Lineus longissimus (bootlace worm): 135497080
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Entry
135497080 CDS
T09977
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135497080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135497080
03012 Translation factors [BR:
llon03012
]
135497080
Enzymes [BR:
llon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135497080
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135497080
Translation factors [BR:
llon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135497080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
ATPase
AAA_23
AAA_19
NB-ARC
NACHT
ABC_tran
Motif
Other DBs
NCBI-GeneID:
135497080
NCBI-ProteinID:
XP_064642857
LinkDB
All DBs
Position
12:14959846..14968844
Genome browser
AA seq
1124 aa
AA seq
DB search
MLQLFRLQTAKVQSEFWSLQAKYVLAGIGNFYTLSRGDFGQMDRYSGGRGGGGRYEEGSL
FDYKDRRGRGSRRGRGGRKYGNKTRRPPLTPEQEEERAKERERQGGPPRGLRGRDIGMWY
ASRGRAKNKERERLERPEITIGRDKLRNLSRMVDSFKDDDAGYKPRLSHSARPRNVPSSS
AGSSHDNQAANFGRDRPGSSRLDKNSFESSTWNDHGRFSGQSRNGSSESRSWREQEPAPS
SSGAAAVSDLLDDEPLEGPENVAAIRQYLSERSDYDVSEIEMLEDDKLEELQRRVQQNTE
EDKRYLREFEAKQSEPRYQKMQQFRKKLPSYDMAEDILKTVGANQVTVISGETGCGKTTQ
VAQFILDDFIKQGLGSLCRVVCTQPRRISAISVAQRVAQERADDCGGPDSSVGYQIRLEV
KRPRPRGSILFCTTGIVLKWLESDPLLTHASHIILDEIHERDLHSDFLMIIMKEILPKRP
DLKLILMSATLNAEQFSQYYGQCPMLNIPGFTFAVEELYLEDVVEMLKYQPPEQTNQPRK
KRPRSQEDRQKIEEEKWNYDAWLRNLECSPRTQNALTRMDSDQIDLELIAELVRHIMTTK
GDGAILIFLPGWEQISKLYKMLEGDRLFNSRNSILLPLHSLMPTVNQREVFDRPPQGVRK
IVIATNIAETSITIDDVVYVIDCGKIKLKNYDAANNVATLQPEWNSLANSRQRRGRAGRV
QPGVCYHLYTRYQHEKLEDYQLPEMLRTRLEELCLQIKLLKRGKIEPFVQKAMQPPPMES
VLRSIELLHQLNALNLDEELTPLGHHLARMPVDPHTGKMILFGAMFGCLDPILTVAASLS
FKDAFVIPMGKERMADLKKKELAQNTCSDHLMLVNAYNGWLAARAKGRDQAYCWDNFLSS
STLWMLTNMRKQFADLLFDLGFISTKSPTDADVNINAGNNKLLRAVLCAGLYPNVGKIPS
QRKKGSKVKRIWKIFTKNDGRVNIHPKSVNYEEPFPYKWLVYYLKMKTTKVYLYDATAIS
PYPLLFFGGDITIKNVDGDECVVVDDWIVFKASQKIASLVKDLRHELDKVLQDKVQRPGP
TNWAKTSKEGQVMRAILDLLTTEDYGEIEDVQQGMDEQDADDEY
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaattatttcggctgcaaacggctaaagtacagtctgaattttggtctttacaa
gcaaaatatgtattagcaggaataggaaacttctacacgctttctagaggggattttggt
caaatggacagatattcaggaggacgaggtggtggaggtagatatgaggagggttcactg
tttgattacaaggaccgcagaggacgtggatcgagacgagggcgaggaggaagaaagtat
ggcaacaaaacaagaagacccccactgacaccagaacaagaggaggaaagagccaaggag
cgtgaacgtcagggcggcccacccagaggtcttcgaggacgtgatattggcatgtggtat
gcctcaagaggcagagcaaagaacaaagagagggagcgtttggagagaccagaaatcaca
atcggccgagacaagttaagaaatctttccagaatggtggatagtttcaaagatgatgat
gctggctacaagcctaggcttagtcactctgctaggcctagaaatgtgccaagttcttct
gcgggatcaagccacgataaccaggctgcaaactttgggcgagatcgacctgggtcttct
cgtcttgataaaaacagtttcgaatcttccacatggaacgaccacggtagattttcaggg
cagtctagaaatggttcgtctgaatctagatcttggcgagagcaagaaccggctccaagt
tcttcaggagctgcagcagtttctgatcttcttgatgatgagccattagaagggcctgaa
aatgttgcagctattcggcaatacttatcggagcggtcagattatgatgtcagtgaaatt
gagatgcttgaggatgacaaattagaggagttacaacgacgggtgcaacaaaacacggaa
gaagataaaagatacctgcgagagttcgaagcaaaacagtctgaaccaagatatcaaaag
atgcagcagttcaggaagaagttgccttcatatgatatggctgaggatattcttaaaacg
gttggtgccaaccaagtgactgtgatcagtggtgagacaggctgcggtaaaaccactcaa
gttgcccagtttatcttggacgacttcatcaaacaaggcttaggatcactgtgtcgtgtt
gtttgtacccagcctcgtaggatcagtgcgatatcagtcgcgcagcgcgtggcccaggag
agagctgacgattgtggtggacctgacagcagtgttggttatcagataaggctggaagtg
aaaagaccaagaccccgaggttctattctgttctgtacgacaggaattgtcctcaagtgg
ctcgagtcagaccctttgctgacccacgcctcccacatcatcctggatgagatacatgaa
cgcgatctccactctgatttccttatgataatcatgaaggagatactccctaaacgaccg
gacctgaaactgattctgatgagcgcgaccttaaatgcagagcagttctctcaatattat
ggtcaatgtccgatgttaaacattcctggttttacctttgcggtcgaggagctttacttg
gaggatgtggttgaaatgcttaagtaccaacctccggagcagacgaaccagccgaggaag
aagcgaccgaggagtcaggaagacagacagaagattgaggaggagaagtggaattatgac
gcctggctcagaaatctggagtgttcccctcgcacacaaaacgctctcactcgcatggat
tcagatcagatcgacctggaactaattgcggagttagtccgacacatcatgacaacgaag
ggcgatggtgctattttaatctttctgcctggatgggaacagatctctaaactttacaaa
atgttggaaggtgaccgattgttcaattcgaggaattcaatccttctgccgctacattct
ctgatgccgactgttaatcaacgggaggtgtttgaccgtccgccgcaaggtgttcggaaa
attgtcatagcaacgaatattgcagaaacgagtataactatcgatgatgtggtttatgtg
atagactgtggaaagatcaaactcaagaactacgatgctgcaaataatgtggctacatta
caaccagaatggaatagtttagcaaactctcgacagcgtagaggaagggctggcagggtg
cagccaggggtatgttatcatctctacacaaggtaccagcatgagaaactagaggattat
cagcttcccgagatgctcaggactaggttagaggagctctgtctacagatcaagttactg
aaacgaggaaagattgaaccgtttgtccagaaagccatgcagccaccgcccatggagtct
gtgcttagatccattgagcttctgcaccagttgaatgcgttaaacttagatgaggagctg
acaccccttgggcaccacctagcacgtatgccggtcgaccctcacacgggaaagatgatc
ctatttggtgccatgtttggatgtctcgatccgatactgaccgtcgctgccagtcttagc
ttcaaagatgcatttgttattccaatgggcaaggaaaggatggccgacctgaagaagaag
gaattggcccagaacacctgtagcgatcaccttatgttggtcaatgcgtacaatggatgg
ttggcagctagagccaaggggagagatcaagcctattgctgggataacttcctatcatcc
agcaccctgtggatgttgacaaacatgaggaagcagttcgctgatttgctctttgatctc
ggtttcatatcgaccaagtcacctacagatgcagacgttaacatcaacgctggtaacaac
aaactcttacgagccgtgttgtgtgctgggctgtacccaaacgtggggaagataccgtct
caaagaaaaaaaggcagcaaagttaaacgaatttggaaaatcttcaccaagaacgatggt
cgcgtgaacattcatccaaagtcggtgaattatgaagaaccatttccttataagtggctt
gtatactatctcaagatgaagacgactaaggtgtacttatacgatgccacagccatctcg
ccgtaccctctactatttttcggtggtgacatcacgataaagaatgtggatggcgacgaa
tgtgttgtcgtggacgactggattgttttcaaggcgtcgcagaagattgcttctctagtc
aaggatttgcgacatgaacttgataaggtgctacaagataaggtccaacgacctggccca
acgaactgggccaagacgtccaaagagggccaggtaatgcgggcgatactagatctcctg
acgactgaggattacggagaaatcgaagatgttcaacaaggaatggacgaacaagacgca
gatgatgaatattga
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integrated database retrieval system
