Lineus longissimus (bootlace worm): 135499454
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Entry
135499454 CDS
T09977
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135499454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llon03021
]
135499454
03036 Chromosome and associated proteins [BR:
llon03036
]
135499454
Transcription machinery [BR:
llon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135499454
Coactivators
SAGA/TFTC/STAGA complex
135499454
Chromosome and associated proteins [BR:
llon03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135499454
STAGA complex
135499454
TFTC complex
135499454
SAGA complex
135499454
SLIK complex
135499454
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
CFAP251_N
ANAPC4_WD40
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_SCAP
NBCH_WD40
PAC11
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_RFWD3
Tricorn_2nd
Beta-prop_SPT8
eIF2A
Beta-prop_Vps41
WD_LRWD1
ASA1
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_DCAF12
TRM82_WD
PROPPIN
VID27
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
135499454
NCBI-ProteinID:
XP_064646268
LinkDB
All DBs
Position
15:complement(15456559..15462332)
Genome browser
AA seq
670 aa
AA seq
DB search
MAAPVKIENDDNLGELKLDEGQDKQTLLAVLGFLKKHNLKGTEQQLLHEAHLPEDLLKEG
QDEQKDTDVSQALAAYKSEGDPTLYDDLYTNLKSFIESTLDSHKIELAMVLYPVFVHMYL
ELVYNEHEEEAKAFFDKFSLEQEQYYQEDIQKLSCVIKKEHMQGHELMDSFRTSKFVIRM
SRESYTHLKRHMMERHQNKLLTFIQEKIYIDVFEGAPRSKQQIDAVSGSMGGEAMREANK
TKVYYGLLKEPDINIPLDDEEEGTEPEGGDKPKKKKPKKDPLMMKKAKNDPNAPNVTRIP
LPELKDADKLDKINQFREAAKRLKLGPDSLPSICFYTFQNSHQGVSAIDFSEDSTLVSAG
FHNSQVRVWTLTKEKLRAMKSPHELNIIDKEADDVLERMMDDRSATESKLLVGHSGPVYT
TNFSPDKNYLLSCSEDSSIRLWSMLTWSNLVVFKGHNFPVWDVKFSPHNHYFASCGHDRT
ARIWSTDHHQPLRIFAGHLSDVECLQWHPNSNYIVTGSSDRSIRLWDVLSGNCVRLLTGH
KGSVQCLSFSPDGRYLASAGIDQTILLWDVANGNQIGQLKGHTDSINSLCFSREGTVLAS
GAMDNTINLWDVNKIFDEQDSEGIVNVLPTATNENQTYLIRSFGTKDTPVLSLHFTRRNL
LLASGPYGDP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgtaaaaatcgaaaatgatgacaatttaggggaattgaaactcgatgag
ggccaagataagcaaaccttgctcgctgtcttggggttcctcaaaaagcacaacttaaaa
ggaacagaacagcaactgctccatgaagctcatctgccagaggaccttttgaaggaaggt
caagatgagcagaaagatactgacgtctcacaggctcttgctgcttacaagagcgagggt
gacccaacactctatgatgatctctacacaaacttaaagagtttcattgaatctacttta
gattcccataagattgaacttgcgatggtcctctaccctgtgttcgtccacatgtacctg
gaactagtctacaacgaacatgaagaagaagccaaggcgttctttgacaaattctctctt
gaacaagaacaatattatcaggaggacattcagaaactatcgtgcgtaattaaaaaggag
catatgcagggccacgagctgatggatagttttcggacgagtaaatttgtgatccgaatg
tcacgagaatcttatactcatctgaagcgtcacatgatggagagacatcaaaataaactg
ctgacgtttattcaggagaagatttatattgatgtgtttgaaggtgcacctcgcagcaaa
cagcagatcgatgcagtgtctggcagtatgggcggtgaggcgatgcgtgaggcaaacaag
actaaagtctactacggtctgctgaaagagccggacatcaacatcccattggacgatgag
gaggaggggaccgaacctgaaggtggcgataaacccaagaagaaaaagcccaagaaggat
ccgttgatgatgaagaaggcaaagaatgatcctaacgctcccaatgtgaccaggatacca
ctgcccgaattgaaagatgcggacaaacttgacaaaatcaaccagtttagagaagcggca
aagcggttgaaactcggacctgatagtctcccttccatctgcttttacacattccagaac
tctcaccaaggagtttctgcaattgacttcagtgaagactcaactctcgtaagcgcaggg
ttccacaattcacaagttcgtgtttggacgctcacgaaagagaaactgcgggcaatgaaa
tctccgcacgaattaaatattatcgacaaggaagcagatgatgtcttggaacggatgatg
gacgacaggagtgcgacagaatcgaaactgttggttggtcacagtgggccggtttatacg
acaaactttagtccggataagaattacctgttgtcatgttcggaggattcttcaattcgc
ttgtggagtatgttgacctggagcaacctagttgtctttaaggggcataactttcctgtc
tgggatgtcaaatttagccctcataatcactattttgcctcctgtggtcacgatcggaca
gcccgcatctggtcgacagatcaccaccaaccgctgcgtatatttgctggccacttgtca
gatgttgagtgtcttcagtggcatccaaactccaattatatagtgacaggctcatcggat
agatcaattagattatgggatgtcctgtctggcaactgtgtccgacttctcactggtcac
aagggctctgtacaatgtttatcattctctcctgatggacggtatcttgcctcagccggc
attgaccagaccatcttattatgggatgttgccaatgggaaccagataggacagctgaag
ggtcacacagattcgataaactcgctgtgttttagcagggaggggacggtgcttgcatca
ggtgccatggacaacacgatcaacttgtgggacgtgaataagatctttgacgaacaagac
agtgaaggcattgtcaatgttttacccactgccacaaatgaaaaccagacatacctaatc
cggtcgttcggaaccaaagacacaccggttttgagtttgcattttacacggaggaatctt
ctgttggcatccggaccgtacggagatccttga
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integrated database retrieval system
