattcatctaaacccgttattgggcgttgcgcca
ttaggccctcagccactaacaaaggaacactgctatcaatcggcaatgctggagtccgga
tttcatcatcagccacacccgtcagattctgaaaggttacggcaataccttccacataac
ccctgcccaaccccagcatactatcctcaggtttcgccatctcattcagatacggtggag
ttcttccagaggttgtcaacagaatcacttttcttcattttctactacatggagggaact
aaggctcaatacttagcagctaaagctctgaaaaaacaatcttggaggtttcacactaag
tacatgatgtggtttcaacggcatgaggagccaaaaacaataacagacgaatatgagcag
ggcacatacatctatttcgattacgagaagtggggccaacggaaaaaggaaggaatgacg
tttgaataccggtaccttgaagatcgagacttgaactga
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