Lineus longissimus (bootlace worm): 135499616
Help
Entry
135499616 CDS
T09977
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135499616
09123 Folding, sorting and degradation
03018 RNA degradation
135499616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135499616
03041 Spliceosome [BR:
llon03041
]
135499616
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135499616
mRNA degradation factors
5'-3' decay
Lsm complex
135499616
Spliceosome [BR:
llon03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135499616
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
135499616
NCBI-ProteinID:
XP_064646561
LinkDB
All DBs
Position
15:complement(14075263..14077545)
Genome browser
AA seq
89 aa
AA seq
DB search
MTSMQSPSQLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMVIEDVTEFENTPD
GRRVTKLDQILLNGNNITMLVPGGEGPEQ
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgacttccatgcagagcccgtcacaacttttaccacttgaattggtggataaatgtatt
ggatcaagaattcacatcataatgaaaaatgacaaagaaattgttggaacgttattaggt
tttgatgactttgtcaatatggtgatagaagatgtcacagaatttgaaaatacgccagat
ggaaggcgagtaaccaaactagatcaaattttattgaatggaaataatatcacaatgctg
gtgcctgggggcgaaggaccagagcagtag
DBGET
integrated database retrieval system
