Lineus longissimus (bootlace worm): 135495811
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Entry
135495811 CDS
T09977
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03020
RNA polymerase
llon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135495811
09124 Replication and repair
03420 Nucleotide excision repair
135495811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llon03021
]
135495811
03400 DNA repair and recombination proteins [BR:
llon03400
]
135495811
Transcription machinery [BR:
llon03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135495811
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135495811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
135495811
NCBI-ProteinID:
XP_064640843
LinkDB
All DBs
Position
11:complement(3932488..3940474)
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AA seq
274 aa
AA seq
DB search
MPYANQSTLTISELTDENVKFIIEDTDLSCANALRRVFIAEVPTIAIDWIHIESNSTVLN
DEFICHRIGLIPLTSDDEVDRMQYSRDCTCEEFCERCAVEFTLDVKCTDDQTRHVTTADM
MSNNPKVVPVTSRHRDEESEYGETDDILIVKLRKGQEIRLRAFARKGFAKEHAKWNPTCG
VAFEYDPDNSLRHTTFPKPEEWPKSEYTELEEDQAEAPYDPTGKPNKFFFNVESCGSLRP
ENIVFSGMYQLKKKLTDLQVHLSQEIQSDVLTIT
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgccaatcagtcgacactgacgatatcagaactaacagatgaaaatgtgaag
ttcatcatagaagataccgatctgagctgtgcaaatgcattgagaagggttttcatagca
gaagttccaacaatagctattgattggattcacattgaatccaactcgaccgtactgaat
gatgagttcatctgtcatcgtattggccttattcccctgaccagtgatgacgaagttgac
cgtatgcagtactctagggattgcacctgtgaggaattctgcgaaagatgtgcggtggaa
ttcacgcttgatgtcaagtgcacagatgaccagacccgccatgtcaccacagccgatatg
atgtccaataatcccaaggttgtgccggtgacatcccgccacagagatgaagaatcagag
tatggtgaaacagacgatatcctgattgtgaaactgcgtaagggccaagaaatcagacta
cgtgcattcgccaggaaaggattcgccaaggaacatgcaaaatggaatccaacgtgtggt
gtggcattcgagtatgatccagataactcattgaggcataccacttttcctaaaccggag
gaatggccaaaaagcgaatacacagaattagaagaagatcaggctgaagcaccatacgac
cccacgggaaagccaaacaaattcttctttaacgtagagtcttgcggatccttacgacca
gaaaacattgtgttctcgggaatgtatcagctcaagaaaaaactcaccgatcttcaggtt
catctgagtcaagagatacagagtgatgttttgacaattacgtaa
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