Lineus longissimus (bootlace worm): 135501847
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Entry
135501847 CDS
T09977
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135501847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llon03041
]
135501847
Spliceosome [BR:
llon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135501847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
PRP4
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Ge1_WD40
WD_LRWD1
WD40_RFWD3
WD40_like
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_ACSF4
Beta-prop_NWD2_C
cas_Cpf1_2nd
Motif
Other DBs
NCBI-GeneID:
135501847
NCBI-ProteinID:
XP_064650293
LinkDB
All DBs
Position
17:complement(13454313..13459337)
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AA seq
532 aa
AA seq
DB search
MLVKIPAFHNLILCPGAWKPEEDFDKMSDDEGAYVKRAKVVHYGAIDEQIRSRGFTTMGQ
SALDAGIKAGNINVSNSADVMDMEEEIRSSKNELLEEFEKRKRARQIQVSTDDGEVKVNL
RKYGEPICLFGEGPADRRERLRQLLASLGEDVWKKKEAEEKKKEKKDEDNITWYHQGPRS
LQDARHWIAKYSLPKAQLRIQQSRTKKAIPSAQANARTQELQKKIRSLSIECSQIGDNRP
LSFCQFSPNSEMLVTASWSGLCKLWSIPDCEPIRTLRGHNCQVGAIVFHPQASLSMDNSE
CCMASCAQDGSVKLWSLDSDEPIADIEGHAPYRVSRLRYHPSGRFLATCCWDNSWRLWDL
EVAEEILHQEGHSKPVYDIAFQGDGALAVTGGLDAFARVWDLRTGRCIMFMEGHLKSVLS
VDVSPNGYHIATGSEDNTAKIWDLRQRKCVYTIPAHTNIVSGVRFQPETGNYLITASYDN
TVKVWAHPIWTPLKTLAGHGGKVMAIDISPDKQYIASASYDRTFKLWAPETT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgaaaatccctgcatttcacaatcttatcttatgtcccggtgcctggaaaccg
gaggaagactttgacaaaatgtcagatgatgaaggagcttacgtcaagcgtgccaaagtg
gtacattatggtgcaatcgatgaacagattcgaagccgtgggtttactaccatgggccag
tctgccctcgatgctggcatcaaagcaggcaacatcaatgtttccaactctgctgatgtc
atggacatggaggaagaaatcagaagcagtaaaaatgaacttttggaagagtttgaaaaa
aggaaacgggcaagacaaatccaagtttccactgatgatggtgaagtaaaagtcaatcta
agaaaatatggagaaccaatttgtttatttggtgaaggaccagctgataggagagaaaga
ttacgccagttgttggcatcgctaggtgaagatgtctggaagaagaaggaggctgaggag
aagaagaaggagaagaaggatgaggataacatcacatggtatcaccaaggaccccggtca
ctccaagacgctaggcactggatcgctaagtattccctgccaaaagctcagttgaggata
caacaatcacggacaaaaaaagccatcccatctgcccaagccaatgcacgaactcaggag
cttcagaaaaaaatcaggtccttgtcgattgagtgcagtcaaattggtgataaccgacca
ctgtcgttttgccagttcagtcccaacagtgagatgttggtcactgcatcatggagtggc
ctgtgtaaactctggtccataccagattgcgaacctatcaggaccctgagaggccacaat
tgtcaagtcggggccatcgtatttcatccacaagcgagcttatcaatggataattcggag
tgttgtatggcctcttgtgcccaggatgggtcggtcaagttgtggagtcttgacagtgat
gaaccaattgcagacattgaaggccacgctccatacagagtctccagattgagatatcat
ccctcgggacggttcctggctacttgttgctgggacaattcctggagattatgggatctt
gaagtggcagaagaaatccttcaccaggaaggacacagtaagcctgtctatgatatagca
ttccagggagatggagcattggccgtcactggtgggttagatgcgtttgccagagtttgg
gacctacgaactggtcgttgcattatgtttatggaaggtcatctcaagtcagttctttca
gttgatgtctctccaaatggatatcacattgctaccgggagcgaagacaacacagccaag
atttgggacctcaggcagcgaaaatgtgtttacaccataccagcacatacaaacattgtc
tctggagttagatttcagccggaaacagggaactacttgatcacagcatcgtacgataac
actgttaaagtttgggcgcatccaatctggacgccgctaaagacactcgcaggacacgga
ggaaaggtcatggccattgacatctcgccagacaaacagtacattgcatcagcatcgtac
gacaggacattcaaattgtgggcaccggaaactacatga
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