KEGG   Lineus longissimus (bootlace worm): 135500899
Entry
135500899         CDS       T09977                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
llon  Lineus longissimus (bootlace worm)
Pathway
llon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:llon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135500899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:llon03041]
    135500899
   03036 Chromosome and associated proteins [BR:llon03036]
    135500899
Spliceosome [BR:llon03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    135500899
 Complex B
    135500899
 Complex C
   U2 SnRNP specific factors
    135500899
Chromosome and associated proteins [BR:llon03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    135500899
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG CEP104-like_TOG UNC45-central DUF2298
Other DBs
NCBI-GeneID: 135500899
NCBI-ProteinID: XP_064648688
LinkDB
Position
16:678889..689082
AA seq 1353 aa
MREDVGRTNKMAATTHEEIEQQVQAIQAKKANLTGRDESEKVGLGMEGHFDTDIYSGKQS
KFAGYVTSIAPNEDQFDDDEVHDIHQYGKKTHHTAPLNLLNDLTQAEKEYDPLAERRIPR
IADREDEYRAMRRRMIISPARMDPFAEGGKTPDPRNQDRTFVDIMMDRALDDKQKAYRQQ
MAEKAKSGDLKVINGSKEAEAKPSKRRRWDQAADDTPTEKKKKSSSSSSSWDAAEAGTPS
QNRWDETPGRAKGSETPGATPGASTRMWETTPGHATPGAVTPGRGDTPGHATPGHQGTPS
ARRNRWDETPKTERETPGHGSGWAETPRTDRVGGGDLIESTPTPSASKRRSRWDETPVAS
SGGNATPGSMTPGGMTPGGLTPGGLTPGGLTPGGMTPTGLTPSGTTPAGAKAMGMATPTP
GHLMSMTPEQMQAYTWQREIDERNRPLSDEELDQMFPPGYKVLQPPQGYVPIRTPARRLT
ATPTPMAGTPVGFRMQTPDNKVQIVDMQPKGNLPMMKPDDMQYFDKLLVDVDEESLSPEE
QKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHL
LVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMIS
TMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQI
AILMGCAILPHLKNLVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPL
WRGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILVREFQSPDEEMKKIVLKV
VKQCCATDGVEPQYIKDEILPPFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEIIN
RIVDDLKDEAEQYRKMVMETIEKVMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVML
NGFGMVVNALSKRVKPYLPQICGTILWRLNNKSAKVRQQAADLISKIAVVMKTCQEEKLM
GHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKV
QENCIDLVGRIADRGSEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPH
DVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPGLMNEYRVPELNVQNGVLKSL
SFMFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAMAAIQHIALGVYGFGCEDALVHL
LNYVWPNIFETSPHVVQAFMGAVEGIRVGLGPNKLLQYALQGLFHPARKVRDVYWKVYNT
IYIGAQDAMVPSYPRIANDEKNSYIRYELDYVI
NT seq 4062 nt   +upstreamnt  +downstreamnt
atgcgcgaagacgtcggcagaacgaacaaaatggcggcgactacgcacgaagaaatcgaa
cagcaggttcaggccattcaagcaaaaaaggccaacttgactggccgagatgagagtgag
aaagttgggcttgggatggagggccacttcgacactgacatctacagtggcaaacagagc
aagttcgctggctatgttacatccatcgcacccaatgaagatcaatttgatgatgatgaa
gttcacgacattcaccagtatgggaagaagacgcatcacacagccccgctaaatctcttg
aatgacttgacacaagcagaaaaggaatatgaccctctggctgagcgccgtatcccgcgg
atcgccgaccgggaggatgagtaccgggcgatgcgacgccggatgataatatctccggcg
aggatggatccctttgcagaaggaggcaagacgccagatccgaggaatcaagatcgtaca
tttgtcgacatcatgatggatcgggcccttgatgataaacagaaagcctaccgacaacag
atggcagaaaaggccaagtctggagacttgaaggttatcaacggatcaaaggaagccgag
gcaaaaccctccaaaaggcggcgctgggatcaagcagccgacgacacaccaacagaaaag
aagaagaaatcctcatcgtcatcatcaagttgggatgcggcagaggctggcacaccttca
cagaatcgctgggatgaaacgcccggtcgagcgaaaggtagcgaaacgccgggtgccact
cctggagctagtacgaggatgtgggagacaacgccagggcatgctacgcctggtgcagtc
acccccgggcgtggagatacccctggacatgccacacctggtcatcagggcacccccagt
gccaggaggaaccgatgggatgagacaccaaagacagaacgagagacccctggtcatggc
agcggatgggccgagacacctcgcacagatcgtgtcggtggtggagatcttattgaaagt
acaccaacccccagcgccagcaagcgccgctcccgatgggatgaaacaccagtggcatca
tctggcggcaatgcaacaccaggatcaatgactccaggtggtatgacccctggcggtctc
actcctggtgggttgactcccggaggtctgacgccgggcggcatgactccgacaggattg
accccaagcggcaccacaccagctggcgctaaagcaatgggcatggccacaccgacccct
ggtcacctgatgagcatgacgcctgaacagatgcaggcatacacgtggcagcgagaaatc
gacgaacgaaaccgcccactctcagatgaagagttggaccaaatgttcccacctgggtac
aaggttcttcagccgccacaaggttacgttccaattcgtacgcctgcacgccgtctcact
gcgactccaaccccaatggctgggacacctgtgggattccgcatgcagaccccggataac
aaggtgcagattgtggacatgcagccgaagggtaacctccctatgatgaagccagatgat
atgcagtattttgataaactactggtcgatgtggatgaagagagcctctcccctgaggag
caaaaggagagaaagatcatgaaacttctcctgaaaatcaagaacggtacaccaccaatg
agaaaggcggctctgagacagatcaccgacaaggctcgggaattcggagctgggccactt
ttcaaccagattctgcccttgttgatgtcgccgaccttggaagaccaggagcgccatctc
ttggtgaaagttattgacaggatcctgtataagttggacgacttggtgcgaccgtacgtg
cataagattcttgtcgtgattgagccgttgttgattgatgaagattactacgctcgtgtc
gagggccgggaaatcatctccaacttggcaaaggctgcaggtctggccaccatgatctcc
accatgcgacctgatattgacaacatggatgagtacgtgcgtaacacaacagctcgtgcc
tttgccgtggttgcatcagccctgggtatcccatcgctcctaccattcttgaaggccgtg
tgtaagagtaagaagtcgtggcaggctcgtcataccggtatcaagatcgtacaacagatc
gcaatcctcatgggttgtgctatcctgccgcatttgaagaacttggtggagatcattgaa
cacggcctcgttgacgaacagcagaaagtgcgtaccatcactgcccttgccttggccgcg
cttgccgaagccgccactccttatggtatcgagtcctttgacagcgtcctgaagcctctg
tggcgcggtatccgtcagcatcgtggtaaaggtctcgccgcgttcttgaaggccattggt
tacctcatcccgctcatggatgccgagtatgccaattactatactcgagaggtgatgttg
atcttggtaagggagttccagtcgcctgatgaagagatgaagaaaattgtgttgaaggtg
gtgaagcagtgctgtgccactgatggtgtggagccgcagtacatcaaggatgagatcttg
ccacccttcttcaagcatttctggaaccagaggatggctctcgacaggaggaactacaga
caacttgtggacacgaccgtggagatcgccaacaaggtcggcgcagcagaaatcatcaac
cgcatcgttgacgacttgaaagacgaggcagagcagtaccgtaagatggtgatggagacg
attgagaaggtgatgagtaatctgggtgcggcggatatcgactcccggctcgaggaacag
ttgattgacggcattctgtatgcattccaggaacagacaacagaggatgtcgtcatgttg
aatggttttggcatggttgtgaatgcgctgagtaaacgagtcaagccctacctgccccag
atctgtggtaccatcctgtggcgattgaacaacaagtcggcaaaagtgcgtcagcaggct
gctgacctcatatcaaagattgctgttgtcatgaagacgtgccaggaggagaaactgatg
ggtcacttgggtgtcgtactctatgagtaccttggagaggagtacccagaggtactcggc
agcattctgggcgctctcaaggcgattgtgaacgtgatcggtatgaccaagatgacacca
cccatcaaagatctcttaccgcggctcactcccatcctcaaaaacaggcacgagaaagtc
caagagaattgcattgacttggttggcaggatcgccgatcgtggatcagaattcgtctcc
gctagagagtggatgaggatctgttttgaattgttagaactcttgaaagcacacaagaaa
gccatcaggagagccactgtcaatacgttcggttacatcgccaaggctattggtccacac
gatgtcttggccacacttctcaataacttgaaagtccaggaacgacagaatcgtgtctgt
acgaccgttgccatagctattgtcgccgaaacgtgctcaccgttcacagtgttgcctgga
ctcatgaacgagtatcgtgtgcccgagctgaatgttcaaaatggtgttctgaagtcttta
tcgtttatgtttgaatatatcggtgaaatggggaaggattatatctatgcggtgacacca
cttctcgaggatgctctcatggacagagaccttgtacatcgacagactgccatggcagcc
atccagcatattgccctcggtgtttacggcttcggctgcgaggatgccctcgtccattta
ttaaattacgtctggccgaatatattcgagacgtcacctcatgttgtccaagctttcatg
ggagcggtggaaggcatccgagtcggccttggaccaaacaaacttttacaatatgctttg
cagggtctctttcacccggcaagaaaagtgcgggacgtgtactggaaggtgtacaacacg
atatacattggtgcacaagacgcgatggtcccgtcatatccgcgcatcgcaaacgacgag
aaaaattcatacatccgatacgaactggactatgttatttag

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