Lineus longissimus (bootlace worm): 135499639
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Entry
135499639 CDS
T09977
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135499639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llon04131
]
135499639
Membrane trafficking [BR:
llon04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135499639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
zf_RING_Vps8_fungal
TPR_Vps41
Clathrin
zf-RING_Vps41
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_EML_2
WDR55
WD40_Prp19
zf-RING_5
Beta-prop_WDR3_1st
zf-RING_11
Beta-prop_THOC3
Beta-prop_EML
zf-RING_UBOX
DUF3490
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
zf-RING_2
zf-rbx1
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
135499639
NCBI-ProteinID:
XP_064646588
LinkDB
All DBs
Position
15:13283099..13307127
Genome browser
AA seq
1413 aa
AA seq
DB search
MADGAENAQVAADKMELNLEELDADEFDLPAIESAPTLESILNEPDDGSVFGDDDLVLPP
MFPGDLDQGDTSSMSSQEGILDTPKSRGRKKQRKSIRYEEHGSIMRHVVLKGISAQLMSA
ADRVDAGMPTAMAVSELIAIGTSHGLVLVFDPKQVLKWCLGSTAVGAQYGSVSALSFNRD
CTRLLCGFAKGQITMWDLTNGKLIRTISDAHPPGTAILHVKFTDDLTIAVCNDSGGSVFE
LEMKRLIGVRTCESRCLFSGSRGEVCTIEPLHMNHTIKDHPMKDVLVLAMGTLSKVLVVT
IRPKLKVIFSHALKGDPATLPLLAWQFVIIQVSAKDRVIDPVLAFARDQTIYYYQAICTA
ADDIRFCSLQKMETPYKLLAIQWINPRTLIALDTSEKIHILDVKSEEELEVIDVGEVQLS
YGTSHFKSLATGGNVSKALAFAGECACYQSIICHNGQLLLMGTKSIHVLTMRNWEERIEN
LVKQNNYQDALTMAQSFYEGKAKAVIGLLGGQQKRKKIVAAKMLDLLQNYVDISMTKNLP
ERGKMEELEEYYQNVVPICVDYCLTLGRTDVLFGEIYVRFSMDQIAKSTFLECLEPYIIT
DRLTSVTPSVMKDFIDNYEAKGMLQNVEACIVHLDVSSLDIHQVVVLCWGHGLYDAIIYV
YNKGMQDYTTPLEELLRILRMALSVGKQLSDDQIRLGNKLLVYISCCLAGRAYPLGDIPA
PIVNKVKADVFKSVTCLHTKEANTDEPVYPHLRTLLQFDTREFLNVLALAFEEAEFNTDE
GIQKRQRVVDILLQVMVESIGFSPTQVGILFTFLARQMARHENTILVNRVLFEQVLEFLS
SPGDESRHEERQQALLELLNAGGFEQFDETRLLTLAENAKFYRVCELLYEKRREFDKILS
CYWRDPSRKYQAFAYIESIIVNPLYTEEEKDNVRKEALLHLEELILIDSKKTAQLVLIGF
SRDLVDIVKKLENNTQVTYEFLKGVFEYRETTGSAIYTDRQITIEPQIHEKYIELMCQFH
PSNVYNYIKGADGYRLPETLLISKRHRVPDATAFLLEKSGDIQGAFAIILESVKDKILEL
EGVLIAKKDTQDVDEVNALKNTIAIALCNIQTVLIVIIQLCQRNSKKLEEDEREALWFPL
LEVMMSSQRRLKDQVHKELWDDFKQLTRHVLNSMMGYIALPAILQKIMQDPTYSTGKFGE
IRELILGMLETYNYEKTLLHTCNSLLNHDLHLQLAGLHSAANHGIIPRGDACNTCYKQYN
TLANNESIVVFRCGHGYHTQCLYGTDSYHIIDGEEVWVCFLCTSTKRGHTSQAPHLLRSL
SNPGQSAVRVSIKDRGARSKESPIKMSEEQMMGIDALRRNQKTASRLAILTELARPDTRP
KYRQQTYSATTSGSILQNENFQLRLAPPPLDIS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggcggaaaatgcccaggttgctgctgataaaatggaattaaacttagaa
gagcttgatgcagacgaatttgatcttcccgctatagaatcagcgccaacattggagagt
attctaaatgagcctgacgatggatctgtgtttggtgatgatgacctcgtgctgccccct
atgttcccgggtgacctggaccagggcgatacctcatcgatgtcgagccaggagggcatt
cttgatactccaaagtcaaggggccgtaaaaaacagaggaagagcattcgctatgaagaa
catggttcaatcatgcgtcatgttgtcctgaaggggatctctgcccagctcatgtctgct
gcggatcgtgtggatgctgggatgcccacagcaatggctgtttctgagctcattgccatt
ggaacttctcatggattggtgttggtgtttgacccaaagcaagtcttgaaatggtgttta
ggaagcactgctgtcggagcccagtacgggtctgtctctgctctcagcttcaacagggat
tgtacaaggctactgtgtgggttcgctaagggtcagatcactatgtgggatctgacgaat
ggaaagttgatcaggacgatcagtgatgctcatcccccagggactgccattcttcatgtc
aagtttactgatgacttgacgattgctgtgtgtaacgacagtggcggatctgtattcgag
ctggaaatgaagcgtctgatcggagtgcgaacctgcgagtcaagatgtcttttttctgga
agccgaggtgaagtttgtacgatcgagccccttcatatgaatcacacgatcaaggaccac
cccatgaaagatgtgttagtgcttgccatgggcacactgtcaaaggttctcgtggtcacc
atcagacccaaactcaaagtcatctttagccatgcactcaagggtgatccagctactttg
cctctccttgcatggcagttcgtcatcattcaggtgtcagctaaagatcgagtcatagac
ccagtcttggccttcgcccgtgatcagacaatctactattaccaggccatttgtactgca
gcagacgacattcgtttctgctctctccaaaaaatggagacaccctacaaactccttgcg
attcaatggatcaaccctcgtacgctgattgcgctcgatacatccgagaagattcatatt
ctagatgtcaaatctgaagaagaattagaggtgattgatgttggagaggttcaactgagt
tatggaactagtcacttcaaatctttggcgacgggtggtaacgtaagcaaggctttggca
tttgctggtgaatgtgcctgttaccagtccatcatctgtcataacggacaactcctcctg
atgggcaccaagtccatccatgtgcttacaatgagaaattgggaagagagaattgagaat
ctcgtgaagcagaacaactaccaggatgcgctgactatggctcagtcattctacgagggc
aaagcaaaggctgtgatcggcctcctcggtggtcagcaaaagcgaaaaaaaattgtggca
gcaaagatgcttgacctgcttcagaattatgtcgacatctccatgacgaagaatcttcct
gagcgagggaagatggaggaactggaagaatattaccagaacgttgtgccgatttgtgtt
gattattgtctgactctgggtagaactgatgtcctcttcggtgaaatctacgtccgtttt
agcatggaccaaattgccaaatccaccttccttgaatgtctggaaccatatatcattact
gatcgcctcacgtcagtaacgccctctgttatgaaagacttcatcgataattacgaggcc
aagggaatgttacaaaatgttgaagcgtgtattgtgcatctggacgtatctagtctagat
attcaccaggttgtagtcttgtgctggggccacggcctctacgatgccatcatctatgtc
tataacaagggcatgcaggactacaccaccccattggaggagctcctgaggatcttgaga
atggctctcagcgttggcaagcaactcagtgatgaccagattcgccttggtaacaaactc
ctggtctacatcagctgctgcctggcaggccgggcgtacccccttggagacattcctgca
cccattgtaaacaaagtgaaagcagacgtcttcaaatctgtcacatgtttgcatacaaaa
gaggcgaatactgacgagccggtctacccgcacttgagaacacttctccagttcgacacg
cgagagtttctgaacgtcctcgctttggcattcgaagaagcagaattcaacactgacgaa
ggcatccagaaacgtcaaagagttgtcgatattttattacaagtcatggtggagagtatt
ggattttctccgacccaagtagggatcctgttcaccttcctagcccgtcagatggcccgc
catgagaataccattcttgtcaacagagttctctttgagcaggttcttgagttcctctca
agcccgggggacgagtcacgtcatgaagagagacaacaggctctacttgaactattgaat
gccggcggctttgagcagtttgatgagactcgtctgctcaccctggcagagaatgcaaaa
ttctaccgtgtatgtgagctcctctatgaaaaaagaagagaatttgacaagattctgtca
tgctattggagggatccttctagaaagtatcaagcctttgcgtatatcgaatcaatcatc
gtgaatcctctctacactgaggaagagaaagacaatgtacgcaaggaagctctcttgcat
ttggaggagctaattctgattgacagcaagaagacggcccagttggttctgattggcttc
agccgagatttggtggacattgtgaagaaactggagaataatactcaagtgacgtatgaa
ttcctgaagggagtattcgagtacagggagacaacaggcagtgccatctatacagaccgc
caaataacgatagaaccgcagattcatgaaaaatatatcgagctaatgtgccagtttcat
ccgagtaatgtctacaactacatcaagggggcagatggttacagactcccggaaacgctc
cttatctccaagagacacagggtgccagacgcaactgccttcctcttggaaaaatcggga
gacatccagggggcatttgccatcatcttagagagtgtaaaagataaaatactggagttg
gagggagtgttgattgcaaagaaagacacacaggatgttgatgaagtaaatgcattgaaa
aacaccatcgcgattgccctttgcaacatccagactgtcctgatcgtcatcattcaactc
tgccagcgcaactccaagaaactcgaagaagatgagcgggaggcgttgtggttcccgctg
ctcgaggtcatgatgtcatcacagcgtcgtcttaaggatcaggtccacaaggaattgtgg
gatgattttaaacaactgacccgccatgttctgaacagcatgatgggatacatcgcactg
cccgccattcttcagaaaatcatgcaggacccgacatacagcacgggaaagtttggtgaa
attcgagaactcattctcggcatgctcgaaacttataattatgaaaagacgctgcttcac
acgtgcaacagcctacttaatcatgaccttcaccttcaactcgctggcctccacagcgcc
gcaaaccatggcatcattccacgtggcgatgcctgtaatacctgctacaaacagtacaat
acattggcaaacaatgaaagcattgttgtgttcagatgtggacacggctatcacacccag
tgtctctatggcacagattcctatcacatcatcgacggcgaagaggtctgggtgtgtttc
ctgtgcactagcaccaaaagagggcacaccagtcaggcaccacatctcctacgctcgctg
tctaatccaggtcagagtgcggtgcgagtgagcatcaaggatcggggcgccagatcgaag
gaatcgccaattaaaatgagtgaagaacaaatgatggggattgatgcgctccgcaggaac
cagaaaacggcttcgaggcttgccattctaaccgagcttgccaggccagacacgcgccca
aaatacagacaacagacatactcggcaacgacatctggcagcattctacagaatgagaac
ttccagttgcggcttgcaccacctcctttggacatatcttga
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integrated database retrieval system
