Litorivicinus lipolyticus: GH975_08445
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Entry
GH975_08445 CDS
T06278
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
llp
Litorivicinus lipolyticus
Brite
KEGG Orthology (KO) [BR:
llp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llp03400
]
GH975_08445
DNA repair and recombination proteins [BR:
llp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
GH975_08445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
SWI2_SNF2
AAA_30
Helicase_RecD
Cas3-like_C_2
AAA_22
SLFN-g3_helicase
Zn_Ribbon_1
zf-TFIIIC
DZR_2
DZR
Motif
Other DBs
NCBI-ProteinID:
QGG80597
UniProt:
A0A5Q2QF20
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All DBs
Position
1674564..1676237
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AA seq
557 aa
AA seq
DB search
MILRPRQKMFVKRCLSALEKHDNTLGVAPTGAGKTIMLSGVAGRWIQGTQAKVCVLAHRD
ELTEQNASKFKRVNPNIETSVFDAKGKSWKGQTTFAMVQTLSRESNLAQMPTLDLLVIDE
AHHVAAPSYRAIIEQAQKLNPSLKLFGVTATPNRGDGKGLRPVFSNVADQISLAELIQSG
HLVPPRTFVVDVGTQLALSEVKCSADDFDMHEVDAIMNRKVITEAVVKHWQTHAGKRKTV
VFCSTVDHANNVANAFRQVDVNSVVVHGALTKAERESALAQFATGQAQVIVNVAVLTEGW
DHPPVDCVVLLRPSSYKSTLIQMIGRGLRTIDPEEYPGVSKTDCIVLDFGTSTLMHGSLE
QEALLDGHQGSGKAPTKTCPDCDAEVPLSSMECALCGHVWERTTDSEKTELTEFVMSEVD
LLKRSSFRWSDLFGDDTALMATGFSAWAGVFYLNGQWFAVGGGKGLGTHLLSIGERSLGI
AAADDWLNEHENEAAARKSRTWLSQSVTQQQLKYLPAGYQQDFGLTRYQASCLITFRFNK
RAIQTRIFAAVKTQEAA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgattcttcgtccccgtcaaaaaatgtttgttaagcgctgtctctcggcgctcgagaaa
catgacaacactctgggagtggcaccaaccggtgctggcaaaaccatcatgctctcgggt
gttgcgggacgatggatccagggtactcaggccaaagtgtgtgtcctagctcaccgtgac
gaactcaccgagcagaatgcctccaagttcaagcgagtaaacccgaatatcgagacatct
gtctttgatgcgaaagggaagtcctggaaggggcaaaccacctttgcaatggtgcaaaca
ctctctcgcgagtccaatctggcgcagatgccaaccttggatctgctcgtcatcgatgaa
gctcaccacgtggcagcacccagttaccgcgccatcattgaacaggcccaaaaactcaat
ccaagcctgaagctcttcggggtaaccgcaacacccaatcgaggagacggcaaaggacta
cgtcctgtattcagcaacgttgctgatcaaattagtcttgctgagcttattcaatccggt
cacttggtacctcctcgtacctttgtggtggatgttggcactcaactcgcactctcagag
gtgaagtgctcagctgacgatttcgacatgcatgaggtcgacgccattatgaatcgcaag
gtcattaccgaagcggtcgtaaagcattggcagacacatgctggcaaacgcaaaacggtg
gtgttctgctctacggttgatcacgccaataacgttgcgaacgcctttcgacaagtcgat
gtaaacagcgtggttgttcacggcgccctgaccaaggctgagcgagagtctgcgcttgcg
cagtttgccacgggccaagcacaggtcattgttaacgtcgcagtactcaccgagggctgg
gatcacccaccggtagattgcgtggtattgctacgcccgagttcatacaagtcgactctg
attcagatgattggccgagggcttcgcactatcgatcctgaagagtatcccggagtcagt
aagaccgactgcattgtgttggacttcggcaccagcaccctcatgcacggatcgctagaa
caagaggccctgctcgacggtcatcagggctctggcaaagctccaaccaaaacctgtcca
gactgcgatgctgaggtgccgctctcttctatggagtgcgcactgtgcggccatgtttgg
gagcgcacaaccgatagtgagaaaaccgaactcaccgagtttgtcatgtctgaagtcgat
ctactcaagcgttcctcattccgctggagtgatctctttggcgatgacacagcccttatg
gcgacaggcttttcggcatgggcaggtgtgttttatctaaacggtcaatggttcgctgtc
ggtggcggaaaagggctgggaacgcacttgctctcgatcggcgaacgctcacttggcatc
gctgcagccgacgattggctcaacgagcatgaaaacgaggcggcggctcgcaagtcccgc
acctggctgagccaaagtgtcactcaacaacaactcaaatacctgcctgcaggataccaa
caggacttcggactgacacggtatcaggcatcgtgcctgatcactttccgctttaacaaa
cgagccattcaaacacgcattttcgcggcagtcaaaacacaggaggctgcctga
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