Lineus longissimus (bootlace worm): 135497584
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Entry
135497584 CDS
T09977
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llon04131
]
135497584
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
llon04147
]
135497584
Membrane trafficking [BR:
llon04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
135497584
Exosome [BR:
llon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135497584
Exosomal proteins of bladder cancer cells
135497584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
GATase
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
135497584
NCBI-ProteinID:
XP_064643412
LinkDB
All DBs
Position
13:16614321..16642706
Genome browser
AA seq
1264 aa
AA seq
DB search
MLTKFETKSARVKGISFHPKRPWVLASLHNGIVQLWDYRMCTLIDKFDEHDGPVRGICFH
QQQPLFVSGGDDYKIKVWNYKQRRCIFTLLGHLDYIRTTTFHHEYPWILSSSDDQTIRIW
NWQSRSCVCVLTGHSHYVMCAQFHPTEDMVVSASLDQTVRVWDISVAVQKFSGLRKKNVS
PGPGGLEDHLKNPNQTDLFGTSDAIVKHVLEGHDRGVNWACFHPTLPLIVSGADDRQIKL
WRMNEKGNQECPKGLGPETWARREAKAWEVDTCRGHYNNVSCAIFHPRQELIVSNSEDKS
IRVWDMSKRTGVQTFRREHDRFWILAAHPTLNLFAAGHDNGMIIFKLERERPAFAVNQNI
LYYVKERYLRKLDFTTSKDTAVMQLRGGSRTPVFSMSYNPAENAVLLCTRAGNVENSTYD
LYQIPKSSDSQNPDGLVPFGQSPDKSSPEGKRSSGLTAVWVARNRFAVLDRTHTIVIKNL
KNEITKKVQAPNCEDIFYAGTGCLLLKDSDGITLFDVQQKRSLASVKVTKVKYVVWSADV
QFVALLSKHGITICNRKMENLCTIHENIRVKSGAWEESGVFVYTTSNHIKYALINGDHGI
IRTLDLPIYITRVKGNSIYCLDRECRPRVLGIDPTEFKFKLALVNRKYDEVLHMVRNAKL
VGQSIIAYLQKKGYPEVALHFVKDEKTRFGLALECGKIDIALDAARALDDKNCWEKLGEV
ALLQGNHQVVEMAYQRTKNFDKLSFIYLITGNLEKLKKMMKIAEIRKDTSGHFQNALFLG
DVSERVRILKNCGQKALAYLTAATHGLDDEAEELKNQFDSQKENLPEVFPGATLLQPPPP
INQQESNWPLLTVTKGFFEGAMAARGAATGVSAMTAVAGGDEEGWGDDADLLLDEDGGFG
GGEGLDDEDLVGKADDGGGWDVGDEDLELPADLDVGPIAGGDDEGYFVPPTKGTSQAQIW
CNNSQLPVDHILAGSFETAMRLLHDQVGVVAFEPYKQVFLQTYARSRTAYANLPSTPPMF
GYPHRNWREAGAKGGMAAVGLKLNDLVQRLQGAYQMTTQGKFVEAAERFRSILLTIPLLV
VQNKQEIAEAQQLLEICREYIVGLSMELTRKDMPKSTLDEQKRICEMAAYFTHCNLQSVH
LILTLRTALNLFFKLKNYKTAASFARRLLECGPRPEVATQTRKILQACEKNPSDAHELKY
DQHNPFDICAASFTPIYKGKPVVKCPLSQACYHPQYKGEVCRVSKVTEIGKDCIGLRISQ
IQFR
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgaagttcgaaacgaaatctgcgagggtgaaaggtatttcctttcacccgaag
cgtccctgggttcttgcaagtctccacaacggtattgtgcagctatgggattaccgcatg
tgtactctgattgacaagtttgatgagcatgatggtcccgtcagaggcatttgtttccat
cagcagcagccgctgtttgtctcgggaggagacgactataagatcaaggtttggaactat
aagcagaggagatgcatctttacattgctgggacatctcgattatatcaggacgaccaca
tttcaccatgaatatccatggatcttgagttcatccgacgatcagacaatccgcatctgg
aactggcagtcaagaagctgtgtctgtgttttgacggggcacagccattatgtgatgtgt
gcccagttccacccaaccgaagatatggtggtgtcagcatctctggatcaaaccgtgcga
gtttgggacatctctgttgcagttcagaaattctctggcttgaggaagaagaacgtgtca
cctggacctggtggcttggaggaccacctgaagaaccccaatcagacggacctgttcggc
acctctgatgcgattgtcaagcatgtcctggaaggtcatgaccgtggagtgaactgggcc
tgcttccacccaacgctgccattgattgtctcgggggcagatgatcgacagatcaagctg
tggagaatgaatgagaaaggtaaccaagagtgccccaaagggttgggccctgaaacctgg
gcgaggagagaggcgaaagcttgggaagtggacacctgtcgcggtcattacaacaacgta
tcatgcgccatctttcatcctcgtcaggaactgattgtcagtaactcggaggataagagt
attcgtgtgtgggacatgtccaagagaactggtgtgcagacgttcagacgtgaacatgat
cgcttctggattctcgccgcccacccgactctcaatctgttcgccgctggtcacgacaac
ggtatgatcatcttcaagctggagcgcgagcggcctgcattcgccgtcaaccagaacatc
ttgtactatgtaaaggaacggtatctgaggaagctggacttcaccacgtccaaggacacg
gccgttatgcagctcagaggtggctcacggactcctgtcttcagcatgtcctacaacccg
gctgagaatgctgtcctcctctgcacgagagcgggcaatgttgagaacagcacatatgac
ttgtatcagattcccaagtcttcagattcacagaacccagatggcctggtgccttttgga
cagtcaccagataaatcatcccctgaggggaagcgctcgtcgggcctgacggctgtttgg
gtcgcaaggaacagatttgccgttcttgaccgaacacatacaattgtgatcaagaatctg
aagaatgagatcaccaagaaggtgcaggcccccaactgtgaggacatcttctacgccggt
actggctgcctcctactcaaggacagtgatggcattacactgtttgacgtccagcagaaa
aggtctcttgccagtgtaaaggtgaccaaagtgaagtatgtggtctggtcagccgacgtc
cagtttgtggctctgctcagcaagcacggcatcacaatctgtaaccgcaagatggagaac
ctgtgtaccattcatgagaatatccgtgtgaagagtggtgcgtgggaggagtctggcgtg
tttgtctacacgaccagtaaccatatcaaatatgctctcatcaatggagaccacgggatc
atccgtaccctggacctgcccatctacatcaccagggtgaaaggcaacagcatctactgc
ttggaccgcgagtgccgcccccgtgtcctgggaatcgatcccactgagttcaagttcaag
ttggctctcgtcaacaggaaatatgatgaggttctgcacatggtgcgcaatgccaagttg
gtcggccagtcaatcatcgcctacttgcagaagaagggctacccagaggtggcgctacac
ttcgttaaggacgagaagacacggtttggacttgccttggagtgtggcaagatcgatatt
gcccttgatgcggcgcgtgccctcgatgacaagaactgttgggagaagctgggagaggtg
gcgctactgcagggtaaccaccaggtggtcgagatggcctaccagcgaaccaagaacttt
gacaagctctcgttcatctacctgatcacaggcaacctggagaaactcaagaagatgatg
aagatcgctgagatccgtaaagatacgagcggccacttccagaacgctctcttccttggt
gacgtgtcggagcgagtgcgcatcctcaagaactgtggacagaaggcgctggcatacctg
acggctgccacgcacggtcttgatgacgaggcggaggaactcaagaaccagtttgattcg
cagaaggaaaacctacctgaagtgttccccggtgccaccctgctgcagccaccaccacct
atcaaccagcaggagagtaactggccgctgctgaccgtcaccaagggattcttcgagggt
gccatggctgctcgcggggcagcgacaggcgtgtcggccatgacagctgtggcaggcggt
gacgaggaaggatggggtgatgatgcggatctcctccttgatgaagatggtggatttggt
ggtggcgagggtcttgatgatgaggacctggttggcaaggctgatgatggcggtggatgg
gacgtgggtgatgaggaccttgagctgcccgctgatctggatgttggtccgatcgctggt
ggagatgacgagggatacttcgtaccaccgaccaagggcacaagccaggcccagatatgg
tgtaataattcacagctgccagtcgatcatatcctggctggctcgtttgagacagccatg
aggctgttgcatgatcaagttggtgtcgttgcctttgagccgtataaacaggtgttctta
cagacatacgctcgcagccgcactgcgtacgccaacctgccatcaacgccacctatgttt
ggttatcctcacagaaattggcgtgaggctggagcaaagggtgggatggcagcagtcggg
ttaaaactaaacgacttggttcagcggttgcagggtgcctaccagatgaccacgcagggc
aagtttgtggaggcggctgagcgcttccgctccatcctgctcaccattcctctcctcgtc
gtacaaaacaaacaggaaatcgctgaggcccaacaacttctcgagatttgtcgtgaatat
atagttggtttgagtatggagttaacacggaaggacatgcccaagtcaactcttgatgaa
caaaaacgcatatgtgagatggcagcctacttcacacattgtaatctccagtcagttcat
ctcatcctgactttgaggacagctctcaatctcttctttaaactaaagaattataagaca
gcggcatcatttgccagacgtcttcttgaatgtggaccgagaccagaagttgctacacag
acgcgtaagatcctgcaggcttgtgagaagaacccgtcggacgcccatgagctcaagtac
gaccaacacaatccatttgatatctgtgccgcatcattcacaccgatttacaagggtaaa
ccagtggtgaagtgtccgctaagtcaggcctgctatcatccgcagtacaagggcgaggtg
tgccgcgtatctaaagtcaccgagatcggcaaggactgtataggcctcaggattagccag
atccagttcagatag
DBGET
integrated database retrieval system
