Lineus longissimus (bootlace worm): 135496836
Help
Entry
135496836 CDS
T09977
Name
(RefSeq) calsyntenin-1-like isoform X1
KO
K22659
calsyntenin 1
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llon04515
]
135496836
Cell adhesion molecules [BR:
llon04515
]
Cadherins
Cadherin related
135496836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Toxin_R_bind_N
Laminin_G_2
Glyco_hydro_16
Motif
Other DBs
NCBI-GeneID:
135496836
NCBI-ProteinID:
XP_064642448
LinkDB
All DBs
Position
12:12437035..12473366
Genome browser
AA seq
989 aa
AA seq
DB search
MYSSWWCATLVGAVCLSLVSTTSEPNAFSPVLINNGEAVQTYHGVISENQETVTLSPPLF
ASDSDKLGGAKFICGYKLFRLDDQHIPFGVELKNHTSGEAYLVLNPKEKLDFEKRQNYAF
SIVAYDCGSPELQSDSARVHIRVLEVARPSWERESYFAKIEEGPHAEPLLKVTASETRTA
EQNKICSYKVITPNVPFEVDNQGNIRLAEGEDLKYDEQHNHILAVEAIDCQNRTSKPVMV
NIQVYKKCDLGWKGIPNRIEYEPRSGRNAFAEHAKFDKCEVPCEPERVSSSVFLTTKHIG
KGCDRDTYSIKSQRKLCEDLGDNGASAGSVDLLPTPDLFSSWTKDLPHDDGKESDQIYAF
DGKTNAVQIPDGKINHTMGSHFTVMAWLKHEQNVEDTKRGEKEHIMCNADGEEMNRHHYS
VFVHNCRLVFLLRQEYSKGHLNIFKPAEWRWRIPEICDNEWHHYAISVDFPQIRLYIDGS
PFIETKRNPEIIDDWPLHKTKEIHFTKLVVGACWQGGEKTLSQHFKGYMAGLSILRGKTE
SDRVIKCLNNCKEKLDFHAVYLMDGGMSISYNSEMTQISINGHNITEVQRILSQVGYINF
RTFPTPGRRNLKITTNIKCKNSGVIKVPDVNSYIQVLDGQTPKITIGGIKTLAKKEEELE
KIGQQIFPDLIIMTSMGAENEKETKEKTAERFASYLFKSKVFANAEPPQPQTAEDHKQEY
KLDSCVVKTFPPMSADEKLNVPENAIHAMGLEASVSKSGIVITGADKMINYETVLREVHY
LNRNPAAMTKRSFTLTCSELNGRFVSNDFEVTVEVIHSLPEAHTHADHAQANNQANHLPN
YKAYDTNKNTGSTGERVGTNAVQGTSVGMFIIIVVCVGFLIFMIILGVIRIRTFHKRVQV
LQVDEKQEMEWDNSALTITVNPMESDDMGMGAGMSNFDEFATESLALRDDSDSEDDDGSS
YHDDIESSEDEAEKVKDSQLEWDDSTLTF
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtattcctcttggtggtgtgccacccttgtgggtgccgtgtgtctaagccttgtttca
accacatcggaacctaacgccttctcaccagtgctaataaataacggagaagctgtccag
acgtatcatggcgtcatttcagaaaatcaggaaacggtgacgttaagcccaccacttttt
gccagcgatagtgataaattaggaggggcaaagtttatttgtggatacaaattattccgg
ttggatgaccaacatattccgtttggagtggagttgaaaaatcacaccagcggtgaagcg
tacttagttttgaatcccaaagaaaaattagattttgaaaaacggcaaaactatgccttc
agtatagtagcatacgattgcggatctcccgaactgcagtcagacagtgcacgcgttcac
atcagggtactggaagtagcgcggccatcgtgggaaagagagtcatatttcgctaaaatt
gaggagggccctcatgcggaacccctcctcaaggtgactgcatcagagacgaggacggcc
gaacagaacaagatctgcagctacaaagttataacgccaaatgttcctttcgaggtcgac
aaccaaggaaacatccgcctggcagaaggagaagacttgaaatacgatgagcaacacaat
cacattctcgctgtcgaggcgatcgattgtcaaaatcggacgtcgaagccggtcatggtc
aatatccaggtttacaagaagtgtgacttgggttggaagggtatcccaaacaggattgaa
tacgagcctcgatccggccgcaacgcttttgccgagcacgccaaattcgacaaatgtgaa
gtcccatgcgagccggagcgagtgtcctcgtccgttttcctgacgacgaagcatatcggc
aagggatgcgatcgcgatacctactcgatcaagtcacagaggaagctttgtgaagattta
ggtgataatggagcaagtgcaggcagtgtggatctgttgcctacccccgatctcttctcc
tcctggaccaaagacctcccccacgacgacggcaaggagagcgaccagatctacgcgttc
gacgggaagaccaatgcggtgcagattcccgacggcaagatcaaccacacgatgggcagt
cacttcaccgtcatggcgtggctgaagcatgagcagaatgtcgaggatacgaagcgcgga
gagaaggagcacattatgtgtaatgccgacggtgaagagatgaatcgccatcattactcc
gtgttcgtccacaactgccgtctggtgttcctcctgcgccaagagtacagcaagggtcac
ctgaacatcttcaagcccgccgaatggcgctggaggattccagagatctgcgacaacgag
tggcatcactacgccatcagcgtcgatttcccgcagatccgcctctacatcgacggcagc
ccgttcatcgagaccaagcggaaccccgagatcatcgacgactggccactccacaagacc
aaggaaattcacttcaccaagcttgttgttggtgcctgctggcagggcggggaaaagaca
ctcagccagcacttcaagggctacatggccggcctctcgatcctccgtggcaaaacggag
agcgaccgcgtcatcaagtgcctgaataactgcaaggagaaactggacttccacgccgtc
tacctgatggacggtggtatgtcgatttcctacaacagcgagatgacccagatcagcatc
aacggacacaatatcacggaggtgcagcgcatcttgtcgcaagttggctacatcaatttc
cgcacgttcccaacacctggtagacgaaacctcaagatcacgacgaacatcaagtgcaag
aacagcggcgttatcaaggtacccgacgtaaacagctacatccaggtcctcgacggccag
actcccaagatcacgatcggcggcatcaagacgttggcaaagaaggaggaagaactcgaa
aagatcggccagcagatcttccccgacttgatcatcatgacctctatgggcgcggagaat
gagaaggagacgaaggaaaagacggcagagagattcgcgtcgtatttgttcaagagcaag
gtgtttgcaaatgctgaacctccgcagccacagacagccgaagaccacaagcaagaatac
aagctcgattcctgcgtcgtgaaaacattcccgccaatgtccgccgacgagaaactgaat
gtacccgagaatgccatccacgccatgggacttgaagcgtccgtcagcaagagcggaatc
gttatcactggcgccgataagatgatcaattacgagacagtcctgcgcgaggtgcactac
ttgaacaggaatccagcagccatgaccaagcggtcgtttacgctgacctgctcggaattg
aacggtcgatttgttagcaacgactttgaagtcacggttgaggtgatccactcactgccc
gaggcccacacccatgcagaccatgcccaagcgaacaaccaggccaaccacctccccaac
tacaaggcttacgatactaacaaaaatacgggtagcaccggtgagcgcgttggaactaat
gctgtacagggaacaagtgtaggcatgttcatcatcatcgtcgtgtgtgttggcttcctc
atcttcatgatcatccttggcgtcatccggatccggacgttccacaagcgtgtgcaggtc
ctgcaggttgacgagaaacaagaaatggaatgggacaactcggcgttgaccatcacggtc
aacccgatggaatcggatgatatgggcatgggagcgggcatgagtaattttgacgaattt
gccacggagtcccttgcactccgtgacgatagtgacagcgaggatgacgacggttcaagt
taccatgacgacatcgaaagttcagaagacgaggcggagaaggtcaaggacagccagtta
gaatgggacgactcaacattgacgttttga
DBGET
integrated database retrieval system