Lineus longissimus (bootlace worm): 135498767
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Entry
135498767 CDS
T09977
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135498767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llon03036
]
135498767
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
135498767
REST complex
135498767
Heterochromatin formation proteins
Other heterochromatin formation proteins
135498767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
135498767
NCBI-ProteinID:
XP_064645252
LinkDB
All DBs
Position
14:complement(16163348..16184340)
Genome browser
AA seq
1369 aa
AA seq
DB search
MQKRPNDQESTEPERPVSSVNPASLARVIPPPGRLPEAMHSGLQQFPVQGFQVSQPSHHM
AQPIHQPAAPQPQVPVPAPVPTPVAVAAAAPVQTPNAPVHQPVQSQVHQQQTVHQAQAHA
QVHSYYNRQQEHHNWLVDETSAGAPKAHSAQVQGQQQQQFQRLKVEDALSYLDQVKLQFG
NQPQVYNDFLDIMKEFKSQSIDTPGVINRVSNLFKGHPDLIVGFNTFLPPGYKIEVNAAN
ETISVHQPGQQVMSISHATGSILPSAQPVATIPQPQQPPQHSSPGHVGATVPSHVTSSTH
HTYHHQRPPVPDIPSPQRDQNQQQATQPVEFNHAINYVNKIKNRFQGQPEIYKAFLEILH
TYQKEQRSLKDACSLMQGTVNTGYKPLTEAEVYSQVAKLFQNQEDLLSEFGQFLPDANGS
SVVSIDAFNFQSLPAFAAASLKDSTFGVKNDHSSTVKKLGFGTKTQIKNSSHMRRPSSGS
SGLAPPAKKPKTGPLKDVSLTEAGKYGSLKEFAFFDKVRKALKNQEVYENFLRCLVLFNQ
EVVSRAELVQLVQPFLSKYPDLFKWFKDFLGYKEMSGMIEALPQGATGKERISGDLAMEI
DYASCKRYGASYRALPKTYMQPKCSGRTPLCKETLNDTWVSFPSWSEDSTFVTSRKTQFE
EHIYRCEDERFELDVVIETNLSAIRVLEGVQKKMHRMSSEEAAKFKLDNCLGGTSDVLHR
KAIQRIYGDKAPDIIDGLKKNPVVAVPLVLRRLKAKEEEWREAQRGFNKIWREQNEKYYL
KSLDHQGINFKQNDVKSIRSKALLNEIETIFDERQDANGEGTSDVHISYTYKNKSILDDA
AALVIHHMKRQTSIHKDDKQKIKQLLKHFIPDFFFTPRGDLSDDEMDINDDDEETPMNTS
TSPTKSKEPVIVTTPVKIEPVAEEQKKTDDVKSPVINGHANSDAEKEFDENDDRYSLFFV
NNNWYLFFRLHQILCARLQKIYIHASKIAEEEIACKKERREATAIALRLKQPTEVEPEDY
YPFFLEMVKNLLDGNMESNGYEDQLREMFGIHAYIAFTLDKVVQNMVRQLQHIACDDCCI
QSTELFQQQKVLDATGGRLATQHQRAAVENAYQRKAEQLLSDENCFKVMLYKNDCRLTIE
LLDTDTENSEEPVEVERWSEYVEKYIANDETIPGELKDQLSRKPVFLPRNIRQWRQRNKL
DKQIKEGAPVAGPVTADGDGPKPTVKEELQVLDDTECKFNVNSFKMVYVVNSESFLYKRN
ALNKAHVSHPRISMKLHDKFSAWCLAWRDMNVEPDKEKECSDWLEANNEDEERKPSITRR
KDDNDLEKSPYYPYNKYVVEYFAPVPPQAEPAAGTPNPTPTPMETDSQS
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcgccccaatgatcaggagagcaccgagcctgagcggcccgtcagtagcgtc
aatccagcgtcacttgcacgcgtgataccgccccctggtagactccctgaagcgatgcat
tctggactgcagcagtttcctgtacaaggctttcaggtcagccaaccgagccatcatatg
gcccaaccaatccaccaaccggccgcaccccagccacaggtaccagtcccagctcctgta
cccactcctgtcgccgtggctgccgcagcacccgtacagacaccaaatgcaccagtgcac
cagccggtgcagagccaagtgcaccaacaacagactgttcaccaggcgcaagcccatgca
caggtacatagttactacaataggcaacaagaacatcacaattggctagtcgacgagact
tctgctggggctccgaaggctcattcagcccaggtccaaggacaacagcaacaacagttt
caacgtctgaaggtggaggatgcgttgtcttacttagaccaggtgaagctacagtttggc
aatcagccgcaggtctataatgacttcttggatatcatgaaggagttcaagtcgcagtca
attgatactcctggtgtcatcaaccgagtgtccaacctcttcaaaggccacccagacctc
atcgtcggcttcaacaccttcctgccacctgggtacaagattgaagtgaatgcagccaat
gagactatcagtgtgcaccaacctggtcagcaggtgatgtcgatatcccatgctacgggg
tctatcctgccgtcggcccaaccagtcgcaacgattccacaacctcaacagccaccacaa
cactcctcgcctggtcacgtcggagcaactgtcccaagtcatgtgacatcatcgacacat
cacacctaccatcatcaacggcccccggtgcctgatatcccgtcgccacagcgggaccaa
aatcaacaacaggccacccaacctgttgagttcaatcatgccattaactatgtcaacaaa
ataaagaatcggttccaaggccagcctgagatctacaaagcatttcttgaaatactccac
acgtatcagaaggaacagagaagtctcaaggatgcgtgctctcttatgcagggaactgtc
aatacaggttataagcctctcaccgaggcggaggtctattcccaagtggccaaactcttt
caaaatcaagaagatcttctttcggaatttggacaattcctgcctgatgcgaatggttca
tcagttgtgagcatcgatgctttcaacttccaaagtctcccagcattcgctgcagcaagc
ctcaaggactccacgtttggtgttaaaaacgaccattcctcgaccgtgaagaagttaggc
ttcggcaccaagacgcagataaagaacagcagtcacatgcgacggccgtcatctgggagc
agtggcctcgctccgccggcaaagaaaccaaagacagggcctctcaaggatgtttcgttg
acagaggccgggaagtatggaagtttgaaggagtttgctttctttgacaaggtgaggaaa
gccctaaagaatcaagaagtctatgagaatttcctgcgctgcctcgtgttgttcaatcag
gaggttgtatcgagagcagagctggtccaactggtgcagccattcctcagcaaatacccc
gacttgttcaaatggttcaaagacttccttggctacaaagagatgagtggcatgattgag
gccctgccccagggtgcgacaggcaaggaacgcatcagtggagacctggctatggagatt
gactatgcaagctgtaaacgttacggagccagttatcgggcgctacccaagacttacatg
caacccaagtgttcggggcggacgcctttgtgcaaggagacgttgaacgacacatgggta
tccttcccttcctggtcagaagattcaacatttgtcacgtcgaggaagacacagtttgag
gaacacatttacaggtgtgaggacgaacggtttgagcttgatgtcgtcatagaaaccaac
ctgtcagcaatccgtgttttagagggcgtacagaaaaagatgcatcgcatgtccagtgag
gaagctgccaagtttaaactcgataactgccttggtggcacatcagatgtgttacatcgg
aaggcaatccagcggatatacggcgacaaggctccggatatcatcgacggtttgaagaag
aacccggttgtagctgttcctcttgttctcagacgattaaaagcaaaagaagaagaatgg
cgggaagcacagcgtggcttcaacaagatctggcgggaacagaatgaaaaatactatctc
aagtcacttgatcaccagggcatcaacttcaaacagaacgatgtcaagtccatacgctcg
aaggctcttctcaatgagatcgagactatatttgatgagcgccaggatgctaacggtgag
ggtactagtgatgttcatatctcctacacatacaagaacaagtcgattctcgacgacgca
gcagcccttgtcatccatcacatgaaacgtcagacaagtatccacaaagacgacaagcaa
aagatcaaacaactactgaagcatttcattccggacttcttcttcacgccgcggggagat
cttagtgatgacgagatggacattaatgatgatgatgaagagactcctatgaacacaagc
acgagtccaacgaaatcaaaggagccagtcattgtgacgacaccggtgaagatagagcca
gtggcagaggaacagaagaagactgatgacgtgaaatcacccgtcatcaacggccatgcc
aatagtgacgcagagaaagagttcgatgaaaacgacgacagatactcacttttcttcgtc
aacaacaactggtacctgttcttccggttgcaccagatcctgtgcgcccgtctacaaaag
atttacattcacgcatcaaagattgccgaggaagagatagcatgcaagaaggagaggcgc
gaggcgacggctattgccttgcgattaaaacagccaactgaagtcgagccggaggactac
tacccattcttcctcgagatggttaagaatctcttggacggcaacatggaatctaacggt
tatgaggaccagctgcgagagatgtttggtatccatgcctacattgcctttaccctcgat
aaggtcgtccagaacatggtcagacagctccaacacatagcatgtgacgactgttgtata
cagtcgacggaactattccagcaacagaaggtcctggacgcgaccggtgggcgcctggcc
acgcaacatcaacgagctgctgtcgagaatgcatatcaacggaaggcagagcagttgttg
tccgatgagaactgtttcaaagtgatgttgtataagaatgactgccgtctgaccatcgaa
ctcttggacaccgacacggagaactcagaggaaccagtcgaggtcgaacgatggtcagaa
tatgtggaaaaatacatcgccaatgacgagacaatacctggtgagctgaaagaccagctc
tctcggaaacctgtcttcctgccaagaaacatccgccaatggcgacaacggaacaagctt
gacaaacaaatcaaagagggcgctccggtcgctggccccgtgacagcagacggagacgga
cctaaacccactgtcaaggaagagctgcaggtcctcgatgatacggaatgcaagttcaac
gtgaactcattcaagatggtctacgtggtgaacagtgagagcttcctgtacaagaggaat
gcattgaacaaggcacatgtgtctcacccgcgcatctcgatgaaactccacgataaattc
agcgcctggtgcctcgcgtggcgagacatgaatgttgaaccggacaaggagaaggagtgc
agtgattggctggaggcgaataatgaggacgaggaacgtaagccaagcatcacacgccga
aaagacgataacgatttggagaaatcgccgtattatccgtataacaagtacgtcgtggaa
tactttgctccagtgccacctcaagctgagcctgctgccggaaccccaaaccctactccg
actcccatggaaacggactcacaatcgtag
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integrated database retrieval system
