Lineus longissimus (bootlace worm): 135500261
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Entry
135500261 CDS
T09977
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135500261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llon03041
]
135500261
Spliceosome [BR:
llon03041
]
Complex A
U1 snRNP components
U1 related factors
135500261
Complex B
135500261
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
DUF2188
SabA_adhesion
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
135500261
NCBI-ProteinID:
XP_064647673
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Position
16:1488490..1497629
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AA seq
878 aa
AA seq
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MSGNGPPPPLMGQHFPMQQGGNPPGGWPPMGGPGVPPSGPPGGQQNAPPMGFGQFPGNMN
IPMPGNQPPNNANYHNQGNAPPSMPPQAPPMTQNPQVAVAKQSSTPSNSPKQDQGGRTTK
GSDWTEHKAPDGRTYFYNRVTKKSSWEKPDELKSPAEQLDPAARERQVLLSKCPWKEHKS
DGNKIYYHNSQTKESRWTKPKELEDIENMIANLQKGAAKAAQVASAQAAIAPATMPSLPP
TPAPMLPTSAPPSGKPAPSAIEAAMEATLASIELPPLPQKSAPLPAPDTAMEDVSSESSE
ESGPVTRKEFTFRTKKEAIEAFKTLLRDKEVPSNASWEQAIKTISSDPRFVALKHLNEKK
QAFNAYKTQRAKEEKEEQRLRAKQAKEELEKFLLSTDRMNSQIRYRKAEIVFADDDVWTC
VADRDRRDIYDDVIHVLAKREKEEAKDLRKRNIKVFNEILDSMPTLTFRTTWSEAQHMLL
DNPIFAEDLDLQNMDKEDALVCFEEHIRMLEQEYDDEKETGRRRIKRNQRKNREGFLVLL
EELHENGKLNSMSLWMDLYAIVSQDMRFHNMLGQPGSTPLDLFKFYVEDLKARFHDEKKL
VKEILKDNGFIVELSTSYEDFASTLAEDKRATALDSGNVKLTFNSLLEKAEAREKERLKE
EARKQKKLEMIYKTLLKQADPPIDLATKWEDIKQRFEGVHAFDAITLESEKIRLYKEYIT
CMEEACSHHHSRKKRSKKHKTKRSPSSEESEESEYQRSGYSRSKKKMPSKSKSRSPSPNS
LPSDYAERELEMHAIKKHKKKSKKRKKRPSRSPSHESGSEAEVIDKRKPRHSTSPEFRKP
DKQHYAAAAAANDSGSDLSEEELEKQRRRLLKELEAHL
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaatggaccacctccgcccttaatgggccagcactttccgatgcagcaaggt
gggaatcctcctggtggttggcctccgatgggagggcccggtgtgcccccatctggtccc
cctggaggacaacagaatgcaccacctatgggttttggtcagtttcctggaaacatgaac
attcctatgcctggtaaccaaccgccaaataatgccaactatcataatcaaggcaatgct
ccaccatctatgccacctcaagcaccaccaatgacacagaatcctcaagtggccgtcgct
aaacagtcgtccacgccatcaaattccccaaaacaggaccagggtggcagaacgactaag
ggatctgattggacggaacacaaggctccagatggccggacatatttctacaatcgcgtt
acaaagaagtcatcgtgggagaaaccagatgaactcaaatcccccgccgagcagttggat
cctgctgcacgcgaacgacaggttcttctgtctaaatgcccatggaaagaacacaagtct
gacgggaacaaaatctactaccacaactcacaaacaaaggagtcgcgttggacaaaacct
aaagaattggaggatattgagaacatgatcgccaatcttcaaaaaggtgccgcaaaagct
gcccaagttgcaagtgcacaggctgcgattgcacccgccaccatgccaagcctccctccg
actccagcaccgatgttaccaacatcagcacccccttcaggcaaacctgcaccatcggct
atagaagctgccatggaggcgacactggcatctattgagctgccgccgttacctcagaag
tctgccccgctcccggccccagacacagccatggaggatgtgtccagtgagagctcggag
gagagtggtccagtcactaggaaggagtttacattcaggacaaagaaagaagcaattgaa
gcttttaagactttgctgagagataaggaagttccatccaatgcatcatgggagcaagca
atcaagacgatatcatccgacccacgctttgtggcgctgaaacatctgaatgagaaaaaa
caagcattcaacgcgtacaagacacagcgtgccaaggaggagaaggaggaacaacgtctc
cgggcgaaacaagccaaggaggagctggagaagttcctactgagtaccgacaggatgaac
tcacagataagatacaggaaagctgaaatagtgtttgctgatgatgacgtttggacttgt
gtagctgatcgggatcggcgagacatctatgatgatgttatccatgtgctagctaagaga
gaaaaggaagaggcgaaggatttacgcaagcgaaatatcaaggtcttcaacgagatcctg
gatagtatgcccacactgacattcaggacaacatggtcagaagctcagcacatgctgtta
gacaatcccatatttgctgaggacttggacttgcaaaacatggacaaagaagacgcgctg
gtctgtttcgaggagcacatccgtatgttggagcaggagtatgatgatgagaaggagacg
ggacgtagacgaatcaaacgcaatcagaggaagaatagagagggatttttggtgctactg
gaagaactccatgagaatggtaaactgaactccatgtctttgtggatggatctctatgcc
attgtgagtcaggatatgaggtttcacaacatgctaggacaaccagggtcgactccactg
gatctgttcaagttctatgtggaggatctcaaagctcgtttccacgacgagaagaaactc
gtcaaggagatattgaaggataacggcttcatcgtggaactgtcaacaagttatgaagac
tttgcctcaacattggccgaggacaagagagccacagcgttagattcgggaaatgtgaaa
cttaccttcaatagtttattagagaaagctgaggccagagaaaaggagagactgaaagag
gaggccagaaagcaaaagaaacttgagatgatttacaaaacgctgctcaaacaagctgat
ccacccattgacctcgctaccaagtgggaggatatcaagcagcgatttgagggagtccac
gccttcgatgccatcacattagaatctgaaaaaatccgtctttacaaagagtacatcacg
tgcatggaagaggcgtgcagccatcatcattcacggaagaaacgctcgaagaaacataaa
acgaaacgatcgccatcgtcagaggagtcagaagagtcagaatatcaacgttctggttac
agcaggtctaaaaagaagatgccatccaaatccaaatcacgctcaccgtcgccaaattca
ctgccgtcagactatgctgagagggagctggagatgcatgccatcaagaaacacaagaag
aagtctaagaagaggaagaagaggccttccagatcgccgtcgcatgagagcgggtcagag
gccgaggtcatcgataagaggaagccacggcatagcacctcgccagagtttcggaaacca
gacaagcaacattatgcagcggcagcagcagccaatgattcagggagtgatttaagtgag
gaagagttagagaagcagcggaggaggttactgaaagagctcgaggcacatctgtga
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