Lineus longissimus (bootlace worm): 135497121
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Entry
135497121 CDS
T09977
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135497121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135497121
03012 Translation factors [BR:
llon03012
]
135497121
Enzymes [BR:
llon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135497121
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135497121
Translation factors [BR:
llon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135497121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ
Helicase_C
OB_NTP_bind
DEAD
HA2_C
HA2_N
AAA_19
ResIII
nSTAND3
ATPase
NPHP3_N
SHE3
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
135497121
NCBI-ProteinID:
XP_064642918
LinkDB
All DBs
Position
12:12487015..12501607
Genome browser
AA seq
1066 aa
AA seq
DB search
MTDHYKTLGLNQGASVEEIKKAFRKLAKKWHPDKNKSSSATEKFQQLRAAYDALMEQKKR
GKSEAGSSSRPPGSSSRPNRAQAGGSSRPNGTQAGGSSRPNGTQAGGSSRPNGTQAGGSS
RPNGAQPGGSSRPNGGSSRPNGTQAGGSSRPNGAQPGGSSRPNGAQAGGSSRPNGAQAGG
SSRPNGGSSRPKGAQAGGSSQSFGGFRNFTRPTGGYDEESDEDTGYQRRQQQGEGPGFGF
RRYQPADSEESDISDEESESDDEWSDISDDSSDDGETVDDCLRRQPNLDRKYQQEFQEKQ
TDDSFQKMQEVRRNLPAHSYTERICETVAANQVTVISGETGCGKTTQVPQFILDEFIRKG
QGSQCHIICTQPRRISAVSVAQRVADERAEVAGGNESSVGYQIGLEAERPRKTGSILFCT
TGIVLKILESNPLLKDVSHIVLDEVHERDLDTDFLLTIVKYILPKRPNLKLILMSATMNA
QRFSRYCGHCPTLEIPGRTFPVKKFFLEDAIELTKYKPKKTWPKPRSREFFDFERWVRRL
PDKYARSTKDVLLNSFNCNHIDCDLMAAVIRYIATEKDRENSEKGAILVFMPGWDDISKL
YDTLMSRQLFRSDAFLILQLHGSMMPREEQDLVMVRPEEGVRKIIISTNVAETGITIEDV
VYVIDSGKSKLSYFDPRKNMCSLQTVSSSKANSTQRRGRAGRVCAGECYHMYTAHQEKKL
VQYHKPEILRSRLEDACIRIKLLGRSSIMSLFKRAMDRPSKESILRSIEFLKQLDALDED
EELTPLGVHLGSLPVDVRIGKLLIYGALFCCLDPILTIAACFEDKAPFVAPLDKRSEADA
QRLIMADGTSSDHLMWVNGYNGWVNAGRNKEKKEYCQDNFISNYSMWQVNKKRQQLAESL
FKLGFIGSKSPSDHDANRNSDELNVVRAVLSASLHPNIGPIVVDKVNEHTGQYDYYIRSQ
DEKVYIHPKSVNFQKPIYENYGYVVYYLKLETTKVYIHDVTAISSVPWHFFRKNREGHYG
HKDICKDFSKVLRKKFENPAPTNWSQKHTEGKVMEYVVDYFKNDGQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcattacaaaacgcttgggctcaaccaaggagcctcagtagaagagatcaag
aaagctttcagaaaactggcgaaaaaatggcatccagacaaaaacaagtcaagcagtgcc
acggaaaagttccaacagcttcgtgctgcgtacgatgctttaatggaacagaagaaaagg
ggtaaatccgaagctggtagttcaagtagaccaccaggcagttccagccgaccaaatcgt
gcccaagctggtggttctagcagacccaatggtacccaagctggtggttccagcagaccc
aatggtacccaagctggtggttccagcagacccaatggtacccaagctggtggttccagc
agacccaatggtgcccaacctggtggttccagcagacccaatggtggttccagcagaccc
aatggtacccaagctggtggttccagcagacccaatggtgcccaacctggtggttccagc
agacccaatggtgcccaagctggtggttccagcagacccaatggtgcccaagctggtggt
tccagcagacccaatggtggttccagcagacccaagggtgcccaagctggtggttccagc
caatcatttgggggatttaggaatttcacccggcccactggtggctatgatgaagagagt
gatgaggataccggttatcagagaagacagcaacaaggggaaggaccgggattcggattt
cggcgctatcagcctgcagattcagaggaatctgatatcagtgatgaagagtctgagtct
gatgacgaatggtcagacatctccgatgattcatcagatgacggggagactgttgatgat
tgcctgagacgtcagccaaacctcgatagaaaatatcagcaggaattccaggagaaacaa
actgatgattctttccaaaagatgcaggaggttcggaggaatttgcctgctcatagttac
acagagcgtatttgtgagaccgttgccgccaatcaagtgaccgtgataagtggggaaaca
ggatgcggaaaaactacccaagtgccacagtttatcttggatgaatttatcaggaaaggt
caggggtcgcagtgtcatatcatctgcacccagcccaggaggataagtgccgtgtctgtt
gcccagcgcgttgctgacgaaagggcggaagttgctggtggaaatgaaagcagtgttgga
taccagattggcctcgaggctgaaagaccaagaaaaactggatccattctgttctgtact
actggaattgtcctcaaaattctggagtcgaatcctctactgaaagacgtctcccatatt
gtcctcgatgaagttcatgagcgcgatcttgacactgatttcctgctgactatcgtgaaa
tatattcttccaaaacgacccaacttgaagctaatcctcatgagtgcaacaatgaatgca
cagcgtttctcaagatattgtggtcattgcccgacgcttgaaatccctggtcggacattt
ccggtgaagaagttctttctcgaggatgctattgagttaaccaaatataaacccaagaaa
acttggcctaagcctcgatcaagagagttctttgattttgagcgttgggtgaggagactt
ccagacaagtatgctcgctccactaaagatgtgttattgaactcattcaactgtaatcac
attgattgtgatcttatggctgcggtaattcgatacatcgcgaccgaaaaggacagagaa
aacagcgagaaaggggcgatccttgtctttatgccgggatgggacgacatctcaaaactc
tacgatacgttgatgtcacggcaactcttccgatcggatgcttttctgattcttcaactc
catggctcgatgatgcctagagaagaacaggacttggtcatggtgcgtcccgaagaaggg
gtccgtaaaattatcatttctacaaatgttgccgaaactggcatcaccatagaagatgtg
gtgtatgtcatcgacagcggaaaatccaaactctcctattttgacccgagaaagaatatg
tgttctttgcaaacagtgtcaagcagcaaggccaactctactcagaggaggggcagggct
ggcagggtttgcgcgggggagtgttaccatatgtacactgcacaccaggagaagaagctt
gttcagtatcacaagccagagatccttcgatcaagactcgaagatgcgtgtattagaatt
aagttgttgggacgaagtagtatcatgtcattgttcaagagagcaatggatagaccttct
aaagaatctatactcagatctattgagtttcttaagcaattggatgctttagatgaagac
gaggagttgaccccccttggcgtccatctgggaagcctcccagtcgatgtgcgtatcggc
aagctgttgatctatggagcgttattctgctgcctggaccccatcttgaccattgcagcc
tgctttgaagacaaggcgccctttgttgccccattagacaagagaagtgaagctgatgcc
caaaggcttatcatggcagacggcactagcagcgatcatctcatgtgggtcaatggttat
aatggatgggtcaatgcggggagaaataaggaaaaaaaggaatattgtcaagataacttc
atctccaattattctatgtggcaagtgaacaaaaaacgccagcaattggcagaaagtctt
ttcaaacttggatttattggaagcaagtctccttccgatcatgatgccaacaggaatagt
gatgagttaaatgttgtcagggccgttctttctgctagtcttcatccgaatatcggacca
attgttgtggataaagtcaatgaacacactggccaatatgattattatatcagatcccaa
gatgagaaagtatatatccacccgaaatcggtcaacttccagaaaccaatctatgaaaat
tatggttatgttgtgtactacctgaaattggagactactaaggtgtacattcatgacgtc
acagcaatctcctcagtaccatggcacttctttcgaaaaaatagggaagggcattatggt
cataaggatatctgtaaagatttttccaaggttctaagaaagaaatttgagaatccggcc
cccactaattggtcgcaaaaacatacagaaggaaaggtcatggaatatgttgtcgattac
ttcaaaaatgatggacaataa
DBGET
integrated database retrieval system
