Litorivicinus lipolyticus: GH975_07040
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Entry
GH975_07040 CDS
T06278
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
llp
Litorivicinus lipolyticus
Pathway
llp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GH975_07040 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llp03400
]
GH975_07040 (recD)
Enzymes [BR:
llp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GH975_07040 (recD)
DNA repair and recombination proteins [BR:
llp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GH975_07040 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
RecD_N
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
SH3_13
AAA_22
UvrD-helicase
AAA_16
PhoH
SLFN-g3_helicase
NTPase_1
AAA_28
TrwB_AAD_bind
T2SSE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QGG80337
UniProt:
A0A5Q2QEB0
LinkDB
All DBs
Position
complement(1391609..1393441)
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AA seq
610 aa
AA seq
DB search
MNLVHLEAWHDSGFLSALDWQFAAAMQRLQPAWSAELVTLAALCSRQAARGHTLLDLRAL
KASPSRVLGEGDGHPLCAWAAAAAWDEASLVDQCGPMGPLVVADGCLFLRRHYDDEAHIQ
HYLSARLADRYPVDAQSVATAVAVLFGEAEGTATDWQRVACLVSLEAAFSLITGGPGTGK
TTTVVRLLALIQHMAMAQQGVPQRIGLAAPTGKAATRLAESIAKQVAGMDFTGLAPGVRA
SLPSSADTLHRLLGLSSAQPRGRYADAAKLPLDWLIVDEASMIDLRLMARIVDSLGPDTR
LVLLGDPDQLASVEAGAVLGQLTASSAPAAFEPAQCARLEALGAGPVEVAGAAPSGMGAV
WAHLKVSHRFDHRSGIGALAKAVNQGHGEHAWTLFEEFADIDLTPDMSVAVERCVQRTAD
MIEQSRDERDPGWPRACVDRLSEFQVLAAVRAGAGGVMVFNQAVEHALVARFGRSEIAQW
YVGRPVIMTRNQPNLGVMNGDLGLCLPRAVDGVERLQVAMVANGVLRWFPLSAMQGVETV
YAMTVHKSQGSEFAESALLWPRDRSGLLTRELVYTAITRARRRFQLVGADPTEFARACSR
RVNRVGRLKG
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggtccacctagaggcgtggcacgacagtggctttttaagcgcgctggattgg
cagtttgccgcggctatgcaacgactgcagccggcctggtcggcggagctggtgaccttg
gctgctttgtgtagccgccaagccgcgcgcggccacactctattagatttgcgtgcgctc
aaggccagccccagccgcgtgctgggcgagggcgacgggcaccccctgtgcgcgtgggct
gccgctgccgcctgggatgaggcgtcactggtggaccagtgcgggccgatggggcctttg
gtcgtggcggatgggtgtttgtttttgcgccgtcattacgacgatgaagcccacattcaa
cattacctgagcgcgcgccttgctgatcgttatccggtcgatgcccagtccgttgccacg
gcggtcgcagtgttatttggtgaggctgaggggacggctacggattggcaacgggtcgcc
tgtttggtatccctggaggcggcgttttcattgatcaccggtgggccgggtaccggcaaa
acgaccacggtggtgcgcttgttggctctgattcagcacatggccatggcacaacagggt
gtgccgcagcggataggtctagcagctccgaccggaaaggcggcaacgcgtttggctgag
tcgattgccaagcaggtcgcgggcatggacttcactgggttggcaccgggtgtccgagcg
agcctgcctagttcggcggacacccttcaccgcttactggggctgtcgtcggctcagccg
cgcgggcgctacgcggatgccgccaagttgccgctggactggttgatcgtcgatgaagca
tcaatgattgacctgcgcctgatggcgcgaattgtcgacagcttgggcccggacacgcga
ctggtgttgctgggggacccggaccagttagccagcgtcgaggccggtgcggtgctgggt
caactgaccgcgtcgtcggcgcctgcggcgtttgagcctgctcagtgcgcgcgactggag
gcgttgggtgccgggcctgttgaggtggcgggcgcggcgcccagcgggatgggcgcggtc
tgggcgcatttaaaagtcagtcatcgcttcgaccaccgctccggtatcggcgccctggct
aaggccgttaaccaggggcatggggagcacgcgtggaccttgttcgaggagtttgccgat
attgacctgaccccggatatgtcagttgcagttgagcgctgtgttcagcgcacggcggat
atgatcgagcagtcgcgcgatgaacgcgacccgggctggccgcgagcgtgcgtcgatcgt
ctgtccgagtttcaggtgttggcggcagtgcgtgccggggccggcggcgtaatggtgttc
aaccaggcggtcgaacacgccttggtggcgcgctttggacgatcggagatcgctcagtgg
tacgtcggccggccggttataatgacgcgtaatcaaccgaatttgggcgtgatgaacggg
gatttggggctgtgtttgccgcgtgcggtcgacggtgtcgagcgcttgcaggtcgcgatg
gtggcgaacggtgtgttgcgctggttcccgctatcggccatgcaaggcgttgaaaccgtg
tatgcgatgacggtgcataagtcccagggcagcgaatttgccgagtcggcattgctgtgg
ccgcgcgatcgaagtgggctgttgacgcgggaactggtgtacaccgcaattacgcgcgca
cgccgtcgctttcaactggtcggtgcggatcccactgaatttgcacgcgcctgctcgcgc
cgggtcaaccgggttgggcgtctgaagggttag
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