Lineus longissimus (bootlace worm): 135495726
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Entry
135495726 CDS
T09977
Name
(RefSeq) uncharacterized protein LOC135495726
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135495726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llon03041
]
135495726
Enzymes [BR:
llon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135495726
Spliceosome [BR:
llon03041
]
Complex C
Other components
Step II factors
135495726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
KH_DEAH11
DEAD
IBR
OB_NTP_bind
IBR_1
KH_DEAH11_2nd
AAA_19
RRM_1
AAA_22
zf-RING_UBOX
UvrD-helicase
zf-C3HC4_2
AAA_30
HA2_N
HA2_C
Helicase_RecD
RBD_DEAH11
SLFN-g3_helicase
Nup35_RRM_2
RL
IBR_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
135495726
NCBI-ProteinID:
XP_064640668
LinkDB
All DBs
Position
11:complement(15544123..15556763)
Genome browser
AA seq
1805 aa
AA seq
DB search
MSKDVHLKGVAKNEGAQNGDSESEATRERTAVVTEVEEDLVTKVVTRNDSNPVIPIEAAD
MAASKVHVEHPNDRGSRNEIVLIATDPSDDLKQRSSLPKDMGRERGVGPPEQAEKCCAGN
EKKRKEKQGVTIIVNFAANELKRKPVKPYLTQTFQGEVKFRMGKIEKKCHVFAVRIELEN
RDSAYKALVLLRSSDRNMIVDYRIDFELENCSDLNYELQMKSLSDLERHDARIGEEYKRL
QSIIPVEATIFSKKELQSVMLERRNIEQKLMELTRQRDEFVIFMGCISNRLIGHETVGCA
EAKLIRQSFGVECCRLKQALPMFARRGDIVNTVMSQQVTIVLGETGSGKSTQIVQYLYQA
GFAGDGKIACTQPRKVAAVSLTERVSEEMKSRIGDVVGYKSGNRGKFGDQTKILYMTDYT
LLTEFIQDPELSEYNCVVIDEAHERSLYTDIVLGMLKKLLLRRRELHIIISSATMDTKLF
QAYFAEFDARVLEISGRTFPVEVVWPSRNWKGLSKFPVQDTIAKVREIHKTEEGGDILVF
LTTPAETEKACELLSQDQGLECLPLHGKLQPQEQQRVFKPATAQKRKVVFATNCAETSIT
ISGIKYVVDTGLVKENRFDPIRNMNTLDIGKTSKSSVEQRKGRAGRIEAGKCFRLFTEEE
HKKMEASNKPEILRVQVGHAILSLMSAGVPNPLQFDFVQSPGMDALEAAMAELVSIGAVV
DGSLTDLGRKISKLQLCPRLGKLVIEGIEQDIAMEAMVVASVCTMSGSMFFRMGSDEEKE
KADIRKLPFCHAAGDLLTCMDVYRAWKDIDERRKNQWCFENSINAKAIRIIKETLMEMLR
TLEREPGIQIKRAFKEDKEEADRMIQKSIFSCFKLNLCRFGGHQRIGYLSCQEGEQAGVL
HPSSALRFLDQKPKWLVYDSILKTSQKFILNVTTVDDSWVAEAIKSGLVDIDLPRIEEKI
LATTRMAEFGYMVMKKLTENKYAVCNSLQKELTTKFDSPVFLEIRNAPGTLDIIAKKQHH
ESIKGIIKETVEPEKKSIKRKEIPGSLNGMSTRFVFGSGYQVNLVLGEGEYRSVLVKMDP
STHRDISKFEVLEYFAAFGEIRDHFIFNSQKSNKGQWNMQDKAIRWGKITFSTMDEAMVA
VGATEGETVFAVPDLQGGKPRKDNHAEYLMRFKYCRRRSKGRGFVRFKSPDDAIRACSNI
GSFRVRDSYASLKHDFQDDNLTKVFIDKIDHAADENELKTALHDALGCHNGSIEDIVLYR
EKSCDSKPTTQAEIYAFKRDMKEAIDDFLTPENREQYHINIKPLTKPGNIHLLGTIFFHT
LEAFEMVAPHLPEGKKLCLHRNMERRFELTHHITTSFSVPREMYDAIETCFEEVNSILHE
FDQHEMEVQFGAWQGNIIRISLSSHHARSHKQAIKWYQEILEGDQIPTHSPLMEFVFTTD
GEKEMKHIMKVTGAYIALDKRMKTLSIHGSEPAREKAKIDLNGFLDKMEDNKPKVIKLQD
EKQPKGLMKKVVQTFGCELQEVKRIPGMTEAVFDMRKRLLKVCGNDNALETVCQRVKELA
DEIGQGSPGDADEDEIACSVCFAEFEDNFKTMYRLQVCGHPYCLDCIKRQIEYARTNKEY
PITCCGEDCQEPMALQDIWKIHPKQDEAVHTKLQMASLEAFVRKNRLKYRFCPTPNCQGV
YKVTKNEDAIAVFRCELCSVAVCSCCHSQHPGISCRINKKFKEEEASDEAVLRKWKAQDP
KKHKTCPKCHIMIEKTVGCNRMDCDACKTTFCWLCLEIFRSHNDCYDHLTKAHGGIFEVH
ELYQE
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggacgtacacttgaagggtgttgcgaaaaatgaaggggcgcagaatggagat
tcagaatcggaagcaactcgagagagaacagctgtagttacagaagtggaagaggatttg
gtgaccaaagtagttacgagaaatgacagcaacccagtcattcctatcgaggcagctgac
atggcagccagcaaggttcatgtggaacatcctaatgacagaggtagcagaaatgagatt
gttttgatagcgactgatccatctgatgacctaaagcaacggtctagccttccgaaggac
atgggaagggagagaggagtaggccctcccgagcaagcagagaaatgctgtgcaggcaat
gagaaaaaaagaaaagaaaagcagggtgtgactatcattgtgaactttgctgctaatgaa
ctcaaaagaaagccagtaaagccataccttacacagaccttccaaggagaggtgaagttc
aggatgggtaaaatagagaagaagtgtcatgtgtttgctgtccgaattgaattggagaat
agagactcagcatacaaggcgttggtcctccttagatcaagtgataggaacatgattgtt
gattacagaattgacttcgagctagaaaattgttcagacttgaactatgaactgcagatg
aaaagcttgtctgacttggagaggcatgatgcaagaattggtgaggaatacaagaggttg
cagtccatcattccggttgaggccaccatctttagtaagaaagagctacagagtgttatg
cttgagaggcgaaacattgagcagaaactaatggaactgacgaggcagagggatgagttt
gtcatctttatgggatgcattagcaatcggttgatagggcatgaaacagtaggatgtgca
gaggcaaaactcataagacagtcatttggtgttgaatgctgccgactgaaacaagcatta
ccgatgtttgccaggcgtggagacattgttaacacagtcatgtcacaacaggtaacaatc
gtcctcggagagacaggctcaggcaagagtacacagattgttcaatatctctaccaagca
ggttttgctggtgatggaaagatagcatgtactcagccacgtaaagttgctgcggtaagc
ttgacagagcgtgtctctgaggagatgaaaagtcgtattggggatgttgtaggatataaa
agtggtaacaggggaaagttcggtgaccagacaaagattctctacatgacagactacacc
ttgttgacagaatttatccaggatcctgagctgagtgaatataactgtgtagttattgat
gaagcacatgagcgaagcctctacactgacattgtcctagggatgctgaagaaactgctt
ctgcgacgaagagagctacacatcatcatcagctctgctacaatggacaccaaactgttt
caagcgtactttgctgagtttgatgcgagggttttagagatttctggcaggacattcccg
gttgaagtggtgtggccaagtaggaactggaagggattgtccaagttcccagttcaagac
actattgctaaagtacgggagatccataagacagaagagggtggtgacatcctggtcttc
ttaaccactccagcagaaaccgaaaaggcatgtgagttattgtcacaagatcaaggattg
gaatgcttgcctctacatggtaagttacaaccacaggaacaacagagggtcttcaaacca
gctacagctcaaaagagaaaggttgtctttgccacaaattgtgcagagacatcaataacc
atttctgggatcaagtatgtggttgatactggcctagtaaaggaaaacaggtttgaccct
atcagaaatatgaataccttggatatcggaaaaacaagcaagagctccgttgagcagagg
aaaggccgggctggtaggattgaggcaggaaagtgctttcgcctcttcactgaggaagaa
cataaaaagatggaagcctcgaacaagcctgagatactgcgtgtgcaagttggtcatgcg
atattgagtttgatgtcggctggagtccccaatcctctacagtttgacttcgtccaatct
ccaggaatggatgctcttgaagcagccatggcagagttggtgtccattggtgctgttgtt
gatggtagcctcactgacctgggcaggaagatatcaaagctccagctatgtcctaggtta
gggaagttggtgattgaagggatagagcaggacattgctatggaggccatggtggttgca
tccgtctgcacgatgtctgggagcatgttttttcggatgggtagtgatgaagaaaaagag
aaagctgacatccggaagcttccattctgtcatgctgcaggtgacctattaacatgcatg
gacgtgtaccgggcttggaaggacattgatgagcgcaggaagaaccagtggtgttttgag
aactcgatcaatgccaaggcaattaggatcattaaggaaacactaatggaaatgctcaga
acattggagagggagccaggaatacagataaaacgtgcattcaaggaggataaagaagag
gcagacagaatgatccagaagtccattttctcctgcttcaagttaaacctctgtcgtttt
ggtggacaccaacggattggttacctgtcctgtcaagaaggagaacaggcaggagttcta
catccttcatctgccttgagattcttggaccagaaaccgaaatggttggtatacgacagc
atattgaaaacatcgcaaaagtttatactcaatgtaacaacagttgatgactcctgggtt
gcggaggcaataaaatcaggcctagtggacattgaccttccaagaattgaagagaagata
ctggccacaaccagaatggcagagtttggttacatggtgatgaagaaactgacggagaat
aaatatgctgtctgcaactccctgcagaaagaactgaccacaaaatttgacagtccagtt
ttcttagaaatacggaacgcaccaggtaccttggacataatcgcaaagaaacagcatcat
gagtcgattaaaggcatcattaaggaaactgttgagccagaaaagaagtctataaagaga
aaggaaataccgggatcattgaatggaatgagtacccgatttgtgtttgggagcggttac
caagttaaccttgtccttggagagggagagtacaggagtgtgttggtgaagatggatccc
agcacacatagagatatttcaaaatttgaggtcttggagtactttgcagcatttggagaa
atccgggaccactttatcttcaatagccaaaagtcaaacaagggacaatggaacatgcaa
gacaaagcaatacggtggggaaagattacattttcaacgatggatgaggccatggtggct
gtaggagcaacagagggagagactgtgttcgctgttcctgatcttcagggagggaagcca
aggaaagacaaccatgcagaatacctgatgcgattcaagtactgcagacgtcggtctaaa
ggaagaggctttgtgagattcaagagtccagatgacgccatcagagcctgtagtaacatt
gggtcattccgagtacgagactcctacgcttcacttaaacatgattttcaggatgataac
cttacaaaggtattcatcgataagatcgatcatgctgcggatgaaaatgaactaaagaca
gcattgcatgatgcactcgggtgtcataatggatccattgaagacatagtactttacaga
gagaaatcttgtgattcaaagccaacaactcaagctgaaatctatgcattcaagagagac
atgaaagaggctattgatgactttctcacacctgagaacagggaacagtatcacatcaat
ataaaacctttgacaaagcctggtaatatccacttactaggcaccatcttcttccacaca
ctcgaagcctttgaaatggttgcaccgcatctacctgaaggtaagaagctttgcctacat
aggaacatggaacgacgatttgagctgacacaccacatcacaacatccttttctgttcca
agggagatgtatgatgcgatagaaacctgttttgaagaagtcaattctattcttcatgag
tttgatcagcatgaaatggaagtccagtttggtgcatggcaaggcaatatcataaggata
tcactgagtagccatcatgcaagatcacacaagcaagctatcaaatggtaccaggagata
ttggagggtgatcaaatcccgacacacagcccgttgatggagtttgtctttacaacagat
ggagagaaggagatgaaacacataatgaaggttactggggcttacattgcgttagacaaa
cgcatgaagactttgtccatccacggcagtgaaccagccagggaaaaggcaaagatagac
ctcaatggattccttgataaaatggaagacaacaaacctaaagttatcaaacttcaggat
gagaagcagccaaaaggtctaatgaagaaggttgtccagacattcgggtgcgagttacaa
gaggtcaagagaattcctggcatgactgaggcagtctttgacatgagaaaacgtctgctc
aaggtctgtggaaatgacaacgcattggagactgtttgtcagagagtgaaagaattggct
gacgagattggtcaaggttcccctggagacgctgatgaagatgagattgcctgttccgtc
tgctttgcagagtttgaagacaatttcaagacgatgtaccgcctccaggtgtgtggacat
ccctactgtcttgactgcatcaagcgacagattgagtatgcccgaaccaacaaggaatac
ccaatcacgtgttgtggtgaagactgccaggaacccatggctcttcaagatatttggaag
atccaccccaaacaagacgaagccgtccataccaaacttcagatggcgtcgctagaagcc
tttgtcagaaagaacagactaaagtatcggttctgcccaactcccaactgccagggagtt
tataaagtcactaaaaatgaggatgccatagctgttttcagatgtgagctctgctcagtt
gccgtctgctcgtgttgccacagccaacacccggggatttcatgcagaattaacaagaaa
tttaaggaggaggaagcatcagacgaagccgtgttacgaaaatggaaagcccaggacccg
aaaaagcacaagacatgtccgaaatgccatattatgatcgagaaaactgttgggtgcaat
cggatggactgtgacgcctgtaaaacgacattttgttggttgtgtcttgagatattcagg
tctcacaacgactgctatgatcatcttacgaaagcccatggaggaatatttgaagtgcat
gaactttatcaagaatag
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integrated database retrieval system
