KEGG   Lineus longissimus (bootlace worm): 135498600
Entry
135498600         CDS       T09977                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
llon  Lineus longissimus (bootlace worm)
Pathway
llon03018  RNA degradation
llon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:llon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135498600
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135498600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llon03019]
    135498600
   03041 Spliceosome [BR:llon03041]
    135498600
Messenger RNA biogenesis [BR:llon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135498600
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     135498600
Spliceosome [BR:llon03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    135498600
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 135498600
NCBI-ProteinID: XP_064644989
LinkDB
Position
14:complement(149320..151387)
AA seq 127 aa
MVLLVRTFTFFTFQHQQQRGERDQGQGDKEKKKKETILDLSKYLDRAIRVKFSGGREAAG
ILKGYDPLLNLVLDNTTEYLRDPDDPFKLTEDTRPLGLVVCRGTSVVLICPSEGMEMIAN
PFVSQEG
NT seq 384 nt   +upstreamnt  +downstreamnt
atggttttgcttgtgagaacgtttactttctttacatttcagcatcagcaacaacgaggt
gagcgtgatcagggtcaaggtgataaggagaagaagaagaaagaaaccatcttagatttg
tccaagtatctcgatcgagcaattcgggtcaaattcagtggcggacgcgaagctgctggc
attctaaaaggttatgatcccctcctcaaccttgtactcgacaacaccacagaatattta
cgagatccagatgatccattcaaactgacggaagatacacgaccacttggacttgttgtg
tgtcgagggacgtctgttgttttaatatgtccatcggaggggatggaaatgattgcaaat
ccttttgtgagtcaggaaggatga

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