Lineus longissimus (bootlace worm): 135502908
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Entry
135502908 CDS
T09977
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34-like
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
llon
Lineus longissimus (bootlace worm)
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
llon03016
]
135502908
Enzymes [BR:
llon01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
135502908
Transfer RNA biogenesis [BR:
llon03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
135502908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
135502908
NCBI-ProteinID:
XP_064652166
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All DBs
Position
19:654354..657090
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AA seq
284 aa
AA seq
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MINVVILNSHAFIWNLDDACKVREECRIVGSLVGCLPRAPSQNVQLGLPMQLLPEEATLM
FEKGFATPVEECDIKEKPSKEQVKQYENFMIQHYEEQAEICKVERREEMVALKEKIIEGK
MKKRNKMLEQRKAAGEEVDDAEFEEKIDFDVNTIRIDTIPKSSMLVQTFIDSPWPDIMKP
AEWKFPQTTAEKHRYQIFKDLWEQGNYLTSGSKFGGDFLVYPGDPHLFHSFYIAVCMPYQ
EEFCALDLISKGRLGANVKKTVALCCVDNDCIVKYTSLQWTGMR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgtggttattttgaattcacatgcatttatatggaatttagatgatgcatgc
aaggtccgggaagaatgtcgtattgttgggagcctggtgggatgtctcccaagagcgcca
tcgcaaaatgtccagcttggattgccaatgcagctcttgcccgaagaagccacacttatg
tttgaaaaagggtttgccactccagttgaagaatgtgacatcaaggaaaagccgtccaag
gaacaagtgaaacagtacgagaacttcatgattcaacattatgaggagcaggctgaaatt
tgtaaggtggaacgacgtgaagaaatggttgccttgaaagagaaaataatcgaaggcaaa
atgaagaagagaaataagatgctagaacagaggaaggcagcaggagaagaagttgatgat
gctgaatttgaggagaagattgattttgatgtcaacactatcaggattgacaccataccg
aagtcaagcatgctggtccagacattcattgatagcccatggccagacatcatgaaacca
gctgagtggaaattccctcaaacgacagcagagaaacacagataccaaatcttcaaggat
ttatgggagcaaggaaattatttgacatctgggagtaaatttggcggcgattttcttgtt
tatccaggcgacccccatctcttccactcattctacatcgcagtgtgcatgccgtatcag
gaggagttctgtgcacttgatctcatcagcaaaggacgtctcggagcaaatgtgaaaaag
acggtggcactatgctgcgtggataatgactgcatagtgaaatatacgtctctgcagtgg
acaggcatgaggtga
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