Lineus longissimus (bootlace worm): 135496320
Help
Entry
135496320 CDS
T09977
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03013
Nucleocytoplasmic transport
llon03015
mRNA surveillance pathway
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135496320
09122 Translation
03013 Nucleocytoplasmic transport
135496320
03015 mRNA surveillance pathway
135496320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135496320
03041 Spliceosome [BR:
llon03041
]
135496320
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135496320
Spliceosome [BR:
llon03041
]
Complex C
Other components
EJC/TREX
135496320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
DUF4326
SAP
Motif
Other DBs
NCBI-GeneID:
135496320
NCBI-ProteinID:
XP_064641649
LinkDB
All DBs
Position
11:complement(1612815..1624867)
Genome browser
AA seq
859 aa
AA seq
DB search
MADGEAGSLVLGGRPIGELRVADLKKELEGRGLSKTGVKKELVQRLSESLLKERGSESGD
DSDGHQERGRKQNAGRGHSSSRSSSGSSSSGSESRSRSRSIDDKSSSSSDSESRSRSRSA
SSSSSSAPGSPSPKKQSSSKKMEKPGRGVDNGTSRVEEMKESSAQRSPLKLKIRMDMASP
ERSHVETVVPLAFKEKKKEPKAVEKQAPEPSKPEADTTKDEKQPKVEEEDMDVGSPQKEK
DVEVESPKRRISIEDSQGDKRITVDSSKEDQQIAVTSVKDDRRIVQEKEEDESNDSQPNS
TTTDVLDVKETDEIERKEEDLKQEPRPPRKRRWGGRKVSPKRQISISSESLKGLIPDVKP
ILAVDTPAEVEVVKEEAASDHEKEDGEAEDDGDDDDEHKDMKIRRTVTQVVSSEDRREVL
AEEDHLKVQEDMEIPDVEPKVKSPPQIIRKLSRSKPLVVADEPQKARRSPSPPKHPTSRV
IHIRNLVRPFTLRQLKELLERTGKLTEGGFWIDKIKSHCLVMYETDLDASKTRQALHNTK
WPLSNPKNLSVDFSTEAELENFQDADKPIKREVPNEAAVRDRERERREKERDMDQRNRRE
PPIERRPSGREWDRAKVVQRSPSPRVKSRDRSRSREPKRQPKESRVKERKERKEKKVQDE
EPPAKLLDDLFRKTKATPSVYWLPLTEQQALEGERRRIQEALDRDKRRQELEERMHAERK
KREMERLDRRKREQMAQRKRIDTKWRKTMRVENINKANLIKLGYRDLAHWLEDDNHVYVG
RNLHKMVPSYSKPGGEKWGNPFNMQTYSREECCQRFEQYAREKLVGQLHELTGKVLGCWC
HPLACHGDVLIKLHKEFIG
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagaagctggttctttggtcctcggtggaaggcctattggcgaactcagg
gtcgctgatctgaaaaaggaactggaaggaaggggtttatcaaagacaggagttaagaaa
gaattagtacaacgactttcagagtctcttctcaaagaacgaggcagtgagtctggagat
gatagcgatggacaccaagaaagaggaagaaaacaaaatgcaggtcgtggccactcatca
tcaaggtcttcttcaggttcatcaagttcagggtcagagtcacgttcaaggtcacgaagc
attgatgataagtcaagttctagttctgactccgagtcgaggtcaaggtcgcggtctgcg
tcttcaagttcatcctcggctccaggctccccatcaccaaagaaacagagttcatccaag
aagatggaaaaaccggggcggggtgtggacaatggcacgtcacgagttgaagagatgaaa
gaatcctcagcgcagcgcagtcctctcaagttgaagatcaggatggatatggcatcacca
gagagaagccatgttgaaactgtcgtccctctggcattcaaggagaagaagaaagaacca
aaggctgtggaaaaacaggcgccagagccctcaaaacctgaagcagatacaactaaggac
gaaaaacaacctaaagttgaagaggaagacatggacgtcgggagcccccagaaggaaaaa
gatgttgaagtagagagccccaagagaaggatttccattgaggattctcaaggggataag
aggatcacggtcgatagctccaaagaagatcagcaaattgcagtgacaagtgtgaaggat
gatcgaaggattgttcaggagaaggaagaagatgagtccaacgacagccagccaaactca
accacaacggatgttcttgatgtgaaggagactgatgagattgaaaggaaggaagaggat
ttgaagcaggagcctcggccaccgaggaaacgccgctggggcggtcgcaaggtctcaccc
aagagacaaatatcgatctcgtccgaatctctaaagggtctgattcctgatgtgaagcca
atcttggccgtggacacaccagcagaggtagaagtggtgaaggaagaggctgcgtcagac
catgagaaggaggatggagaggctgaagatgacggggatgatgacgatgagcacaaggat
atgaagatcaggaggacagtcacacaggttgtcagcagtgaagacagacgtgaagtactg
gctgaggaggatcatttgaaggtgcaggaagatatggagatacctgacgttgaacccaaa
gtcaaatctccaccacagatcatccgtaaactcagtcgtagtaagcctctagtggtggca
gacgaaccccagaaggcacgccggtcaccgtcgccaccaaaacatccgaccagccgtgtc
atccacatcagaaacttggtgcgaccgttcacactgcggcagctgaaggagcttctggag
aggacaggcaagctgaccgagggcggcttctggatcgataagattaagagtcactgtctt
gtcatgtatgaaactgatttggacgcctcgaagactagacaagcattacacaacacaaaa
tggccgctttctaatccaaagaatctcagtgttgacttctccacagaggcagagcttgaa
aatttccaggatgctgataagccaatcaaaagagaggttccaaatgaggctgccgtcaga
gatcgtgagcgagaacggcgggagaaagagcgcgacatggatcagcgtaatcgccgtgag
ccaccaatagaaagacggccatccggccgggaatgggatcgtgcaaaggtcgtgcagagg
tcaccgagtccacgagtgaaatctcgcgacaggtcaaggtcacgagaacccaaacggcag
ccgaaagagagtcgcgtgaaagagaggaaggagcgtaaggagaagaaggttcaggatgag
gagccgccagccaagctgctcgatgatctgttcaggaagaccaaggcaacaccatcggtc
tactggctcccactcacagagcaacaggctctagaaggtgagcgtcgtcgcatccaggag
gcgctggatcgagacaagagacgacaggagttggaggaaaggatgcatgcggagaggaag
aaacgagagatggagagactcgacaggaggaagcgggaacaaatggcacaacgaaaacgg
atcgacacaaaatggaggaagacaatgcgagtggagaatatcaacaaagccaatctcatc
aagttggggtaccgcgacctggcgcactggttggaggacgataatcatgtctacgttgga
cgcaacttacacaagatggtgcccagctactcaaagcctggcggtgaaaagtggggcaac
ccattcaatatgcagacttactcaagggaggaatgttgtcagaggtttgagcagtatgcc
cgggagaaacttgtcggacagttgcacgagttgacagggaaagtgttggggtgttggtgt
catccactcgcatgtcacggggatgtgctgatcaagttacataaggaattcatcgggtag
DBGET
integrated database retrieval system
