Lineus longissimus (bootlace worm): 135496688
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Entry
135496688 CDS
T09977
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135496688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135496688
03012 Translation factors [BR:
llon03012
]
135496688
Enzymes [BR:
llon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135496688
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135496688
Translation factors [BR:
llon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135496688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_19
nSTAND3
AAA_14
AAA_22
Cas3-like_C_2
Rad17
ATPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
135496688
NCBI-ProteinID:
XP_064642225
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All DBs
Position
12:12502104..12511411
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AA seq
841 aa
AA seq
DB search
MAQRRHVQETMRRLNLNASPPPPTEDKDDRFRRELEEKQNNEHYQKMQEIRKKLPVYDNA
KLICGTIAARKNQVVVISGETGCGKSTQVPQFILDDYIMNGMGSHCRIVCTQPRRISTIN
LAHRVAEERAERCGGDNSSVGYQIRLEAEKPRENGSILFCTTGIMLKRLESDKYLDRVSH
LILDEIHERDINSELLLIIMKEILPHRENMKLILMSATLRAELFSQYYNNCPMLEIPGRI
YPVQEYNLEDVVEMISYNHRTEYRPAPRKPERRAFEAWLHSLDPVKYSDTTKRIVDELSS
SNDIALHLVKELIRYISQTQGDGAILVFMPGWGPMAELQDMMMKEQLFKSDCFVFHLMHS
GLMSTEDLQKAFECPAEGVRKVVIATNVAETSLTIDDIVYVIDCGKVNLKMYEVRRNLSE
LRTVPNCLANCRQRKGRAGRLRPGVCYYLFTSFEHKRLKEYHEPEILRIRLEELCLQIKL
LRPDDKIIPFLDNAMKAPPRSTVEKSIELLFQLNAFEGDEKLTPLGTQLAQMPVNPQISK
MIVFAAVFCCLDPILTVAACIDYKSPCYMPKAEDQRLEADKKKRILARGTHSDHLMFINA
YNGWCEAKRHGNSKDFCKEFFLSPNILKELKKRRTQFADILVEQGFINSAEDEDANVNME
NENLLRAVLCVGLYPNVGLINTQRRVEALGAHYYKVITYGEEVKLAKKSVNCDQPIPEPF
IVYFEMMKTSKIFIFDSTGISLNPLIFFGRDLQIKSRTKDENINMAVDNWTQFETTVEKA
LELQNLRQALWSVLGKKFNNPGPTDWSEMEEEGQVMKKVLRFITEDVSVAVGDEADGAGM
Y
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcgacgacatgttcaagaaacaatgcgaagattaaatttgaatgcctcgccc
ccgccgccaactgaagacaaagacgaccgattcagacgcgagttggaagagaaacaaaac
aatgaacattaccagaaaatgcaggaaattagaaaaaaactaccagtttatgataatgca
aagctcatctgtggcacgatagcagccaggaagaaccaggttgtggtgatcagcggggag
acgggctgtgggaaaagtactcaggtgcctcagtttatccttgatgattacatcatgaat
ggtatggggtcacactgccgtattgtgtgtacccagccgagacggattagcaccataaat
ttagcgcaccgcgttgctgaggaaagagcagaaagatgtggtggagataacagcagtgtt
ggataccaaataaggcttgaggctgaaaaacccagagagaatgggtccatcctgttctgt
acaactggaatcatgctaaaaagactagaatctgacaagtacctggacagggtgtctcac
ctcattctagacgaaattcacgagcgtgatatcaactctgaactgctgctgattatcatg
aaggaaattctaccgcaccgagagaacatgaaactcatcttaatgagcgcaacactgaga
gcagaactattttctcagtattacaataactgtcctatgttggagatacctgggagaatc
taccctgtccaggaatacaacttggaggatgtggtggagatgatcagctacaaccatcgt
acagaatatagacctgccccacgcaaacctgaacggcgggcatttgaagcttggctacac
agtctcgacccagtcaaatattctgatacgacaaaaaggattgtcgatgagctttcaagt
agcaacgatatcgctcttcatctcgtcaaggaactcatcagatacatctcccagacgcag
ggcgatggcgcgatcctcgtctttatgcccggttggggtccaatggctgagctccaggac
atgatgatgaaagaacagctgttcaaatcggattgttttgtttttcaccttatgcatagt
ggattgatgtccactgaggatctccagaaggcctttgaatgtccagcggagggagtgcgg
aaagttgtcattgcgaccaacgtggcagaaaccagtcttacaatagatgatattgtgtac
gtcattgactgtggcaaagtgaacttgaaaatgtatgaagttcgacggaatctctccgag
ttgaggacggtaccgaactgcctcgctaactgccggcagagaaaggggcgggcaggaaga
ctaaggcctggtgtttgctactacctgtttacgagttttgagcataaacgactcaaagag
taccatgagccagagatcctgcgaatccgattggaggaattgtgcttacagataaagtta
ttgaggcccgacgacaagatcatcccattcctagacaatgcaatgaaggcacctccacgc
agcacagttgagaagtctatcgagctcctcttccaattgaatgcttttgaaggtgacgaa
aagctcacccctctgggcactcaattggctcaaatgcctgtcaacccgcagataagcaag
atgatcgtatttgcagcagtgttctgttgtcttgatccgatccttacagtggcagcatgt
attgactataagtcgccatgttacatgccaaaggcggaagatcagagacttgaagctgac
aaaaagaagcgaattctagcccgaggaacccacagtgaccacctgatgtttatcaacgcg
tataacggatggtgtgaagccaagcggcatggaaattcaaaggatttctgcaaggaattc
tttctttcgccgaacatcttgaaggagctgaagaaacggcggacccagtttgcagacatt
ctggttgaacaaggcttcattaattcagcagaagacgaagacgcaaatgtcaacatggag
aacgagaatcttctacgagctgtcctctgtgttggcttgtacccaaatgtggggttaata
aacactcagaggagggttgaggcattaggggcgcattactataaagtcataacatatgga
gaagaagttaaattggctaaaaagtctgttaattgtgaccagccaattccagaacctttc
atagtttatttcgagatgatgaaaacttctaagatcttcatttttgactccaccggtatc
tcgcttaacccgctgatattctttggaagagatctacagatcaagagtcgcaccaaagac
gaaaatatcaatatggcggtcgataattggacccagtttgaaacgactgtagagaaagcc
ttggaattacagaacctccgccaagcgctctggagtgttctcgggaagaagttcaacaac
cccgggccaacagattggagtgagatggaggaggagggtcaagtcatgaagaaagtcctt
cgctttattacggaagatgtctcagtggctgttggtgacgaggcagacggggctgggatg
tattag
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