Lineus longissimus (bootlace worm): 135495700
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Entry
135495700 CDS
T09977
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135495700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llon02000
]
135495700
Transporters [BR:
llon02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
135495700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
SMC_N
AAA_29
AAA_22
AAA_15
nSTAND3
AAA_30
nSTAND_NTPase5
cobW
DLIC
Motif
Other DBs
NCBI-GeneID:
135495700
NCBI-ProteinID:
XP_064640631
LinkDB
All DBs
Position
1:complement(27968522..27986013)
Genome browser
AA seq
1720 aa
AA seq
DB search
MVQAGFLVQLKALLRRNILLKRRKKSQTVQEFLLPVMFTLTLALFRLGWPDVKIMPAVPQ
ERNQIEPLTFPRLSTILATPNSSLVEAILDEIIKDVGGSERNYPAYILFSSEQEMIRHYM
NLSEERSLTVKGITFNNLEPALIDYTIRTAALSLPPLKEEFASSEYCREENYLGCPAAKY
RDCGFLELQTLINTALSRVMGNVTNLKLPSVSIQLLPKFQFKPSIAALRGLTAIILVFSY
SPLINFLLVNLVAEKEKKIRETMRIMGTLDAAYWFSWSIIYGVIVTIVTLVCTVIIKVTG
ILPKCDGIILFFLLLFYGITIMHLAFAMMPLFKKANVAGTVGTMATLLVGLLYLPINITS
TTGLTGIPETSISIAWQWVLCLLSPIALGLAVDKAQLLEVTHGGLHYNTITVGEFPVYGS
LVMLIIDCFLYALIAWYLERIVPGEFGPRQSAFFCFSKNYWMPRKKPHDNMESDHLVTNA
HGSSTAAVVHNPRSDVEDVSPELKGKEMVRIFSASKKFKKTIAVDNLSLDIYEGQITCLL
GHNGAGKTTLVNMLTGVMHPSSGSATVYGYDVSDPNEVALMRSMIGMCPQENCLFDSLSC
VEHLEVYASIKGVLAKDIKEKVLNALDDVGLGDKADAFAKDLSGGQKRKLSVAIALIGDP
KVVFLDEPSAGLDPSSRRHLWSLLKSFKKDRVIVMTTHFMDEADLLADRKAFISKGKLKC
CGSSLFLKNRFGIGYHLTMVIDNDANVSRITEEVSSHVERAKFVRRFGQELMFTLPFHDV
GSFAGLFSKFESSVGNDQVDFSTTLGIQSYGVSMTSLEEVFMKLEEAEEMTDHPEDGTSH
LKDIIIDVHRVRPEVKFTDKHSENQNLLESNPAVIGDKWGGIEMKPMGKRPTMPKFDEDK
TNSQFDRLYALGRLRGLQMWRNKKNIFYRILLPVFFILLGAVFPKFIKTADPASDLVHHI
EPHVYVKNPRDRSLPPLMYQNFTGRNIDGIVTGIRNQSLGIKMVDNDANFSSIAPHHIGL
SVWDFKGEVDGFYMNYTGLYNDTMVHSLPTMIAIVSNAIYQLVTNESSWKIETSAMMWPD
LRTVRTYRYRGGTLMTVLLWGMAMVIIPPGFTGEVAQDRVTKARSQLRISGVRLGTYWLT
YFLTHLSQFCVCALLTIAIALIIQADSLKSPGAMICLVLLYIIYMPTLTLLAYILSFPFK
RHETALTVVSNLFLVCAVIPFFLVMTLVLTEAGATTVHIILCFIDPPYALYGGLVFLELT
FLAAVHRNAELGAGNEAPNVPLGEYLKWENNILVVFIAGIVQFFVFFILLVVLDVYSTGV
SLMDVFPCIKTKKALRPLENPDIPQSEDADVSNERQKVDSILPDGEEKPPIILRNLRKTY
KKRKAGFCSCCGNWVAAKTPAVRNVSFAVEEGEVFGLLGPNGAGKTTTLNTILAETAPDK
GRVCVGGHDIRSSLSEAYEALGYCPQHDPLWEDVTLEEHIKCYAAIRGVPNENIATLTKF
FLESLKLEDHSKKVAKSLSGGTKRKLCYILSMLGNPQVVLLDEPSTGMDPKSKRFLWNTI
SGMFAGSEKGAILTTHYMDEADVLCSRVGIMVNGLLQCIGSTQHLKGKYGSGYILALKVN
ASIPTRLEELKGQLHDFVIEHFPHAVLVEGFGNMVTYKILKDDIQSLAKVFAALEDGKSR
MSIEEYSFSQSTLEQVFLNFAKNQLILDEDPNIIDLPVTA
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atggtccaggcaggtttcttggtgcagctaaaggctctcctcaggaggaacattttgttg
aagaggaggaaaaaatctcagactgttcaggagttccttctgcctgtgatgttcactctg
acgctggccttgtttcgtctcggatggccggatgtaaagatcatgccggccgtaccacag
gagaggaaccagattgagcctttgacattcccgaggctctcaacaatcctggcgactcca
aacagctcacttgtcgaagcaatcttggatgaaataatcaaggacgttggtggaagtgaa
cgcaattatcctgcatacattttgttcagttctgaacaagagatgatccgtcattacatg
aacctatcagaagagagatcactcactgtgaagggtatcacgttcaataacttggagccg
gcgttgattgactacacgatacgtactgcagccttgtcactgccaccccttaaagaagaa
tttgcttcatccgaatattgtcgagaggagaattacctgggctgcccagctgccaagtat
agagactgtgggttcctagagcttcagactcttatcaacacagccttatccagggtgatg
ggtaatgtgacgaatctcaaactaccatcagtctcgatacagttactacctaagttccaa
ttcaagcccagcattgcagcattgagaggcttgacagcaatcatccttgtcttctcgtat
tcaccgctcatcaatttcttattggttaatctcgtggcggagaaagagaagaagatacgc
gagaccatgaggattatgggaactcttgacgcagcatactggttctcctggagcataatc
tatggcgtcatcgtcaccatagttacgctagtgtgtactgtcatcatcaaggtgacgggt
atcctccccaagtgtgatgggattatcctcttcttcctcctcttattctacggtatcacc
atcatgcacttggccttcgccatgatgccgctcttcaagaaggccaatgtagctggcacg
gtcggcacaatggcaacacttctagttggattgctttatttgccaatcaacatcactagt
acaacaggcctaacggggattcctgagaccagcatatcgattgcttggcagtgggtcttg
tgtcttctctcaccaatagccctaggcttagcagtggacaaggcacagcttcttgaggta
acccatggaggcttgcactacaacacaatcacagtcggggagttccctgtctatgggtcc
ctggtcatgcttatcatcgattgcttcctgtatgctctcatcgcctggtatcttgagaga
atcgtgcctggagagtttggacctcgccaatctgccttcttctgtttctccaagaactac
tggatgcctcgtaagaagcctcatgacaacatggagagtgatcatctggtgacgaatgct
catggctcaagcacggcagcagttgtccacaacccaaggagtgatgttgaggatgtctca
ccagagttgaaggggaaggagatggtcagaatttttagtgcctcaaagaagttcaagaaa
acgatagcggtcgacaatcttagccttgacatctacgagggacagatcacatgtctcctg
ggtcataacggagctggtaagacaactctggtcaacatgttaacaggcgtcatgcatcct
tcctccgggtcagccacggtctatggatatgatgtatccgacccaaacgaggtcgcatta
atgaggagcatgattgggatgtgtccgcaggagaactgtctgtttgattcactcagctgt
gtggagcatttggaggtgtatgccagcatcaagggggtacttgccaaggatatcaaagaa
aaggttctaaatgctctggatgatgttgggcttggcgataaagcagacgcgtttgccaaa
gacctgagtggtggacagaaacgcaagctgtctgttgcgattgctttgattggagaccct
aaggtggtattcttggatgaaccatccgctggcttagatccttcctcccggcgccacctg
tggtctctcctcaaatcattcaagaaggatcgtgtcatcgtcatgacgacacacttcatg
gacgaagctgaccttctcgcagacaggaaagcattcatcagtaaaggcaagctgaaatgt
tgtggctcatctctctttctcaagaaccgatttggaattggttatcatctcaccatggtg
atagacaatgatgccaacgtcagccgaatcactgaagaagtctcgtctcatgttgagaga
gccaagtttgtcaggcgatttggacaagaattgatgtttacgctgccatttcatgatgtt
ggaagcttcgcaggtttattttccaagttcgagtcgtctgttgggaatgatcaggtagat
ttctccacgacattaggaatacagagctacggtgtctcaatgacctccctggaggaagtc
ttcatgaagttagaggaagcagaagagatgacagatcatccagaagacggcacatcacac
ctgaaggacatcatcattgatgtgcatcgtgtacggccagaagtgaaatttacagacaaa
cactctgaaaatcagaatctactggagtcgaatcctgcggttatcggtgataaatggggt
gggattgagatgaaaccgatggggaaaagacccactatgcctaagtttgatgaagacaag
acaaactctcaatttgaccgactctatgcactcgggcggctccgtggcttacagatgtgg
cgaaataagaagaatatattctaccgtatcttgttgccggtgttttttatcttgctcggt
gcagtgtttcctaaattcatcaagacagcagacccagcaagtgacttggtgcatcatatt
gagccgcacgtgtatgtcaagaaccctcgcgaccggtcgctgccacccctcatgtatcaa
aacttcacgggaagaaacattgacggtattgtgacaggaattaggaatcaaagccttggg
atcaaaatggttgacaatgatgctaacttctccagcattgctcctcatcatatcggactc
tcggtctgggacttcaagggagaagttgatggcttctacatgaactacacaggactctac
aatgatactatggtccactctctgccaaccatgattgcaattgtcagcaatgccatctat
caactagttaccaatgaatcatcgtggaagatagagacctcagcgatgatgtggccagac
ttacggactgtgaggacataccggtatcgtggtggcacactgatgacggtgctattgtgg
gggatggcgatggtcataataccccctggattcactggggaggttgcacaggacagagtg
acgaaggcaagaagtcagctgaggatctccggagtaagactgggtacctactggttgacc
tacttcctcacccatctctcacagttctgtgtttgtgctctattgacaatcgctattgct
ctcattatacaggcggattccctaaaatcgccaggagctatgatttgtttggtgctactc
tatatcatctacatgcctactttgacgttactcgcatacatcctatcattcccgttcaag
aggcatgaaacagctcttacagtggtttccaatctcttccttgtgtgtgccgtgattccc
ttcttcttggtcatgacgttggttctgactgaagccggtgccaccacagttcatatcatc
ttgtgtttcattgacccaccgtatgctctctatggaggtctggtctttctggaactgaca
ttcctggcagctgttcaccgcaatgccgagcttggggctggcaacgaggccccaaacgtg
cctctcggggaatacctcaagtgggaaaacaacattttggttgtcttcattgctggtatc
gtccagttcttcgtgttcttcatcctcctggtggtcctggatgtatacagtaccggtgtc
tctctcatggatgtcttcccctgcatcaagaccaagaaggctctaagacctcttgaaaac
cctgatattccacaatcagaggatgctgatgttagcaatgagcgccagaaagttgacagt
atacttcctgatggtgaagagaagcctcccatcatactgagaaacttgaggaagacctac
aagaagcgcaaagcaggcttctgttcttgctgcggcaactgggtggcagcgaagactcca
gctgtacggaatgtctcattcgcagtcgaggagggagaggtatttggtttactgggaccg
aacggagccggtaaaacaaccacactgaatacgatactggcagagacggcaccggacaaa
ggcagggtgtgtgttggaggacatgacattcgatccagcctatcagaagcgtatgaagct
ctgggttactgtcctcagcacgaccctctctgggaggatgtcacccttgaagaacatatc
aaatgctatgctgcaatcaggggggttcctaatgagaacattgcaaccctaacgaaattc
tttcttgagtccctcaaactggaggaccactccaagaaggtagcaaagtctctttctggt
ggaacgaaaaggaagctgtgctacatattgagtatgctaggcaatccacaggtagtcctt
ctggatgaaccatctactggcatggacccaaagtcaaaacgattcctctggaacacgatc
agtggaatgtttgcaggtagtgagaagggagccatcttgaccacacattatatggatgaa
gccgatgtgctctgctccagagttggcatcatggtcaatggccttctacagtgtattggt
tccactcagcatttgaaagggaagtatggcagtggttacatcctggcgttgaaagtcaat
gccagcataccaactagacttgaggagctgaagggacaacttcatgacttcgtgatagaa
catttcccacatgctgtcctggtggagggatttggtaacatggtcacgtataagatattg
aaggatgatatacaatctttggccaaggtttttgcagctttagaagatggtaaaagtcga
atgagtatagaagagtacagcttcagtcagtcaaccctagaacaagtctttctcaacttt
gcaaagaaccagctgattctggacgaggatcccaacatcattgatctaccagtgacagcg
tga
DBGET
integrated database retrieval system
