Litorivicinus lipolyticus: GH975_00535
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Entry
GH975_00535 CDS
T06278
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
llp
Litorivicinus lipolyticus
Pathway
llp03420
Nucleotide excision repair
llp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GH975_00535 (uvrD)
03430 Mismatch repair
GH975_00535 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llp03400
]
GH975_00535 (uvrD)
Enzymes [BR:
llp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GH975_00535 (uvrD)
DNA repair and recombination proteins [BR:
llp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GH975_00535 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GH975_00535 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QGG79121
UniProt:
A0A5Q2QA33
LinkDB
All DBs
Position
complement(109922..112111)
Genome browser
AA seq
729 aa
AA seq
DB search
MTHPLIEGLNPGQSDAVSAPESNLLVLAGAGSGKTRVLVHRVAWLMDVYEVSPYSIMAVT
FTNKAAKEMQGRLQQLTQQPLRAMWVGTFHGLCHRWLRSHWQEAGLDQNFQVLDSDDQQK
VVKRIIQRLNLDDKKFPPRTAVNFINSQKDEGCRAAHVQARGDYFNDRLIDIYATYEEEC
EAKGLVDFGELLLRAHETLRDNVELLNHYRARFQHILVDEFQDTNKVQYAWLRLLTGTSG
HIMAVGDDDQSIYGWRGAQVENIRSFVQDFADVATVRLTRNYRSTANILNAANAVIDNNT
GRMGKELWTEDNDGEPLKLYSAFNEQDEARFIADTVQRHVDDGNLRSDVAVLYRSNAQSR
ALEEAFLRSGVPYRIYGGQRFYERLEIKNALCYLRLILNRFDDVAFDRVVNIPPRGIGEK
TLETVRHAARDQGMALWQAAKFCIESAALPARARTQLGAFLALIDQLDSGTEGLELGDVT
REVLGAAQLIEYHGAEKGEKARTRVENLKELASAMADFVPEEDENALAAFLAQASLDAGD
RQADEHDDAVQMMTLHSAKGLEFPVVFLAGCEEGLFPHKMSMDDPDGLEEERRLAYVGIT
RAEKKLYLTHAETRRLYGMDSMSPRSRFLREIPPELVEEIRMNAKITRPLSASDGRLHRG
AKRNDAPWISLDAGVDIGLSLGQRVEHRLFGEGVILKFEGSGPQTKVTVNFAGKGTKTLI
AAYANLTGL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacccactgatagaaggcctcaaccctggccaatccgacgccgtttcggcccct
gaatctaacttgttggtattggccggcgccggctccgggaaaacccgggtgctggtccac
cgggtcgcctggttgatggacgtctacgaagtctcgccgtattcgatcatggccgtgacc
tttaccaataaagccgccaaggaaatgcagggccgcctgcagcaactgacccaacagccg
ctgcgggcgatgtgggtgggtacctttcatggactgtgccatcggtggctgcgatcgcac
tggcaagaagccggcttggaccaaaattttcaagtgctcgacagcgatgaccagcaaaaa
gtggtcaagcgcatcatccaacgcctgaacttggacgacaaaaagttcccaccgcggacc
gcagtcaactttatcaacagccaaaaagacgaaggctgccgtgctgcccacgttcaagcc
cgcggcgactatttcaacgatcgcttgatcgatatctacgcgacctatgaagaagagtgc
gaagccaagggtctggtcgactttggcgagttgctgttacgtgcccacgaaaccttgcgt
gacaatgttgagttgctgaaccattaccgggcccgctttcagcacattttagttgacgag
ttccaagacaccaacaaagttcagtacgcgtggctgcgcctgttaaccggcactagcggg
catattatggcggtcggtgacgacgaccagtcgatttacggatggcgtggggcgcaggtc
gaaaacatccgcagcttcgtccaggattttgccgatgtcgccacggttcgcctgacccgc
aactaccgctcgaccgcgaatatattgaatgcggccaacgcggtgattgataacaacacc
gggcgcatgggcaaagaactgtggaccgaggacaacgacggcgagccgcttaaactgtac
agcgcatttaatgaacaggacgaagcgcgctttatcgccgacactgtccagcgccatgtt
gatgacggcaatttgcgctccgatgtggccgttctgtaccgctccaatgcccagtcgcga
gccctcgaagaagccttcttgcgcagcggcgtgccttaccggatctatggtggccagcgt
ttctatgaacgcttggagatcaaaaatgcgctgtgctatttgcgcttgattctgaaccga
tttgacgacgtcgcctttgatcgcgtggtcaacatcccgccgcgcgggatcggtgagaaa
accctggaaaccgtgcgccacgccgcccgtgaccagggcatggcgctgtggcaagcggct
aagttctgtatcgaaagtgccgcactgccggcacgcgcacggacccaactgggcgcattt
ttggccctgatcgaccagctcgacagtggcaccgagggtttggagttgggcgacgttacc
cgcgaggtgctgggtgcggcgcaactgattgaataccacggcgcggaaaagggtgaaaaa
gcccgcacgcgggtcgagaacttgaaggaattggcctcggcgatggcggatttcgtgccc
gaggaagatgaaaacgccctggcggcgttcttggctcaggcgtcgttggatgccggtgat
cgtcaagccgatgagcacgatgacgcggtccaaatgatgacgctgcacagtgccaagggc
ctggagtttcccgtggtgttcttggccggctgtgaggaaggcttgtttccgcacaaaatg
tcgatggacgatccggacggcctcgaggaagagcgacgactggcgtatgtcggtatcact
cgggctgaaaaaaagttgtacctgacgcatgccgaaacgcgccgcctgtacggcatggac
agcatgtcaccgcgttcgcgcttcttgcgtgaaatcccgccggagctggtcgaagaaatt
cgtatgaacgcaaaaataacgcgtccactcagtgccagcgatggacgactgcaccgcggt
gccaagcgcaacgatgcgccttggatcagcctggatgcgggggtcgatattggtttgagt
ttgggtcaacgcgtcgagcaccgcttgttcggcgagggcgttattttgaagttcgagggc
agcgggccacagaccaaggtcacggtcaattttgccggcaaaggcaccaagacgttgatc
gcggcgtacgccaatttaaccgggctttaa
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