Litorivicinus lipolyticus: GH975_05020
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Entry
GH975_05020 CDS
T06278
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
llp
Litorivicinus lipolyticus
Pathway
llp03030
DNA replication
llp03430
Mismatch repair
llp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GH975_05020 (dnaE)
03430 Mismatch repair
GH975_05020 (dnaE)
03440 Homologous recombination
GH975_05020 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llp03032
]
GH975_05020 (dnaE)
03400 DNA repair and recombination proteins [BR:
llp03400
]
GH975_05020 (dnaE)
Enzymes [BR:
llp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GH975_05020 (dnaE)
DNA replication proteins [BR:
llp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GH975_05020 (dnaE)
DNA repair and recombination proteins [BR:
llp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GH975_05020 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QGG79973
UniProt:
A0A5Q2Q9U0
LinkDB
All DBs
Position
976734..980201
Genome browser
AA seq
1155 aa
AA seq
DB search
MSFVHLRVHSDYSLSDGLCRVKKLPGQIKDRGMPAVALTDNANLFAMVKFYNGCVGAGIQ
PIMGADVLWGDSHETASALTLLVQSQAGYLRLSEWLTAGFLQHQKNGKVLLPTDLLAAGT
DGLIALSGGIKGSVGMALMKGDADEAAGAASQLTALFPNRFYLEISRCGRSHEETVLHQT
VALADQLGLPLVATNDVRFFNQGDFEAHETRVCIASSFTLDDPRRERQFTDQQYLKSADE
MCALFADVPDAIENTLAIAKRCGFQPKLGTYFLPDYPVPDGKTIDQYFRELSHDGLGDRL
AKILPADPTESAALEKTYRNRLDFEVDVILQMGFPGYFLIVMDFINWAKSNGVPVGPGRG
SGAGSAVAWALRITDLDPIEYDLLFERFLNPERVSMPDFDVDFCMVGRDRVIDYVAQRYG
RNAVSQIITYGSMAAKAVVRDVARAQGKAYAVGDKLSKLIPFEVGMTLEKALEQEPGLNE
LMSMDEDAAEVMAMSRQLEGTIRGVGKHAGGVVIAPSKLTDFVPVYQPEGEDSPVTQFDK
DDVESAGLVKFDFLGLRTLTIIDWALDLIRDSGADVPDIESIPLDDRRTFKLLQGAETTA
VFQLESRGMKDLIRRLQPSTFADIIALVALYRPGPLESGMVDDYINRKHGREPVVFPHPD
LEPILKDTNGVILYQEQVMQIAQVLAQYSLGSADLLRRAMGKKKPEEMQKQRVMFMQGSG
ERDVDPQLAGSIFDLMEKFAGYGFNKSHSAAYALVSYQTAWLKTHYPAAFMAAVMSADMG
DVDKVVPLIEEARRMGLAVNPPDVNQGALKFTVNDDGAVVYGLGALRGLGEGPISALLDA
RADGPFSDLFDFCRRVDGTRINKRAIESLIKAGAFDGLNEPRHLLMGALESAMGAANQAR
KSEAAGMQDLFGLGMDSAPDPSTGGDAYVDVRKARVWNERERLAAEKHTLGLYLTGHPIE
AHRGEIREFSITEIGRLRPSREGRPRTAGLIIAIRTLRDRSNRPLAIVTLDDRSARFELV
LAGDTFEQYKDALVTDQIVVVEGKVSLDERNQTNKMQVDRLWTLTQARMAFADALEIRFA
VDQVPATMKKRLHDILAPQRGGGCPVQFRISGREADGVVKLGHGWDVHPTDELMLQLTEV
FGDTAVRLRKEERYA
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttcaccttcgtgtccattccgattactccttaagcgacggattgtgccgc
gttaaaaagctgccaggccagatcaaagaccgcggcatgccggcggttgcgctgacggac
aacgctaacttgtttgccatggtcaagttctacaacggctgtgtcggtgcgggtattcaa
ccgatcatgggcgccgacgtgttgtggggtgatagtcacgaaaccgccagcgccttgact
ttgctggtgcaaagtcaggccggctacttgcgcctgtccgagtggctgacagcgggattc
ttgcagcaccagaaaaacggcaaggtattgttgcccacggacttgttggcggccggcacc
gacggcctgattgcgctgtccggcggcatcaagggcagcgtcggcatggccctgatgaag
ggcgatgcggatgaggcggccggcgccgccagccaactgacggcgctgtttccaaaccgc
ttttacttggaaatctcccgttgcggtcgcagccacgaagagaccgtattgcaccagacc
gtggccttggccgaccagctaggcttgccattggtggcgaccaacgacgtgcgctttttc
aatcaaggcgactttgaggcccacgagacgcgggtctgcattgcctccagctttaccttg
gatgacccgcgccgggagcgtcaatttaccgatcagcagtacctcaaatccgccgacgag
atgtgcgcgctgtttgccgacgtgccggacgcgattgaaaataccctggcgatcgccaaa
cgctgtgggttccagcccaaattgggcacctacttcctgcccgattacccggtgccggac
ggcaagaccatcgatcagtactttcgcgaactgtcccacgacggcctgggcgaccggcta
gccaagatactgccagccgacccgaccgaatcggcggcgctcgaaaagacctatcgcaat
cgcttggacttcgaggtcgacgtgatcttgcagatgggttttcccggctacttcttgatc
gtcatggattttatcaactgggccaaaagcaatggcgtgccggtcggccccggacgtggg
tccggtgccggcagcgcggtggcctgggcgctgcgcatcacggatttggatccgatcgaa
tatgatttgttgttcgagcgattcctgaatcccgaacgggtatcgatgcccgactttgac
gtcgacttttgcatggtcgggcgcgaccgggtcattgattacgtggcccagcgctacggg
cgtaacgcggtctcgcaaatcattacctacggctcgatggcggctaaggccgtcgtgcgc
gacgtcgcccgtgcccaaggcaaggcctatgcggtcggcgataagctgtcgaaattgatt
ccgttcgaagtcggtatgacgctggaaaaagcgctggagcaagagccaggcctcaacgaa
ttgatgagcatggacgaggacgcggccgaggtcatggccatgtcgcgccagcttgaaggc
accatccgtggggtcggtaaacacgccggcggcgttgttattgcaccgtccaagctgacc
gatttcgtgccggtctaccagcccgagggtgaagacagtccggtcactcagttcgacaaa
gacgacgtcgaatccgcagggttggtcaaatttgactttttgggcctgcgcaccctgacc
attatcgattgggcgctggacttgattcgcgactccggtgccgacgtgcccgatatcgag
agcattccgctggacgaccgacggacctttaagttgttgcagggcgcggaaaccaccgct
gtgttccagcttgaaagccgcggcatgaaagatttgatccgccgcctgcaaccctcaacc
tttgccgacatcatcgccttggtggcgctgtaccgtcccggcccgctggaatcgggcatg
gtcgacgactatatcaaccgtaagcacggccgcgagccggtcgtgttcccgcacccggac
ttggagccgatcctcaaggacaccaacggggtcatcctgtaccaagaacaggtcatgcag
attgcccaggtgctggctcagtacagcctgggcagtgcggatttgttgcgccgcgccatg
ggcaagaaaaagcccgaggaaatgcaaaagcaacgcgtcatgttcatgcaaggctcgggc
gagcgcgatgtggacccgcagttggcgggttcgatctttgatttgatggaaaagttcgcc
ggctatggctttaacaagtcgcactcggccgcctacgcgttggtgtcgtaccaaaccgca
tggctcaaaacccattacccagcggcctttatggcggcggtcatgtcggctgacatgggc
gacgtcgacaaggtggtgccgctgattgaagaggcgcggcggatgggcctggcggtcaac
ccgccggacgtcaatcagggcgcgcttaagtttaccgtcaacgatgacggcgccgtggtc
tacgggctgggtgcgctgcgtggattgggcgaaggcccgatttcggcgttgctggatgcc
cgcgcggacggcccgttctcggacttgtttgatttctgtcgccgtgttgatggcacccgc
attaacaagcgcgcgatcgagtcgttaatcaaagccggcgcgttcgatggcctcaacgag
ccacgtcacctgttgatgggggcgctggaatccgccatgggcgcggctaaccaggcgcgt
aaatccgaggcggcgggcatgcaagacctgttcggtttgggcatggacagcgccccggac
ccaagcaccggcggcgatgcctacgtcgacgtgcgcaaggctcgggtgtggaatgaacgc
gagcgcttggcggcggaaaagcacacccttgggctgtacctgacgggacacccgatcgaa
gcgcatcgtggcgagattcgcgagttttcgatcacggaaattggccgcctgcggcctagc
cgggaagggcgaccgcgcaccgccggattgattattgcgattcggactttgcgggatcgc
tcgaaccggccgttggccattgtgacactcgacgatcgcagtgcgcgctttgaattggtg
ctggcgggtgacaccttcgagcagtacaaagacgccttggttacggaccagattgtggtg
gtcgagggcaaggttagcttggatgagcgcaaccaaaccaacaaaatgcaggtcgaccgg
ctgtggaccctaacccaggctcgtatggcctttgccgacgccctggagatccgatttgcg
gtcgaccaggtgccggccacgatgaaaaaacgcctgcacgacatcttggcccctcaacgt
ggcggcggatgtccggtacaatttagaattagcggccgtgaggccgatggggtggttaag
ttaggccatggctgggacgtccaccccaccgatgaattaatgctgcagttaaccgaggtg
tttggcgacacggcggtgcgactgcgcaaagaggagcgatacgcgtga
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