Lineus longissimus (bootlace worm): 135503009
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Entry
135503009 CDS
T09977
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
llon
Lineus longissimus (bootlace worm)
Pathway
llon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135503009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llon03400
]
135503009
DNA repair and recombination proteins [BR:
llon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135503009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
GD_AH_C
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
135503009
NCBI-ProteinID:
XP_064652331
LinkDB
All DBs
Position
19:complement(686832..695381)
Genome browser
AA seq
1366 aa
AA seq
DB search
MSQQKSLFSFFSPKSKTELATNNNNNVVEAKGHTTPPKPKQPECGFQVGDLVWAKLEGYP
WWASMVCNHPTKEIFHQPGIRPEIHVQFFDDPPTRGWVQSKYVKPFVGLDNIDCRAGGLF
FCRDQQQQTGATECNNAMAMSREDRLAMVLDILSEDEEEEEDMEVEKMEFDKDLFDDEAD
SDADNSKENREESPKKTPGKTPRKNGRPTRPKAKRRKILVESGGEDDSADEFKVEPGEEQ
SESDDSSSGVDENEVSDMEGSDTESPRKKTGKRKRDGKGSVSTPNKPTESLKKFFTPVSS
GKSSVATPVANNETKPLTNGNSSAASTPTMKSTPVTPVVNSATKSKLAAFSAPNSSPNPT
AVGEDDSGIVYTHYTLDFIKPDKLKDAKGRPKGHEDYDPKTLLVSGDFLRGLTPAMRQWW
ELKSQHFDTVLFFKVGKFYELYHMDAVTAVNELGLIYMKGNHAHSGFPEIAYGRYADILV
QKGYKVARIEQTESVDAMQERCKQKKNSTKFDKVVRREICRITTKGTKTYSFIDGNPSDN
QNAYLLSVVEKSHDDTSGGGCMYGVCFIDTSIGKFHIGQFEDDRHCSRFRTLVAHFTPVQ
VIYEKGKLSQKTWTFINSNLISVIKEQLTPKEFWDGSKTLKCLSEEKYFQDEEKAGEFEW
PSALKKMISDSDTLGHTPGDNYQLAMNALGGIVSYLRMSYLDIELLSMKNFEEYVPIDRA
SASKVKSSVFRSGQHMVLDGVTLANLEVVANSTTGTREGTLIDRLDQCSTPFGRRLFKQW
LCTPLCNPYAINERLDAVEDLMNNQDVVSEVTDILKKLPDLERLLSKIHTLGSATRSKEH
PDGRAVFFEDLKYSKRKIEDFLDTLNGFKLSLQAMKLFKKCVTSFKSKLLKQTVGIKTSS
NSEGRFPDISGDLQFFDDSFDHNKARQDGKILPNHGVDPEYDGALVEISTAKVELDDYLK
KQKQRLGCKTLTYWGSGKNRFQIEVPDSVSKNVPHQYELKSQKKGYKRYWTDDIEDLFSV
MTTAEDRRDVALRDVMRRIFYAFDKKYKMWETVIQCLSVLDVLINLSAYSRCGDGMMCRP
DVISPDEDTRPFIEIREGRHPCISRTFSGGDFIPNDTVVGTKDENDEDTKGNTDSSVVLV
TGPNMGGKSTLMRQVGLIVITAQLGCYVPAEKCCLTPVDRVFTRLGASDRIMAGESTFFV
ELSETSAILQHATQHSLVLMDELGRGTATYDGTAIACAVVNELSQNIRCRTLFSTHYHSL
VEEFSHDPNIRCGHMACMVENENEEDPSQETITFLYKFIKGECPKSYGFNAARLADLPEE
VIAVARRKAKEFEEAQNRMKVFRMLRKLKEFSADNIKNLQNQICVA
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcagaaaagtttattcagcttttttagccctaaatccaaaacagaacttgct
accaacaataataacaatgtagttgaagctaaagggcatactacgccccctaaacccaaa
caaccagagtgtggcttccaagtgggagaccttgtgtgggccaagttggaggggtacccc
tggtgggcgtcgatggtatgtaatcacccgaccaaggagatattccaccagcccggaatc
cggcccgagattcacgtccagttctttgatgatcctccaaccagaggttgggtccaatcc
aagtatgtgaagccattcgttggtttggacaacatcgactgtcgtgccggcggcttgttc
ttctgtcgcgaccaacagcagcagacaggtgcgaccgaatgcaacaacgccatggcgatg
tcgcgggaggatcgcctggcgatggtcttggatatactgtcagaggatgaggaggaagaa
gaagacatggaagttgaaaagatggaatttgataaagatctttttgatgatgaggcggac
tcggatgctgacaacagtaaagagaaccgagaagaatctccgaaaaagacgccagggaag
acgcctagaaagaatggccgccctacacgaccaaaggctaagaggagaaagatcctcgtg
gaatctggtggagaagacgactctgctgatgagttcaaggttgaacctggcgaagagcaa
agcgagtctgatgactcaagtagtggggtggacgagaatgaggtctcagacatggagggg
tctgatacagaatctcccaggaagaaaactggcaagagaaagcgcgacggcaagggaagt
gtgtcaacccctaacaaacccaccgaaagtctcaagaaattcttcactcctgtctccagt
ggtaaaagctcggtagcgacaccagtggcgaataatgaaactaaacctctcaccaatgga
aatagttctgccgcgtcgacgccaacaatgaagagcacaccggtgacacctgtggtgaac
agtgcaactaaatcgaagttggctgcattctcggcaccgaactctagcccaaatccaaca
gcagtaggagaggacgacagtggaatagtttacacacattacaccttggacttcatcaag
cctgacaagctcaaggacgccaaaggaagaccaaaaggccacgaagactatgatccgaag
acactacttgtttccggtgactttctgagaggtttgacacctgcgatgcgccagtggtgg
gaattgaagagtcaacactttgacacggtcctcttcttcaaagttggcaagttctacgag
ctgtaccatatggatgctgtgacggccgtcaacgagcttggtctcatttatatgaaggga
aaccacgctcattccggtttcccggagatcgcctacggtcgctacgcagacatcttggtg
caaaaaggttacaaggtcgcacgcattgagcagacggaatctgtggacgccatgcaagaa
agatgtaaacaaaagaaaaactcgacgaaatttgacaaagttgtccgtagggagatttgc
cgtatcacaacaaagggcacaaaaacatacagctttatcgacgggaatccttcagacaat
cagaacgcgtatttgttatctgtcgtcgagaagtcacatgacgatacgtctggtggtgga
tgtatgtacggtgtctgtttcattgacacttccattggaaaattccacatcggccagttt
gaggacgatcgccattgctcgagattccgtactttagtcgcgcatttcacaccagtgcaa
gtgatttatgaaaaagggaaactctcacagaagacatggacatttatcaattcaaatttg
atttccgttataaaggagcagctcactccgaaggagttttgggacggatcgaaaacgttg
aaatgtttgtcggaggagaagtatttccaggatgaggagaaagctggagagtttgaatgg
ccgtctgctctcaagaagatgatctcggacagtgacacccttggtcacacccctggggat
aactaccaattagccatgaatgccttgggagggatcgttagctacctgaggatgagttac
cttgacattgagcttctctcaatgaagaactttgaggagtatgtcccaattgatcgagcg
tctgcttcaaaggtcaagtcgagtgtctttagaagcggacaacatatggtgctagatggc
gtcaccttggcgaatctcgaggtcgtggcgaactcaacaacaggaacgcgtgaagggaca
ttgattgatcgactcgaccagtgctcaactccatttggaagaaggctcttcaaacaatgg
ctgtgcacccctctttgtaatccgtacgccatcaacgaacgtcttgatgctgtcgaggac
ctgatgaataatcaggatgtcgtgtcggaggtcacagatatcctgaagaagctaccggac
ttggagaggttgctaagcaagatccacacactcggctctgcaacgagaagcaaagaacat
cccgatggtcgggctgtcttcttcgaggatctcaaatacagcaaacgaaagatcgaggat
ttcctcgacacgttgaatggcttcaagctgtctctccaagccatgaaactgttcaagaag
tgtgtcacatctttcaagtcaaagctcttgaagcagactgttggcatcaagaccagttca
aactcggagggacgtttccctgatatatcaggagatctgcagttctttgatgattccttt
gatcataataaagccaggcaagatggaaagattctgccaaatcacggggtcgacccggaa
tacgacggagcactggtggaaatcagcacagcgaaggtagaattggatgattacttgaag
aaacagaagcagagactaggatgcaagactctgacctactggggttcagggaaaaaccgt
ttccaaattgaggtgccagactctgtgtcgaagaacgttccccaccaatacgagctgaag
tcacaaaagaagggctacaaacgatattggacggatgatatcgaggatctgttcagcgtg
atgacgacagcagaggaccggcgtgatgtggccctgcgagatgtgatgaggaggattttc
tatgcttttgataagaagtacaagatgtgggagacagtcatccagtgcctgtctgtcctg
gatgtcctcatcaacctgtctgcgtacagccgttgtggtgatggtatgatgtgtagacct
gatgttatcagtcctgatgaggacacaaggccatttatcgagatcagggaagggcgtcac
ccctgcatttcgaggaccttctctggcggagatttcatccccaatgacacagttgttggg
accaaggatgaaaatgatgaggataccaaagggaacacggacagcagcgttgtcttggtt
acgggaccaaacatgggtggcaagtcgactttgatgagacaagtcggtctgattgttatc
acggctcagttgggttgctatgtaccggctgagaagtgttgcctgacacctgttgataga
gtattcacacgtttgggagcatcggacagaattatggcaggtgagagtacgttttttgtt
gaattgagtgagacgtctgccatcctccaacacgccacgcagcattccttggtcctcatg
gatgagctgggacgaggtacggccacctatgatggcaccgcaatagcatgtgcagtcgtc
aacgaactctcgcagaacattcgatgcaggacgttattctcgacgcactatcattcgttg
gttgaggaattctcgcacgatccgaatataagatgtggtcatatggcatgcatggttgag
aatgaaaatgaggaagacccgagtcaggagaccatcacattcttgtacaagttcatcaag
ggcgagtgtccaaagagttacggcttcaacgcggcgaggttagccgacctgcctgaagag
gtcatcgctgtagcgaggaggaaggctaaggagtttgaggaagcacagaataggatgaaa
gtgttcaggatgctgcgaaagcttaaagaattctcagcagacaacatcaagaatctccaa
aaccagatctgtgtcgcatga
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integrated database retrieval system
