Lineus longissimus (bootlace worm): 135502932
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Entry
135502932 CDS
T09977
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135502932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llon03019
]
135502932
Messenger RNA biogenesis [BR:
llon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135502932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135502932
NCBI-ProteinID:
XP_064652214
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Position
19:12553054..12555870
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AA seq
278 aa
AA seq
DB search
MPIDSRRIFGPEETLDPMTFVTPEEKKLKKESEGNLLVDDLRNDRRKVDQIRPLFLQSGT
ITQAKGSAYIEINNTKVICAVYGPREAVRREDFSMKGQLNCEFKFATFSCPQRRPHQADM
MDKDYSVLLMDALEPAVCLDKYPKSVVDVFVTVLENDGSALAAAITCAAVALADAEIEMY
DVVIGCCLRSIDNHLLLDPTYEEEYKPHVQQARADNSMMTVAYMPSINQVSSIEMKGVAE
IVNLQEGLKLVIRTCQRIYPVIQKCLLDAVKEKLKESS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctatagatagcagacgtatttttggtccggaggaaactcttgatccgatgacattt
gttacaccagaagaaaaaaaactgaaaaaagaatctgagggaaaccttttagtggatgat
ttgcgcaatgatcgccgaaaagtggaccaaatcagaccactgtttttgcaatctggaaca
atcacacaggcaaaaggatcggcttacattgaaatcaacaacacaaaagttatatgtgca
gtgtatgggccacgggaagccgtaagacgagaagacttcagcatgaagggacagctcaat
tgtgaattcaagtttgcgacgttttcctgtccgcaacgccggccgcatcaggcggacatg
atggataaagactattcagttctgttaatggatgcgttagagccggccgtctgcttggac
aaatatcccaaatctgttgtcgatgtgttcgttacagtcttggagaatgacggaagtgcc
ctagctgctgccataacttgtgctgcggtcgccctcgcagacgccgagattgaaatgtac
gatgttgtaataggatgctgtctacgctcgattgataatcacctcctcctggacccgaca
tatgaagaagaatataaaccacacgtgcaacaggctagggctgataacagcatgatgacg
gtggcctacatgccgtcaatcaaccaggtctcttccatagagatgaagggagtagcagaa
atagtcaacctacaggaggggttgaagcttgtcattaggacctgccagcgcatctaccct
gtcatacagaaatgtcttctcgacgctgtgaaagaaaagttgaaggaatcttcctag
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