Lineus longissimus (bootlace worm): 135502738
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Entry
135502738 CDS
T09977
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon04140
Autophagy - animal
llon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135502738
04148 Efferocytosis
135502738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llon04131
]
135502738
Membrane trafficking [BR:
llon04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135502738
Hops complex
135502738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
TPR_GEMI5
zf-RING_2
zf-C3H2C3
zf-C3HC4
Beta-prop_EML_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
TPR_11
zf-HC5HC2H
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
135502738
NCBI-ProteinID:
XP_064651834
LinkDB
All DBs
Position
19:complement(1978356..1987990)
Genome browser
AA seq
1081 aa
AA seq
DB search
MAFLQWRRFNFFDKEVLKQQETNQPFDKLKDIIVTGCASGRGQIIVADCEGLIYLVNRQL
EIIAFTAYAIRVSHLTQLKQHNILVTIGEDEVGVNPQIKVWNLDKVDKTGTPTCTRITRA
IPGNQPTPVQSLTVAENLNYMAVGFENGCVLLFKGDVTKDRHSKQRVIHESPRPITGLAF
KTSGSQTVLYVATEYSTMSIVISNKDKDVKNVLDQHGCKVGCSVMSDASQDHQFVIGRSD
AVYFYQPDGRGPCLAFEGEKNLLFWFRGYLIVVGRDTKAMPRSTAQGQSLEMNLVTVYDI
QNKFIAYSALVPEVIDIVSEWGSLYILAGDRKFYHLQEKDTQTKLEMLFKKNLYPVAINL
AKSQQYDRDGLTDIFRQYGDHLYSKGDHDGAITEYIKTIGKLEASYVIRRFLDAQRIHNL
TAYLQALHRAQLATEDHTTLLLNCYTKLKDESKLDAFIMTKDKEHVDFDVETAIKVCRQA
SYYKHALYLAEKHSEHDWYLKIQLEDIRDYQKALKYIGKLDFYAADGNLKKYGKMLMSEV
PKQTTELLKRLCTDYKPSDSPLVDDSNLYGENIPRIQNANADEFIHIFVNNSEKLTEFLE
HMVKVQPNSPSLVYDTLLELYLHDIVHETDISAKTEKEMKTLDLLQNPDAGYDVNQALVL
CQMNDFKSGILYLYEKAKLYQQILRYHIEHNEYTHVIDTCKKFGTMDSGLWVQALAYFSK
REENCKSQIMEVLSHIDKKNLLPPLLVLQTLAHNSTATLAVIKDYITRRLQQENDQIAED
ERLIKQYSVDTEKMRSQIEELKTSAKIFQVTKCSICNEPLELPSVHFLCQHSYHLECFES
YAESDSECLTCMQENRKVMDIIRAQEQSRSLHEQFHHQLETAQDGFAVVADYFGRGVFNK
VTLITDAPSSRSQLPTPPIDPTAQRELLLQQPASRSNQYDPGPAAQPRSQPPARQSPVPK
QQPTTKQPIPSAQPRHQPMKSSPYEARTPPIQQAAQRQPTAPKSTPSPRPSPQPAKSNPF
GSESNTTKPQSKSNPFDAKPVQPVPKASNPFGEASRAKNPFDAGANTNPFGDEEGSSNPF
D
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcttttctccagtggcgtcggttcaacttctttgacaaggaagttctcaaacagcaa
gagacaaatcaaccattcgataaactcaaggatatcatagtgacgggttgtgccagtgga
cgtggtcagatcatcgtcgccgactgtgaggggttaatctatctcgtcaaccgacagcta
gagatcatagcgttcacggcatatgctatccgagtgtcacatctgacacagcttaaacag
cataatattttagttactattggggaagacgaggttggcgtgaatcctcagataaaagtc
tggaatcttgacaaggtcgataagacaggaacaccaacatgtacaagaataacgcgagca
attcctggcaaccagccaacaccagtccaaagtctgacagttgcggagaacttgaactac
atggctgtggggttcgagaatggctgcgttctcctgttcaaaggtgacgtcacgaaggac
cgtcatagtaaacaacgagtcatccatgagagtcctcggccaatcacaggccttgcattc
aagacgtcgggaagtcagacagtcctgtatgtcgcgacggagtatagcacgatgtcgatc
gtcatcagcaataaagataaagatgtcaagaatgtcctcgatcaacatgggtgtaaagtt
ggatgctccgtcatgagtgacgcatcacaggatcatcagtttgtcatcggcagaagtgat
gctgtctatttctaccaacccgacggacgaggaccatgtctcgctttcgagggagagaaa
aacttactgttctggttccgtgggtacctcattgtcgttggccgagataccaaagctatg
cctcgatccactgcccagggccagtcgctcgagatgaacctcgtcacagtttatgacatc
cagaataaattcatcgcatactcggccctcgtgccagaagtaatcgatatcgtgagcgag
tggggttcattatacatcctggctggcgatagaaagttctatcaccttcaagaaaaagat
actcaaaccaaactggagatgttgttcaagaaaaacctctatccagttgctataaacctt
gccaagagtcagcagtatgatcgtgatggcctcacagatatattcagacaatatggagat
catctttacagcaagggtgaccatgatggtgctattacagaatatatcaaaacgatcggc
aaattagaggcttcttacgtgataagacggttccttgatgctcagagaatccacaacctg
accgcgtatctacaggccttacatagagcccagttggccacagaggaccatacgaccctc
ttgttaaactgctacaccaagctcaaggatgagtcaaagttagatgcattcattatgact
aaagacaaagagcatgtcgacttcgatgtagaaaccgccatcaaagtgtgtcggcaagcc
agctactacaagcacgccctctatcttgccgagaagcactcggagcacgactggtacctg
aaaatacaactcgaggacattcgagattaccagaaggcattgaagtacattggaaaactt
gacttttatgctgcggatggtaacctcaagaaatatggtaagatgctgatgagcgaagtc
ccaaagcagacgacagaacttctcaagcggttgtgtacagattataaacctagtgacagt
cctttggttgacgattctaacttgtatggagaaaacattccaagaatccagaacgccaac
gcggacgagttcatccacattttcgtcaacaattccgagaagttgacggagtttttggaa
catatggtgaaggtccagcccaactctcccagtcttgtctacgatactctgctggaactg
tacctccacgatattgtacacgaaacagacatttcagccaaaacggaaaaggaaatgaaa
acgttagacttacttcagaatcctgatgctggctatgacgtcaaccaggctctggtcctg
tgccaaatgaatgacttcaaatccggcatcctttacctctacgagaaggccaagttgtat
caacagatcctccgatatcacatcgaacacaacgagtatactcacgtgattgacacgtgt
aagaagtttggaactatggactcgggcctgtgggttcaagccctggcgtatttctccaag
cgagaagagaactgtaagtcacagatcatggaggtgctgtcgcacatcgataagaagaac
ctcctacctcctctactggtcctgcagacgctcgcgcataactcgacagcaactctcgcc
gttataaaggattacatcacgcgccgcctccagcaagagaacgaccagatcgcagaggac
gaacgcctgatcaaacaatatagcgtcgatacggagaagatgagaagtcagatagaagaa
ctcaaaactagtgccaaaatctttcaagtgaccaagtgtagcatttgtaacgagcctcta
gagctgccgtctgttcatttcctctgtcaacattcctatcatttagagtgttttgaaagt
tatgccgagagtgactcagagtgtctgacctgcatgcaggagaatcgtaaagtaatggac
atcatccgcgcgcaggagcagagccggtcgctccatgaacagttccatcaccaactcgag
acggcacaggatggatttgcagtcgtcgcagattatttcgggagaggcgtgttcaataag
gtgactctcatcaccgatgctccatctagtcgttcccagcttcctacgccacctatcgac
ccgacagctcagcgggaacttctgttgcaacagcctgcctcgaggtccaaccagtatgat
cccgggccggccgcacaaccaaggtcgcaaccgccagctcggcagtccccagtaccaaaa
cagcaaccgacaacaaaacaacctataccctctgctcagccgaggcaccaaccaatgaag
tcaagtccgtatgaagcgaggacgccacctatacagcaagcagcgcaacgtcagccaacg
gcaccaaagtcgactccatcaccaagaccctcaccgcaaccagcaaaatcaaacccgttt
ggttcggagtcgaacacaacaaaaccgcaatcgaaatcaaacccatttgatgcgaagcca
gtgcaacctgtgccaaaagcgtcaaacccgtttggagaggcttcaagggcaaaaaaccct
tttgatgcgggtgccaatacgaacccgtttggtgatgaagaagggagttcaaacccattt
gattga
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integrated database retrieval system
