Lactococcus lactis subsp. cremoris A76: llh_12070
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Entry
llh_12070 CDS
T01965
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
llr
Lactococcus lactis subsp. cremoris A76
Pathway
llr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
llh_12070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llr03021
]
llh_12070
03400 DNA repair and recombination proteins [BR:
llr03400
]
llh_12070
Enzymes [BR:
llr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
llh_12070
Transcription machinery [BR:
llr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
llh_12070
DNA repair and recombination proteins [BR:
llr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
llh_12070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
AEU41590
LinkDB
All DBs
Position
complement(2224895..2225833)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPKITKFDESENYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIQIEGVQ
HEFATIPGVREDVIQIVLAVKGIAIKSYVESEKQIELDVTGPMDVTAGDILTDSDIEIVN
KDHYLFSIAEGHSMRAVMTVKKGYGYVPADENKVDGAPIGTIAVDSIYTPVSKVNYQVEP
ARVGGDSSYDKLTLEITTNGTIVSDEALSLSAKILTDHLNLFVDLSEVAAEAETLVVKDE
VKTERVLDKIIEEMDFSVRAYNGLKRAGINTIADIVEMSEADMIKVKNLGHKSVEEVKVK
LTELGLSLKKRK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaaaaattactaaatttgacgaatcagaaaattacggtaaa
ttcgttgttgaaccacttgaacgtggttatggtacaactttaggtaactctctgcgtcgc
gtccttttgtcatcacttcctggtgctgctgtgacttcaattcaaattgaaggtgttcaa
cacgaattcgcaacaatccctggcgtacgtgaagatgtcatccaaatcgttcttgcggtt
aaaggaattgccatcaaatcatacgttgaatctgaaaaacaaatcgaacttgacgttact
ggtcctatggatgttactgctggtgatatcttaactgatagcgacattgaaattgtcaac
aaagaccattacttgttctctattgctgaaggtcactcaatgcgtgctgtaatgactgtt
aaaaaaggatacggctatgttccggctgacgaaaataaagtcgatggagcgccaattggc
acaattgctgtagactcaatttacacaccagtaagtaaagtaaattatcaagttgaacct
gcccgtgttggtggagattctagctacgataaattaacacttgaaattactacaaacggt
actatcgtttctgacgaagctttgtcactctcagctaaaatcttgacagaccacttgaac
ttgttcgttgatctttcagaagttgcagctgaagctgaaacacttgttgttaaagatgaa
gttaaaacagaacgtgtgctcgataaaattattgaagaaatggacttctcagttcgtgct
tacaatggtttgaaacgtgcaggtatcaacactattgctgatattgttgaaatgagcgaa
gctgacatgattaaagtcaaaaacctcggtcacaaatcagtagaagaagtcaaagttaaa
ttgactgaattgggactttcccttaaaaaaagaaaataa
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