Lineus longissimus (bootlace worm): 135499454
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Entry
135499454 CDS
T09977
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135499454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llon03021
]
135499454
03036 Chromosome and associated proteins [BR:
llon03036
]
135499454
Transcription machinery [BR:
llon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135499454
Coactivators
SAGA/TFTC/STAGA complex
135499454
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135499454
STAGA complex
135499454
TFTC complex
135499454
SAGA complex
135499454
SLIK complex
135499454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
eIF2A
Beta-prop_Vps41
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_VPS8
PROPPIN
VID27
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
135499454
NCBI-ProteinID:
XP_064646268
LinkDB
All DBs
Position
15:complement(15456559..15462332)
Genome browser
AA seq
670 aa
AA seq
DB search
MAAPVKIENDDNLGELKLDEGQDKQTLLAVLGFLKKHNLKGTEQQLLHEAHLPEDLLKEG
QDEQKDTDVSQALAAYKSEGDPTLYDDLYTNLKSFIESTLDSHKIELAMVLYPVFVHMYL
ELVYNEHEEEAKAFFDKFSLEQEQYYQEDIQKLSCVIKKEHMQGHELMDSFRTSKFVIRM
SRESYTHLKRHMMERHQNKLLTFIQEKIYIDVFEGAPRSKQQIDAVSGSMGGEAMREANK
TKVYYGLLKEPDINIPLDDEEEGTEPEGGDKPKKKKPKKDPLMMKKAKNDPNAPNVTRIP
LPELKDADKLDKINQFREAAKRLKLGPDSLPSICFYTFQNSHQGVSAIDFSEDSTLVSAG
FHNSQVRVWTLTKEKLRAMKSPHELNIIDKEADDVLERMMDDRSATESKLLVGHSGPVYT
TNFSPDKNYLLSCSEDSSIRLWSMLTWSNLVVFKGHNFPVWDVKFSPHNHYFASCGHDRT
ARIWSTDHHQPLRIFAGHLSDVECLQWHPNSNYIVTGSSDRSIRLWDVLSGNCVRLLTGH
KGSVQCLSFSPDGRYLASAGIDQTILLWDVANGNQIGQLKGHTDSINSLCFSREGTVLAS
GAMDNTINLWDVNKIFDEQDSEGIVNVLPTATNENQTYLIRSFGTKDTPVLSLHFTRRNL
LLASGPYGDP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgtaaaaatcgaaaatgatgacaatttaggggaattgaaactcgatgag
ggccaagataagcaaaccttgctcgctgtcttggggttcctcaaaaagcacaacttaaaa
ggaacagaacagcaactgctccatgaagctcatctgccagaggaccttttgaaggaaggt
caagatgagcagaaagatactgacgtctcacaggctcttgctgcttacaagagcgagggt
gacccaacactctatgatgatctctacacaaacttaaagagtttcattgaatctacttta
gattcccataagattgaacttgcgatggtcctctaccctgtgttcgtccacatgtacctg
gaactagtctacaacgaacatgaagaagaagccaaggcgttctttgacaaattctctctt
gaacaagaacaatattatcaggaggacattcagaaactatcgtgcgtaattaaaaaggag
catatgcagggccacgagctgatggatagttttcggacgagtaaatttgtgatccgaatg
tcacgagaatcttatactcatctgaagcgtcacatgatggagagacatcaaaataaactg
ctgacgtttattcaggagaagatttatattgatgtgtttgaaggtgcacctcgcagcaaa
cagcagatcgatgcagtgtctggcagtatgggcggtgaggcgatgcgtgaggcaaacaag
actaaagtctactacggtctgctgaaagagccggacatcaacatcccattggacgatgag
gaggaggggaccgaacctgaaggtggcgataaacccaagaagaaaaagcccaagaaggat
ccgttgatgatgaagaaggcaaagaatgatcctaacgctcccaatgtgaccaggatacca
ctgcccgaattgaaagatgcggacaaacttgacaaaatcaaccagtttagagaagcggca
aagcggttgaaactcggacctgatagtctcccttccatctgcttttacacattccagaac
tctcaccaaggagtttctgcaattgacttcagtgaagactcaactctcgtaagcgcaggg
ttccacaattcacaagttcgtgtttggacgctcacgaaagagaaactgcgggcaatgaaa
tctccgcacgaattaaatattatcgacaaggaagcagatgatgtcttggaacggatgatg
gacgacaggagtgcgacagaatcgaaactgttggttggtcacagtgggccggtttatacg
acaaactttagtccggataagaattacctgttgtcatgttcggaggattcttcaattcgc
ttgtggagtatgttgacctggagcaacctagttgtctttaaggggcataactttcctgtc
tgggatgtcaaatttagccctcataatcactattttgcctcctgtggtcacgatcggaca
gcccgcatctggtcgacagatcaccaccaaccgctgcgtatatttgctggccacttgtca
gatgttgagtgtcttcagtggcatccaaactccaattatatagtgacaggctcatcggat
agatcaattagattatgggatgtcctgtctggcaactgtgtccgacttctcactggtcac
aagggctctgtacaatgtttatcattctctcctgatggacggtatcttgcctcagccggc
attgaccagaccatcttattatgggatgttgccaatgggaaccagataggacagctgaag
ggtcacacagattcgataaactcgctgtgttttagcagggaggggacggtgcttgcatca
ggtgccatggacaacacgatcaacttgtgggacgtgaataagatctttgacgaacaagac
agtgaaggcattgtcaatgttttacccactgccacaaatgaaaaccagacatacctaatc
cggtcgttcggaaccaaagacacaccggttttgagtttgcattttacacggaggaatctt
ctgttggcatccggaccgtacggagatccttga
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integrated database retrieval system
