Lineus longissimus (bootlace worm): 135500554
Help
Entry
135500554 CDS
T09977
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135500554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llon03021
]
135500554
Enzymes [BR:
llon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135500554
Transcription machinery [BR:
llon03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135500554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
135500554
NCBI-ProteinID:
XP_064648156
LinkDB
All DBs
Position
16:complement(1754384..1764974)
Genome browser
AA seq
1153 aa
AA seq
DB search
MGVTEKQPEFTNLWSPDYGRPPKVQHQPLQDLTKPHIDSFNYMIREGLAKSVRCMQPLSF
KLKNGDIAEFSVVDVNIFAPEVPSGNYKVSDTKVYPAECRQRGTSYKGRIQVKLLWKMNG
EPKETFDKMLGEVPVMVKSDVCHLSKMSPKELVAHGEEVQEMGGYFIINGIEKIIRMLIM
PRRNYPLAIVRPSWAGKGQLFTSYGVTMRCVRTDQRSANIVLHYLDDGSTTVCFTHSKEQ
FFVPVIMILKILVMDKPDKFIYGELIKGKESDSYYKGCIQNMFQKIQGEGLGTPRHILEY
LGERFRMKLQLPEFYSDFEVGKFLKDQCICIHLDNDMDKFDCLILMTRKLYTFAKGECSA
ESADNPMFQEILLGGHLYQMVLAEKIENWLLSLKYAIEKVENKGGGSRGTDFTLNHSSVM
RCVSLSSQSAITNGMEYLLATGNLISKSGLGLMQATGLTVVADKLNFFRYVSHFRCVHRG
AFFAQMRTTAVRKLLPEAWGFLCPVHTPDGTPCGLLNHMSASCQTVTEVQPFFHASKILG
GLGMTPCDCPPPGPYIECYPVMLDGKVIGWIHKTQAQDAVNQLRYMKVMGIKKVPDRLEI
GLVPMTDAAVAGQYPGLFLFTTVARMVRPVLNLRCKKTEMIGSFEQVFMDICITPNEAYE
GITTHQELSEDVMLSTIACLTPYSDFNQSPRNMYQCQMAKQTMGTPCHTLTHRSDNKLYR
ILTPQTPMVRPYKHDHYQMDEYPLGTNAVVAVLSYTGYDMEDAMIINKGSYDRGFAHGCV
YKSEFVDLGKLSGERSRITLMFGNKEEEKHTGKLDADGFPPIGTYLQQGDPYYSYINVQT
GIQRVSDYKSMEPGYLQSIKICGNDSGTSELQKVCITLRIVRNPIIGDKFSSRHGQKGVC
SKRWPVEDMPFTEGGMTPDILFNPHGYPSRMTIGMMIESMAGKSAAMHGLCHDATPFTFS
EDRPAIDYFGRMLTSAGYNYYGTERLFSGIDGREMEADIFIGVVYYQRLRHMVSDKFQVR
TTGPLDQVTHQPVKGRKRAGGVRFGEMERDGLISHGASFLLQDRLLNCSDRAKANVCTKC
GCILSPYVEKQAPALAAISSQVSRRLVCALCNQSDTIESLNIPYIFQYLCAELAAMNIHA
KLDVTSQQESRKE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgggggttacagaaaagcagccagagtttaccaatctatggtctccggattatgggagg
ccgccaaaggttcaacatcagcccttacaagatctgacgaagccacacattgattccttc
aattacatgataagagaaggtcttgccaagtctgtacggtgtatgcagcctctatctttc
aaactgaaaaatggcgatattgcagaattttctgttgttgatgtaaacatatttgcgcca
gaggtgccgtcgggaaattacaaggtcagcgataccaaggtctacccagccgagtgtcgc
cagaggggtacgtcgtataaaggaagaattcaagtgaagctgctgtggaagatgaacgga
gaaccaaaagaaacatttgataaaatgctcggggaggtaccggtaatggtcaagtctgat
gtgtgtcacctatctaagatgagtcccaaagaactggttgcccatggcgaagaggtgcag
gaaatgggtggctacttcatcatcaacggcattgagaagatcatccgtatgcttatcatg
ccgaggaggaattatcctttggccattgttcgaccatcttgggcagggaaaggccaattg
tttacgagttatggtgtcacgatgagatgtgtccgcaccgaccaaagatcagcaaatatt
gtcttgcactacctcgatgatggatctaccactgtttgcttcactcattcaaaggaacag
ttctttgtgccagtcatcatgattctcaagatccttgtaatggacaaaccagacaagttc
atttacggggagctgatcaagggaaaggaaagcgactcatattacaaggggtgcatccag
aacatgttccagaagatccagggcgagggcctcgggacgccacgacacatcttggaatac
ttgggtgaacgcttcaggatgaaattgcagctaccagagttttattcagatttcgaagtg
ggcaagttcttgaaagaccagtgtatttgtatccatcttgacaatgacatggacaagttt
gactgtttaatcctaatgacgcgaaagctgtatacgtttgccaagggggagtgttcagct
gagagtgccgacaacccaatgttccaagagatcctgctgggaggtcatctctaccaaatg
gtgctcgctgagaagattgagaattggttgctgtccctgaaatacgccattgagaaggtt
gaaaataaaggtggtggttcccggggtacagacttcacgctaaatcactcatcggtgatg
cgttgtgtctcactgagtagtcagagtgctattacaaatggtatggagtacctccttgcc
actggcaacctcatctcaaagagtggcctcggactaatgcaggctactgggctgacggtc
gtcgcagacaagttgaatttcttccgttacgtctcacattttcgttgtgttcatcgtggt
gctttctttgctcaaatgaggacgactgccgtccggaaactgctgccagaagcttggggc
ttcctgtgtcctgtgcacacccctgatggtacaccctgtggtcttctcaatcacatgtca
gcttcttgtcagaccgttacagaagtacagccattcttccacgcatccaagatcctcgga
ggtcttggcatgaccccctgtgactgtccacccccaggcccgtacattgagtgttatcct
gtgatgctggacgggaaggtcatcgggtggatccataaaacgcaagcacaggatgctgtc
aatcagttacgttatatgaaggtcatgggcataaagaaggtgccggatcgccttgagatt
ggcctcgtcccgatgacagatgctgccgtcgcaggtcagtatcctgggctcttcctcttc
acgacagtcgctaggatggttcggccggttcttaacctgaggtgcaagaagaccgagatg
attgggtcgtttgaacaagtcttcatggatatatgtatcacgccaaacgaggcctatgaa
gggatcacgactcatcaagagttgtcggaggacgtcatgttgagtactatagcctgcctg
acgccgtattctgatttcaaccagagtcccaggaacatgtatcagtgtcagatggctaaa
cagacgatgggaacgccgtgccacacgttgacccatcggtcagataacaagctgtatcgc
atcctcactcctcagacgccgatggtacggccatacaagcatgatcattaccagatggat
gagtaccctctgggaacgaatgctgttgtggcagtgttatcatacactggctatgatatg
gaggatgccatgatcatcaataaaggatcatatgacaggggtttcgctcacggatgtgtc
tacaaatccgagtttgtagatctgggaaagctgagcggtgaaaggagcagaattacgctt
atgtttggtaataaggaggaggaaaaacatacaggcaaactagatgctgatggcttccca
ccgataggtacatacctacagcagggggatccctactacagctacatcaatgtccaaaca
ggcatccagagagtgtcagactacaagtctatggaacctggctatctccaaagtattaag
atctgtggtaacgactctggaaccagtgaactccaaaaagtctgcatcacactcagaatc
gttcgcaaccccatcataggagacaagttctccagtcgtcacggacagaagggtgtgtgc
agtaaacgatggccggttgaggatatgccgttcacggaaggtggcatgacgccggatatt
ctgttcaaccctcacggatacccgtctcgtatgacaataggtatgatgatagagagtatg
gcaggcaaatcggccgcgatgcacggtctgtgccatgatgctactccgttcaccttctct
gaggaccgtccagcaatagattactttggtagaatgctcacatcagctggatacaactac
tatggcaccgagcgtttgttcagcggtatagacggccgcgagatggaggcagatatcttc
atcggtgttgtctactaccaaagactccggcacatggtttccgacaagttccaggtacga
acaacaggacctcttgaccaagtcacccaccaaccagtgaaaggtcgaaagcgtgctggt
ggtgtacgctttggagagatggaacgggatggcctgatttctcatggggcatcattcctt
ctgcaggatcgtctgcttaactgttcagatagagcaaaggcgaacgtgtgtaccaagtgt
ggctgtatcctctccccgtacgtggagaaacaagcgcctgccctggctgccatatcatca
caggtctcacgccgtctagtctgcgcgttatgcaatcaatcagacacgatcgaatccttg
aacattccatacatcttccagtatctctgtgcggagcttgctgctatgaacattcacgct
aaactggacgtcacatctcaacaggaatcgagaaaggaatga
DBGET
integrated database retrieval system
