Lineus longissimus (bootlace worm): 135496837
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Entry
135496837 CDS
T09977
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135496837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135496837
03012 Translation factors [BR:
llon03012
]
135496837
Enzymes [BR:
llon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135496837
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135496837
Translation factors [BR:
llon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135496837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
nSTAND3
AAA_19
Myosin_head
AAA_23
Adeno_IVa2
NYN
ATPase
AAA_22
TssR_C
NPHP3_N
Rad17
Motif
Other DBs
NCBI-GeneID:
135496837
NCBI-ProteinID:
XP_064642453
LinkDB
All DBs
Position
12:12475508..12486329
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AA seq
824 aa
AA seq
DB search
MSLNAGNARQGITSDPALDERFKREFYEKQTNDFYQEMQRERQKLPVFKEAKAICESIEY
SRHSQVTVISGETGCGKTTQVPQFILDDYITRGQGSRCRIVCTQPRRISAMSVAHRVAVE
RSERMGGADSTVGYQIRMESERPREKGSILYCTTGIVLKWMESDPLLKTVSHIILDEIHE
RDIHSEFLLVILKGILAQRPDLKLILMSATLNAEKFSRYYGGCPVFKIPGFLHPVEEHYL
EDVVEMTSYRPSRTFRGRGGPHKTQFQSWLNSTSYSYQTKETLAAMYNNNMIDLDIIVSL
IRIICLKEEGAILVFLTGWDQITQLLDKLLSHYYFQTDRFLILPLHGGMMSMEEQQQVFL
TPSPGVRKIVLSTNVAETSITIDDVVYVIDCGKLKIKNYDARKNISTLDDHWNSVANSKQ
RRGRAGRVRAGHCYHLYTRHQKERLVEQHKPEMLRTRLGDLCLQIKLLRHEKIMDFFDQA
MEKPAVDAIERSIRHLRNLKALDVYGELTPLGVQLARMPVDPHIGKMLLFAAIFGCLEPI
LSVAACLDHKVPFTTPPKKEAKLRADTMKRELAEGTCSDHLMFSNAIRGWQKAKVCGRSD
LDSYLYKYFLSSDTLRELKKRREQFAQILNEIGFISTDQPSDRDANKNSSNTKLLRAVVC
AGLYPNVGIIKTKRLLIPGLGQHYYTIDTGDEEVELHVKSVNCAQPIPFDYIVYFQKMKT
KKLYIFDSTGISLNPLIYFGEDLKLSNMDSNRNIDVAVDSLVKFKTTVATAREIETLRRD
LWEVLKKKFENPCPTDWADDENEGFVMNTFLEKITQDASVAISG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttaatgctggaaatgcacggcagggtattacatcagacccggccctggacgag
aggtttaagagggagttctatgagaagcagacaaatgacttctatcaagagatgcagaga
gagaggcagaagttgccagtcttcaaagaagcaaaggctatttgcgagagtatagagtat
tccaggcatagccaagtgactgtcatcagcggggagacgggttgcggtaaaactacgcag
gttccccagttcatcctggatgattacatcaccagaggtcaggggtcaaggtgccgtatc
gtctgcactcaaccgcggaggatcagtgcgatgtctgtggcgcatcgtgttgcagtggag
cgatctgaaagaatgggtggcgcagatagtactgttggatatcaaattcgaatggagagt
gagaggccaagggaaaaggggtcaatattgtactgtactacaggaatagtactcaaatgg
atggagtccgaccccctcctgaaaactgtctcccacatcatactcgatgagatacacgag
agggacatccattctgagttccttctcgtcattctgaagggcatcttggcccagcggcca
gacctcaagcttattctcatgagcgccacattgaatgcggagaagttttccagatactat
ggtggctgtccagtgttcaaaatccctggattcctccatcctgttgaagagcattacctc
gaagatgttgtggaaatgacatcgtaccggccaagtcgcaccttccgtggtcgtggagga
ccccataagacacagttccagtcgtggcttaactcaacaagctattcgtatcaaaccaag
gagacactggcagcaatgtacaacaacaacatgatcgacctagatatcattgtctcgttg
atccgaatcatctgcttgaaagaagaaggtgccatcttggtgtttctaaccggctgggac
caaatcacccagctcctcgataagttgttgtcgcactattacttccagacggatcgattc
cttattttaccgctccacggcggcatgatgtccatggaggagcagcaacaggtgttccta
accccgtccccaggggtgaggaagattgtgctgtctacgaatgtcgcggagacgagcatt
actattgacgacgtggtctacgtcatcgactgtggtaagttgaagatcaagaattatgac
gcgaggaagaatatctcgacactagacgaccactggaatagtgtggcaaactccaaacag
aggcggggaagggctgggagagtaagggcgggccattgctaccacttgtatacccgccat
cagaaggagagactggtcgagcaacataagccagagatgttgaggacgaggctgggagac
ctctgtctccagatcaagctcttgcgacatgagaaaatcatggatttcttcgaccaagcc
atggagaagccggctgttgatgcgatagagcgctccattagacatctgagaaatctgaaa
gcattggatgtctacggagagttgaccccactcggcgtccagttagcccgaatgccagtc
gaccctcacatcggcaagatgctcctgtttgctgccattttcggatgtctggaacctatc
ctgagcgtggctgcgtgtttggaccacaaggttcccttcactacgcccccaaaaaaggag
gctaagctgagggctgacacaatgaaacgagagttggcggaggggacgtgcagtgaccac
ctgatgttcagtaatgctattagaggctggcagaaggcaaaagtttgtggccgcagcgac
ctcgacagctatctgtacaagtactttctctcctcggatacattacgggagctgaagaaa
cgccgagaacaatttgcccaaattctcaacgaaatcggtttcatctcaaccgatcagcct
tcagacagggacgccaacaagaactcctctaacacgaagctactccgtgccgtcgtttgt
gcgggactttatcctaacgtcgggatcatcaaaacaaaaaggttattgattccaggtctt
gggcaacactactacactatcgacactggtgacgaggaagttgagcttcatgtcaagtcg
gtgaactgtgcgcagcccattccattcgactacattgtctacttccaaaagatgaagaca
aaaaagctgtacatctttgattccactggcatctctctaaaccctctgatctacttcggt
gaagatctgaaactcagtaatatggattccaacaggaacattgatgtggccgtcgacagc
ttggtcaagtttaagacgactgtggcaacggccagagagattgagactctccgtagagac
ttgtgggaagttttaaagaagaagtttgagaatccgtgccctacggactgggccgatgat
gaaaacgagggctttgtgatgaatacatttttggaaaagatcacgcaagatgcctcagtt
gccatcagtggatag
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