Lactococcus lactis subsp. cremoris A76: llh_12345
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Entry
llh_12345 CDS
T01965
Name
(GenBank) DNA polymerase III alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
llr
Lactococcus lactis subsp. cremoris A76
Pathway
llr03030
DNA replication
llr03430
Mismatch repair
llr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
llh_12345
03430 Mismatch repair
llh_12345
03440 Homologous recombination
llh_12345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llr03032
]
llh_12345
03400 DNA repair and recombination proteins [BR:
llr03400
]
llh_12345
Enzymes [BR:
llr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
llh_12345
DNA replication proteins [BR:
llr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
llh_12345
DNA repair and recombination proteins [BR:
llr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
llh_12345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
DEDDh_C
HHH_3
Rv2179c-like
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AEU41645
LinkDB
All DBs
Position
complement(2261901..2266808)
Genome browser
AA seq
1635 aa
AA seq
DB search
MENLFEKLMDQIKMPPNLRRSRQFEHADIENVEVHTASKLWHFQLIFDEILPIDTYKLLT
ELTETAFSTIARTEISVSSREIVIDEQNLNDYYQYALTLPELCDSAFSSIFKKYHLELQE
EKIQLMVEDNPRMDFFVEKYFPILEEKFADFGFGKLKIIPVVDQQLTDLQVAAHAEKVAA
RLAAQTAEQAQVSELKKQRSEERESKNTREAKPEFVETALSDGIFFGRKISGQSPITSMS
FIAGEGFGVIFEGLVFEAAHREFAGKESGKVNHILELKMADETSTFMISKWGRKDEEIAQ
FDQIVSTVKAMNEKILTDGADNFTDSLSDALWLRVQGNIEHDKYKDDLVMTANAVVEIKP
KPTIDRVALQIKAVKSDKIQLGREIKNNEPVTPMRSVSEFSTNGPVVFEGYVFKGELREI
KSRKTGNISYLLEFEMTDYTSSFYVQKWLRGEEEIQLAKQIKAGLWCRVRGNVQRDNFKN
DLVLQLTDLIEIPTQNVREDKSDEKRVEFHAHTNMSQMDAIPSASSLVAQAAKWGHKAIA
ITDHGGLQSFPEAHSAGKKNGVKIIYGVEANLVEDKIPIVFNETDVDMYESTYVVFDVET
TGLSAVHNDLIQIAATKMHKGNPIDEFDEFINPGYRLSEFTTELTGITDDHVKNAKPLYE
VLTKFQKFCEGTILVAHNASFDVGFMNMNYSRNGLPIISQPVVDTLEFARNLYPEMKRFG
LGQLTKKFQIGLEHHHMANFDAEATGRLLFVFLEELRTRNTGWISLLELNAKLVSEDSYK
KVRPKHVTLYAKTQEGLKNLFKIVSFGNVKYYAGLPRLPRSVLEANREGLLVGSACEVGE
VFDAAINKTFEETLEIAKFYDFIEVFPPALYRSLVVGGSFKSEKELEQTLKDLIKIGKTL
VKPVLATGNLHYLNPEDAIYREIIVRSLGLGAEINWTQGHGEHAKPLPLPEAHFRTTDEM
LEAFSFLDEKTAREIVIDNTQKMADEFDVLTPVRDDLYTPKMVFDGGETSEERIVRLTYE
KAHEWYGNPLPDIIDARLEKELRSILGNGFSVVYIISQELVKRSNERGYIVGSRGSVGSS
LVATMIGITEVNPLAPHYRCPECQYFECYDDGSFGSGYDMPDKNCPKCDHKLIKDGHDIP
FETFLGFKGDKVPDIDLNFSGDDQPLAHLDVRDIFGEDYAFRAGTIGTVAEKTAFGFVKG
YERDYDQFYGNAEIDRLAAGSTGVKRTTGQHPGGIIVIPNYMDVYDFSPVQFPADDVNAE
WQTTHFDFHAIHDNILKLDILGHDDPTMIRKLQSLSGIVPQDIPMDDPGVMKLFTGTESL
GLTEEQLGVKLGTLGIPEMGTFTSMNMIAEAKPKNFADLLQISGLSHGTDVWSGNAQDLI
RSGIADLSSVIGCRDDIMVYLIHKGLENGLAFTIMERVRKGMWNKIPAEEREKYVEAMRE
HEVPEWYIESCSKIKYMFPKAHAAAYIMMALRVAYFKVHHPIFYYCAWFSIRATAFDIGV
MGAGLEAVKSKMKEIKDKGFEATNVETNLYTTLELCNEMLERGFTFGKIDLYRSEATEFV
IDGDTLIPPFVTMDGLGENVAKQIVAARAEGEFLSKMELRKRGGVSQTIIENMTNMGVLE
GMPDDNQLSLFDDFF
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctttttgagaaattgatggatcagatcaaaatgccaccaaacttgcgtcgt
tctagacagtttgagcatgctgatattgaaaatgttgaagtgcatacggcaagtaagctc
tggcactttcagttaatttttgacgagattttaccaattgacacatataaattactgaca
gaattgacagagacagctttttctacaatcgctcgtacagaaatttctgtcagtagccgt
gaaatagtcattgacgagcaaaaccttaatgattattatcaatatgcgctgacacttcct
gaactttgtgattctgctttttcaagtatttttaagaaatatcatcttgaattgcaggaa
gaaaaaattcagttgatggttgaagataatccacgaatggacttttttgttgaaaaatac
tttccaattttagaagaaaaattcgcagattttggtttcggaaaattaaaaattattcca
gtggttgatcaacaattaaccgacttacaggtggctgctcatgccgaaaaagtagccgct
cgcttggccgctcaaacggcagagcaagctcaagtttcggagcttaaaaaacaacgctca
gaggaacgtgaaagtaaaaatactagagaagccaaaccagaatttgtagagacggcactt
tctgatgggattttctttggtcgaaaaattagtggacaaagtccaattaccagtatgtct
ttcatcgctggggaaggctttggggttatctttgaaggtcttgtttttgaggccgcacat
cgcgaatttgcaggaaaagaatcaggtaaagtcaatcatattttagaattgaaaatggct
gatgaaacatcaacctttatgatttccaaatggggtcgtaaggacgaagaaattgcacaa
tttgaccaaattgtcagcaccgttaaagccatgaatgaaaaaattcttactgacggagcg
gataattttactgacagcctatctgatgccctttggttacgtgtgcaaggaaatattgaa
cacgacaaatataaagatgacttagtaatgacggcaaatgcggttgttgaaattaaacct
aaaccaaccattgaccgtgtggctctccaaatcaaagctgtaaaatcagataaaattcaa
ctgggtcgtgaaatcaaaaataatgagccagtcactccgatgcgttctgtcagtgaattt
tctactaacggtcctgttgtttttgaaggttatgtcttcaaaggggaactccgcgaaatc
aaatcacgtaaaacaggaaacatcagttatcttcttgaatttgaaatgactgattacacg
tcaagtttttatgtgcaaaagtggttacgtggcgaagaagaaattcaattggccaaacaa
attaaagcgggactatggtgtcgagttcgcgggaatgttcaacgggacaatttcaaaaat
gatttagtgctacaattgactgatttgattgaaattccgacacaaaatgttcgtgaagat
aagtctgatgaaaaacgtgttgagtttcatgcccatactaatatgagtcaaatggacgcg
attccgtccgcttcaagtttagttgctcaggctgcaaaatggggacataaagccattgca
attactgaccatgggggcttgcaatctttccctgaggctcactcggcaggtaaaaagaat
ggggtcaagattatttatggagtcgaggccaatcttgtcgaagacaaaatcccaattgta
tttaatgaaacagatgttgatatgtatgaatcaacatatgtcgtctttgacgtcgaaaca
acaggtctttcagcagttcataatgatttgattcaaattgcagcaacaaaaatgcacaaa
ggaaatcccattgatgaatttgatgaatttattaatccgggttatcgtttaagcgaattt
acaacagaactaaccggaattactgatgaccatgtcaaaaatgcgaaaccgctttatgaa
gtactgacgaaatttcaaaaattttgcgaaggaacaattcttgtcgctcataatgcatcc
tttgacgtgggcttcatgaatatgaactattcacgaaatgggctgccgattattagtcaa
cctgtcgttgatactcttgaatttgcccgtaatctctatcccgaaatgaaacgttttggt
ttaggacaattgaccaagaagtttcaaatcggacttgaacatcaccatatggccaatttt
gatgcggaagcaactgggcgtttgctctttgtattcttggaagaattacggaccagaaac
acagggtggataagtctgttagaacttaatgccaagttggtcagtgaagattcttataaa
aaagtacgaccaaaacacgtgactttatatgctaaaacacaagaaggacttaaaaatctc
ttcaagattgttagttttggaaatgtgaaatattatgctggtcttcctcgtcttcctcgg
tcagttttggaagccaatcgcgagggattacttgttggttcagcttgtgaagtcggcgaa
gtcttcgatgcagcgattaataaaacttttgaagaaacgcttgaaattgctaaattttat
gatttcattgaagttttcccaccagcactttatcgctcacttgttgtcggcggctctttc
aaatcagaaaaagaattggaacaaacgcttaaagatttgataaaaatcggaaaaacgctt
gtcaagccagttctggccacaggaaatctccattatctgaatccggaagatgccatttat
cgtgaaattattgtccgctcacttggtcttggggcagaaattaactggacacaaggacac
ggggagcatgcaaaacctcttccattacctgaagctcactttagaacaactgatgaaatg
cttgaagcctttagttttcttgatgagaaaacagcgcgtgaaattgtcattgacaatacc
caaaaaatggctgatgagttcgatgttctcactcctgttcgtgatgatttatatacacct
aaaatggtctttgacggaggagaaacctcagaagagcggattgttcgcttgacttatgaa
aaagcccacgagtggtatggaaatccattgccagatattattgatgcaaggcttgaaaaa
gaactgcgatcgattttggggaatggtttctcagtcgtgtatattatttcgcaagaactt
gtaaaacgttccaatgagcgcggatatattgttggttctcggggatcagtaggttcgtca
ctggttgcgaccatgattggaataaccgaagtaaatccactggcacctcattaccgttgc
ccagaatgtcaatattttgaatgctatgatgatggatctttcggttcaggttatgatatg
ccggataaaaattgtcctaaatgtgaccacaaactcatcaaagatgggcatgatattcct
tttgaaactttcttaggtttcaagggagacaaagttcccgatattgatttgaacttttca
ggggatgaccaacctttggctcacttggacgttcgtgatattttcggggaagattacgct
tttcgggcaggaacaattggtacggttgccgaaaaaacggcttttggtttcgtcaaaggc
tacgaacgtgactatgaccaattttatggcaatgctgaaattgaccgtttagctgccgga
tcgacgggtgtcaagcgaacaacaggtcaacacccaggagggattattgttattccaaat
tacatggatgtttatgatttttctccagttcaatttccagccgacgatgtcaatgccgaa
tggcaaacgactcactttgatttccatgccattcatgataatatcttgaaactcgatatt
cttggacatgatgatccaacgatgattcgaaaattgcaaagtctttctggtattgttcct
caagacattccgatggatgaccccggagtgatgaaacttttcaccgggacagaatcttta
ggtttgaccgaagagcaattgggagtaaaactcgggactcttggaattcctgaaatggga
acttttacctcaatgaatatgattgccgaagccaaacccaaaaactttgctgatttactg
caaatttctggactttcccatggaacagacgtatggtcaggaaatgcccaagatttaatt
cgttcaggaattgccgacctttcaagtgttatcggttgtcgggatgatattatggtctat
ctcatccataaaggacttgaaaatggtcttgcttttacaattatggagcgtgtacgtaag
ggaatgtggaataaaattcctgccgaagaacgtgagaaatatgtggaagccatgcgagaa
catgaggttccagaatggtatattgagtcttgttctaagattaaatatatgttccctaaa
gcccatgcggcagcttatattatgatggctctgcgggtggcttatttcaaagtacatcat
ccaattttctattactgcgcatggttctctatcagggcaacggcctttgatattggtgtc
atgggggctggtcttgaagcagtcaaatcaaaaatgaaagaaattaaggataaaggtttt
gaggctacaaatgtggaaactaacctttatacaactttggaactctgtaatgaaatgtta
gagcgtggcttcacttttggtaaaattgacctttaccgctctgaggctacggagtttgtc
attgacggtgacactttgattccgccatttgtaacgatggacggattgggtgaaaacgtg
gcaaaacaaatcgtcgcagcgcgtgctgagggtgaatttttgagtaagatggaacttcgt
aaacgtgggggagtttcacaaaccattattgaaaacatgaccaatatgggcgttcttgaa
ggtatgcctgatgataatcaattaagcttatttgatgatttcttttga
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