Lineus longissimus (bootlace worm): 135499857
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Entry
135499857 CDS
T09977
Name
(RefSeq) enhancer of mRNA-decapping protein 3-like
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135499857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135499857
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135499857
mRNA degradation factors
5'-3' decay
Decapping complex
135499857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YjeF_N
FDF
LSM14
DUF5096
P_C
Motif
Other DBs
NCBI-GeneID:
135499857
NCBI-ProteinID:
XP_064646915
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Position
2:162351..167368
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AA seq
471 aa
AA seq
DB search
MSTSWIGSTISIDCGPILGTYQGQVSAVAGDKQTISIIKGCRNGIPSAVPEITIRGSDIK
DLKILQTCEELEATKAREPRRSGNSGSSSATLTIPPRKNQHNGSSDSGGGSYNPKDETFR
KRTYSGSEYRQSQKNVTPKKNDRRQNNRTPREDTFSAPVDGFMEEFDFEKNLALFDKQAV
FEEIENSQKPDVVRTAQSQTQRPAKYRHDENVIPSGPVCYRQIDVKSEFRGPREYVTDLG
LVVPSITKMLKSKIFTSAERFGFTAQRLTETIGRSAAEMALQLSGGKNRLNPKNDHQRPR
VVVLAGSHAQGAQGINCARHLSNHSVEVVVFLPTDGPILHCVLEELHLFEMTRGKKVGKV
QDLPSHPQEIIINALDQEESEETRRQPWYPSLVDWCNQSKANVLAIDPPESGSSIDTKWS
LSPALPLNLAQNCGNIYLCDVGFPKKIFEDNGVKYNSPYGGKFIIPLHLNK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgagttggataggtagcaccatatccatagactgcggcccaatcttgggcaca
taccagggccaggtgtcagcagtggcaggtgataaacagaccatatcaatcatcaaaggc
tgtcgtaatggcataccaagtgccgtaccagagatcacaatcagaggttctgatatcaag
gatctgaagattctgcagacatgtgaggagctggaggcgacaaaagcacgtgagccacga
cggagtgggaattctgggagttcctcagcgacgctgaccattccccccaggaagaaccag
cataatggctcgagtgactcaggcggtggcagttataaccctaaggatgagactttcagg
aagaggacatactcaggctccgaatatcggcagtcacagaaaaatgtcacgccaaagaaa
aatgatcgccgacagaacaatcgtacaccccgcgaggatacgtttagtgctccagtggat
ggcttcatggaagaatttgactttgagaaaaacttggcattattcgacaaacaggctgtt
tttgaagagattgagaactcacaaaagccagatgtggtgcgtacagctcagagtcagaca
caaaggccggccaagtaccgccatgatgagaatgtgattccatcgggaccagtgtgttat
cgacagattgacgtcaagtctgaattcagggggccgagagagtatgtgacggatctgggt
ttggttgtgccaagtattacgaagatgctcaaaagtaagatctttacatcggcggagagg
tttggcttcacggctcagagactgacagagacaattggcagatctgctgcagagatggcg
ttacaactcagtggtggaaaaaacagactcaatccaaagaatgaccaccagcgcccccga
gtggttgtactagcaggttctcacgcccagggagctcaaggtatcaactgtgctcgtcat
ctgagtaaccactcagtggaggtggtcgtcttcctgcccacagatggaccaatacttcac
tgcgttcttgaggagctgcatttatttgaaatgacccgaggaaagaaagttgggaaagta
caagatctgcctagtcatccacaggagattataatcaatgctctggaccaagaggagagt
gaagagacacgccgacagccatggtatcctagcctggtggattggtgtaaccagagcaaa
gctaacgtgctggcgattgaccccccggagtctggcagcagcattgacaccaagtggtcc
ctgtctccagcgctgccactcaatcttgctcaaaactgtggcaacatttacctgtgcgat
gttggattcccaaaaaagattttcgaagacaacggtgtgaaatataactctccctacggt
gggaaatttatcattccgctgcatttaaacaagtaa
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