Lineus longissimus (bootlace worm): 135496069
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Entry
135496069 CDS
T09977
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135496069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135496069
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
135496069
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
135496069
NCBI-ProteinID:
XP_064641255
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Position
11:2072507..2074777
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AA seq
217 aa
AA seq
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MATHVRASPAGWPRTNSVTHRQHSTSPQIDRFINLYPLTNYTFGTKDPLYEKDSSVAARF
ARMKEEFQKVGMRRSVEGVLIVHEHGLPHVLLLQLGTTFFKLPGGELNLNEDPVDGLKRL
LTETLGRQDGAPMDWTIEDTIGNWWRPNFEPPQYPYVPAHITKPKEHKKLFLTQLPEKAL
FAVPRNYKLVAAPLFELYDNSAGYGPIISSLPQALSR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacacgtgagagcttcgccggccggctggccaagaactaattctgtgacccac
agacagcacagcacgtcccctcaaatcgatagattcattaatctgtacccactcacaaac
tacacatttggaacaaaagatccactgtatgagaaggacagctctgtggccgccaggttt
gcgcgtatgaaggaagagttccagaaagttggcatgagaagatcggttgaaggtgttctg
atagtgcatgaacatggtctgccacatgtgctattgttgcagcttggaacaacatttttc
aaattacctggtggagaactaaatctcaatgaggatcctgtggatggcttgaagcggttg
ctgaccgagacgcttggtcgacaggatggggcacccatggactggaccatcgaggacaca
attggaaactggtggaggccaaactttgaaccaccgcagtacccatacgtccctgcccac
atcactaagcccaaagaacataaaaaactcttccttacgcaactgccagagaaagcactt
tttgctgtcccaagaaattacaagttagtggcagcacctctgtttgagttatatgacaat
tcagctggatatggacccatcatttccagtctcccacaagctctcagcaggtaa
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